Jatropha Genome Database
- JcCA0257171.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0257171.30 + phase: 0 /TE
(1274 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 446 e-125
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 438 e-123
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 426 e-119
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 426 e-119
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 402 e-112
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 399 e-111
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 379 e-105
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 373 e-103
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 372 e-103
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 367 e-101
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 358 1e-98
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 266 6e-71
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 227 3e-59
IMGA|Medtr7g045780.1 Retrotransposon gag protein chr07_pseudomol... 209 6e-54
IMGA|Medtr7g123950.1 Retrotransposon gag protein chr07_pseudomol... 197 4e-50
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 192 1e-48
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 187 2e-47
IMGA|Medtr5g086570.1 Ty1/copia-element polyprotein, related chr0... 187 2e-47
IMGA|Medtr5g086720.1 4D11_12, related chr05_pseudomolecule_IMGAG... 166 6e-41
IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H... 165 1e-40
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 155 1e-37
IMGA|Medtr3g019580.1 Retrotransposon gag protein chr03_pseudomol... 155 1e-37
IMGA|Medtr7g126870.1 hypothetical protein chr07_pseudomolecule_I... 153 6e-37
IMGA|Medtr6g069740.1 Zinc finger, C4-type chr06_pseudomolecule_I... 141 2e-33
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 135 1e-31
IMGA|Medtr3g080970.1 Retrotransposon gag protein chr03_pseudomol... 101 3e-21
IMGA|Medtr8g005190.1 Integrase, catalytic region, related chr08_... 95 2e-19
IMGA|Medtr3g068700.1 Polynucleotidyl transferase, Ribonuclease H... 89 2e-17
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 87 6e-17
IMGA|Medtr1g137300.1 TIR-NBS-LRR type disease resistance protein... 84 7e-16
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 77 4e-14
IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related ... 75 2e-13
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 75 3e-13
IMGA|Medtr3g079600.1 Polynucleotidyl transferase, Ribonuclease H... 74 7e-13
IMGA|Medtr3g083340.1 Integrase, catalytic region, related chr03_... 73 7e-13
IMGA|Medtr3g083290.1 Integrase, catalytic region, putative chr03... 68 2e-11
IMGA|Medtr5g032700.1 Polynucleotidyl transferase, Ribonuclease H... 68 3e-11
IMGA|Medtr5g007330.1 Integrase, catalytic region, related chr05_... 67 8e-11
IMGA|AC137826_20.1 hypothetical protein AC137826.21 78161-79047 ... 65 2e-10
IMGA|Medtr6g036540.1 Zinc finger, CCHC-type chr06_pseudomolecule... 62 2e-09
IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H... 60 7e-09
IMGA|CU179634_23.1 hypothetical protein CU179634.6 85266-85502 H... 60 9e-09
IMGA|Medtr5g029040.1 LTRGag-pol-polymerase 3, related chr05_pseu... 59 1e-08
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 57 5e-08
IMGA|Medtr1g102740.1 gag-pol polyprotein, related chr01_pseudomo... 54 5e-07
IMGA|Medtr6g077060.1 RNA-directed DNA polymerase (Reverse transc... 54 5e-07
IMGA|Medtr4g157500.1 polyprotein-like, putative chr04_pseudomole... 53 8e-07
IMGA|Medtr6g086670.1 gag-pol polyprotein, related chr06_pseudomo... 52 1e-06
IMGA|Medtr1g102780.1 gag-pol polyprotein, related chr01_pseudomo... 52 2e-06
IMGA|Medtr6g038710.1 Integrase core domain containing protein, r... 52 2e-06
IMGA|Medtr5g076530.1 Polynucleotidyl transferase, Ribonuclease H... 52 2e-06
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 262/776 (33%), Positives = 423/776 (54%), Gaps = 48/776 (6%)
Query: 18 DPLNLTNSDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYE 77
DP + +S++ V+ L G NYHSWS + AL KNK F++G P+ +
Sbjct: 17 DPYFVHSSENSSTVSVTPQLTGENYHSWSMKMRRALAMKNKYKFVDGSIPIPDEDDLNRP 76
Query: 78 KWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSF 137
W R +++V +W++NSIS IA + ++ A ++W++L R+ + + Q+ +EI++
Sbjct: 77 AWERCNNLVHTWIINSISPSIAHSVVFIEHAIDMWNDLKDRFMRGDRIRVAQLHQEIANL 136
Query: 138 SQGNYSITVYFTKLKQKWDELASLKKFPVCSCG------AAKFFMDFENDSRLMQFLMGL 191
QG++ IT YFT+L+ W+EL + P C+C A + F + R++QFL+GL
Sbjct: 137 KQGDHKITDYFTELRGLWEELDQYRPMPQCTCPMPCTCLAMRNAKGFRAEDRVIQFLIGL 196
Query: 192 NDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQRE---MNHFTVESSESSAILLAQGNSG 248
N+ Y V +Q+LLMDP+P IN+ +S+V++ E++ + ++H S E + L+ N G
Sbjct: 197 NEEYQGVASQVLLMDPMPPINRVFSLVMQQERKLQYAVVSHVQNTSLEDNTGLVNAVN-G 255
Query: 249 YKKRNFKDSKNNYKRRESTGKENQ----FCDNCRTKGHTRETCFKIVGYP-YWYYELKQK 303
K+ +Y+ R FC C HT ETC+K GYP W +
Sbjct: 256 QKQFGRGRGGTSYQGRGRGNGRGNGNGRFCTFCERTNHTVETCYKKHGYPPNW----GRG 311
Query: 304 KGQSQAHIVDNAGETPFDVQNENSKGPTAEWSEN----LTKIIQQEVMKAMKGKQMMTVT 359
G S ++VD D +++ + G T+ EN LTK Q +M ++ + T
Sbjct: 312 GGNSYTNMVDAE-----DTESKINMGSTSRNDENAGITLTKDQYQNLMSLLEKNNLETKC 366
Query: 360 DENVYVNNCSFTGTASNKVFKGTDDK-NIGEWIIDTGCTDHMTYNISFFDTLHKLAKPKS 418
NV + S + S + D K N WI+DTG T H Y++++F + K+ + +
Sbjct: 367 SANVVKGSNSISLFESKSLLASFDSKQNDPGWIVDTGATHHTCYDLNWFTSYSKI-ETIN 425
Query: 419 VKLPDGAIKLVHYIGTIKLNDRIILTNVLYIPSFKCNLISVTSLTKTNKIAVKSLPNCSI 478
V LP+G++ YIG +KL+ + + NVLY+P F NLISV+ L + ++ + I
Sbjct: 426 VNLPNGSVIEACYIGQVKLSKDLSIDNVLYLPKFAVNLISVSKLCREQNCKLEFEADICI 485
Query: 479 FQDLQSNEKIAIGHEQDGLYLLNKKSFDIVSSKCMTTCTE-NSRKIQNFKLWHSRLGHVS 537
Q+ + KI + E+ GLY L + VS ++ E + + + + LWH RLGH+S
Sbjct: 486 IQEKNTLRKIGLAKEKHGLYYLETDERNKVSVSNISAQVELHQKHVPDGVLWHLRLGHLS 545
Query: 538 NQRL-------RYAGVLDHDELCDIVCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWG 590
+ R+ Y V H C +C + +Q +PFP + ++ F L+H D+WG
Sbjct: 546 HDRMICMNKMYSYVPVSPH-----TACDVCQMCRQKILPFPISSRNAKTAFDLVHFDIWG 600
Query: 591 PYGVQSITGAKFMVTIVEDKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTD 650
P+ S+ G K+ +TI++D +R+ W+ M+ K + + +++ ++E QF K++ +R+D
Sbjct: 601 PFSTTSVHGHKYFLTILDDCTRHVWIVMLKNKSEASYQVKNFVSMVERQFERKIKMIRSD 660
Query: 651 NGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFW 710
NG EF+ R+ + KGI+HQRS +YTPQQNG VER+H+ +L I+RA MFQ PKNFW
Sbjct: 661 NGPEFM---LREFYDKKGIIHQRSCVYTPQQNGRVERRHQHILNISRALMFQSKLPKNFW 717
Query: 711 SECLLAATHVINRIPTVVLDWKSPYEELNGKPPDISYFRTIGCLCLATN--TNPYK 764
S +L A ++INRIPT +L+ KS YE L + PD+S + GCL A+ N YK
Sbjct: 718 SYAVLHAVYLINRIPTKILNNKSSYEVLYNEVPDLSSLKVFGCLSYASTLPVNRYK 773
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 259/759 (34%), Positives = 413/759 (54%), Gaps = 37/759 (4%)
Query: 25 SDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDS 84
SD P ++ L+ +NYHSW+RS+ AL AKNK DF++G P P ++ W R +
Sbjct: 35 SDGPSSVAITPVLSHSNYHSWARSMRRALGAKNKFDFVDGSIPVPTDFDPNFKAWNRCNM 94
Query: 85 MVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYSI 144
+V SW++NS+ IA++ ++ +A ++W+EL +R+ + + ++ EI S Q + S+
Sbjct: 95 LVHSWIMNSVEDSIAQSIVFLENAIDVWNELKERFSQGDFIRISELQCEIFSLKQDSRSV 154
Query: 145 TVYFTKLKQKWDELASLKKFPVCSCG----AAKFFMDFEND---SRLMQFLMGLNDSYDH 197
T +FT LK W+EL + PVC+C M+ ++ +R ++FL GLNDS+D
Sbjct: 155 TEFFTALKVLWEELEAYLPTPVCACPHRCMCITGVMNAKHQHEITRSIRFLTGLNDSFDL 214
Query: 198 VRNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGNSGYKKRNFKDS 257
VR+QILLM+PLP+INK +SMV++ E+Q ++ ++ +S+ ++ + G S + R +S
Sbjct: 215 VRSQILLMNPLPTINKIFSMVMQHERQFKI---SIPVEDSTILVNSAGKSQGRGRGNGNS 271
Query: 258 KNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYPYWYYELKQKKGQSQAHIVDNAGE 317
+N KR C C GHT + C++ G+P Y K + + I N
Sbjct: 272 NSNGKRS---------CSFCGRDGHTIDICYRKHGFPPNYGN-KNFAKVNNSSIEQNEER 321
Query: 318 TPFDVQNENSKGPTAEWSENLTKIIQQEVMKAMKGKQMMTVTDENVYVNNCSFTGTASNK 377
D E S +TK ++++ ++ +Q + +V N +G +
Sbjct: 322 EDLDDSKSCKGNSNTEPSFGITKEQYEQLVTLLQSQQASSSKVNLSHVTNHVTSGIT--R 379
Query: 378 VFKGTDDKNIGEWIIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIKL 437
+ + G WI+D+G +DH+ +I FFD+ + P +KLP+G + + + GT+
Sbjct: 380 TSYTMNHSSFGTWIVDSGASDHICSSIKFFDSYAPII-PVHIKLPNGNMAIAKFSGTVNF 438
Query: 438 NDRIILTNVLYIPSFKCNLISVTSLTKTNKIAVKSLPNCSIFQDLQSNEKIAIGHEQDGL 497
+ +I NVLY+ FK NL+SV L N V + QD + + +G +GL
Sbjct: 439 SPGLIARNVLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELIEGL 498
Query: 498 YLLNKKS-----FDIVSSKCMTTCTENSRKIQNFKLWHSRLGHVSNQRL----RYAGVLD 548
Y LN S F+ ++ + ++ + LWH RLGH+SN RL ++ +
Sbjct: 499 YFLNLGSQVFSQFNHQPVIALSQSSSSTTFLPQEALWHFRLGHLSNDRLLRMQQHFPCIK 558
Query: 549 HDELCDIVCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSITGAKFMVTIVE 608
D + VC IC S+ ++PF ++ K+ ++LIH D+WGP SI G K+ +T ++
Sbjct: 559 VDS--NSVCDICHYSRHKKLPFKLSMNKASHCYELIHFDIWGPISTHSIHGHKYFITALD 616
Query: 609 DKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKG 668
D SR+TW+ + TK +V + +++ IE QF KV+ VRTDNG EFL D + SKG
Sbjct: 617 DYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL---MPDFYSSKG 673
Query: 669 IMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLLAATHVINRIPTVV 728
I HQ S + TPQQNG VERKH+ +L +ARA +FQ PK FWS +L A ++INRIPT +
Sbjct: 674 IEHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKIFWSYSVLHAIYIINRIPTPL 733
Query: 729 LDWKSPYEELNGKPPDISYFRTIGCLCLATNTNPYKQNF 767
L KSPY G PD++ F+ GCL A+ + ++ F
Sbjct: 734 LQNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKF 772
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/759 (32%), Positives = 407/759 (53%), Gaps = 62/759 (8%)
Query: 52 ALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKEL 111
AL AKNKL FING ++P + W R + ++ SW++NS+S IA+ ++ + A ++
Sbjct: 4 ALGAKNKLAFINGTIQQPEALDLNRAAWERCNHLIHSWIINSVSDSIAQTIVFHDYASDV 63
Query: 112 WDELFQRYGDSNGPLLYQITREISSFSQGNYSITVYFTKLKQKWDELASLKKFPVCSC-- 169
W++L +R+ ++ + + I++ QG +++ YFT+++ W+EL S + P CSC
Sbjct: 64 WEDLKERFSKADRIRISTLRSSINNLKQGGKTVSEYFTEMRSLWEELNSHRPLPNCSCVH 123
Query: 170 ----GAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQR 225
A+ + + ++MQFL+GLND + V+ QILLMDPLPS+NK YS+V+ Q
Sbjct: 124 QCRCEASTLAHVYRVEDQIMQFLLGLNDQFSVVKTQILLMDPLPSLNKVYSLVI----QE 179
Query: 226 EMNHFTVES--SESSAILLAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHT 283
E NH + S +E S IL+ N+ K+++ K Y ++++ + FC+ HT
Sbjct: 180 ESNHTPILSLPTEESNILV---NATDSKKSYGRGKGYYGNQKNSSRHCTFCNR---SNHT 233
Query: 284 RETCFKIVGYPYWYYELKQK---KGQSQAHIVD-----NAGETPFDVQNENSKGPTAEWS 335
+TC+ G+P+ G + + V+ N + D +S + +
Sbjct: 234 IDTCYLKHGFPHPNKSANSNTLTHGSTNSVTVESGNTSNTQQGNGDSSGYSSFSISQDRY 293
Query: 336 ENLTKIIQQEVMKAMKGKQMMTVTDENVYVNNCSFT----GTASNKVFKGTDDKN-IGEW 390
E+L ++QQ + + +V++ N + S + + F + N I W
Sbjct: 294 EHLVSLLQQATL--LPTAVSPSVSNSNQLTTSQSIPLATYQSGIHSAFSCSFHVNSIPSW 351
Query: 391 IIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIKLNDRIILTNVLYIP 450
IID+G DH+ ++ + F + +K+ KP V LP+G VHY G + + LT+VLY P
Sbjct: 352 IIDSGANDHVCFSKTHFTSFYKI-KPVLVTLPNGTSIYVHYAGNVHFTPYLHLTHVLYSP 410
Query: 451 SFKCNLISVTSLTKTNKIAVKSLPNCSIFQDLQSNEKIAIGHEQDGLYLLN--------- 501
FK NLISV+ + + +V + N + QD+ S I +G + DGLY L+
Sbjct: 411 EFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLSMHFVNQQLQ 470
Query: 502 -KKSFDIVSSKCMTTCTE-------------NSRKIQNFKLWHSRLGHVSNQRLRYAGVL 547
SF + +K + S +I LWH RLGH+SNQRL L
Sbjct: 471 LHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSNQRLSTMSRL 530
Query: 548 DHDELCD--IVCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSITGAKFMVT 605
+ D C IC ++ ++PFP + + + FQL+H D+WGP + + G K+ +T
Sbjct: 531 YPSIIVDNKAACDICHFARHKKLPFPHSSSHANSKFQLLHFDIWGPLAINYVHGHKYFLT 590
Query: 606 IVEDKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQ 665
IV+D +R+ W+ ++ +K +V + +++ LIE QF + + +RTDNG+EFL D +
Sbjct: 591 IVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEFL---LHDFYA 647
Query: 666 SKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLLAATHVINRIP 725
SKGI+HQRS + TPQQNG VERKH+ +L I RA ++Q P +FWS L A +INR+P
Sbjct: 648 SKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRVP 707
Query: 726 TVVLDWKSPYEELNGKPPDISYFRTIGCLCLATNTNPYK 764
T+VL +SPY+ L PD++ F+ GCLC A++ ++
Sbjct: 708 TLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHR 746
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/759 (32%), Positives = 407/759 (53%), Gaps = 62/759 (8%)
Query: 52 ALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKEL 111
AL AKNKL FING ++P + W R + ++ SW++NS+S IA+ ++ + A ++
Sbjct: 4 ALGAKNKLAFINGTIQQPEALDLNRAAWERCNHLIHSWIINSVSDSIAQTIVFHDYASDV 63
Query: 112 WDELFQRYGDSNGPLLYQITREISSFSQGNYSITVYFTKLKQKWDELASLKKFPVCSC-- 169
W++L +R+ ++ + + I++ QG +++ YFT+++ W+EL S + P CSC
Sbjct: 64 WEDLKERFSKADRIRISTLRSSINNLKQGGKTVSEYFTEMRSLWEELNSHRPLPNCSCVH 123
Query: 170 ----GAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQR 225
A+ + + ++MQFL+GLND + V+ QILLMDPLPS+NK YS+V+ Q
Sbjct: 124 QCRCEASTLAHVYRVEDQIMQFLLGLNDQFSVVKTQILLMDPLPSLNKVYSLVI----QE 179
Query: 226 EMNHFTVES--SESSAILLAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHT 283
E NH + S +E S IL+ N+ K+++ K Y ++++ + FC+ HT
Sbjct: 180 ESNHTPILSLPTEESNILV---NATDSKKSYGRGKGYYGNQKNSSRHCTFCNR---SNHT 233
Query: 284 RETCFKIVGYPYWYYELKQK---KGQSQAHIVD-----NAGETPFDVQNENSKGPTAEWS 335
+TC+ G+P+ G + + V+ N + D +S + +
Sbjct: 234 IDTCYLKHGFPHPNKSANSNTLTHGSTNSVTVESGNTSNTQQGNGDSSGYSSFSISQDRY 293
Query: 336 ENLTKIIQQEVMKAMKGKQMMTVTDENVYVNNCSFT----GTASNKVFKGTDDKN-IGEW 390
E+L ++QQ + + +V++ N + S + + F + N I W
Sbjct: 294 EHLVSLLQQATL--LPTAVSPSVSNSNQLTTSQSIPLATYQSGIHSAFSCSFHVNSIPSW 351
Query: 391 IIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIKLNDRIILTNVLYIP 450
IID+G DH+ ++ + F + +K+ KP V LP+G VHY G + + LT+VLY P
Sbjct: 352 IIDSGANDHVCFSKTHFTSFYKI-KPVLVTLPNGTSIYVHYAGNVHFTPYLHLTHVLYSP 410
Query: 451 SFKCNLISVTSLTKTNKIAVKSLPNCSIFQDLQSNEKIAIGHEQDGLYLLN--------- 501
FK NLISV+ + + +V + N + QD+ S I +G + DGLY L+
Sbjct: 411 EFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLSMHFVNQQLQ 470
Query: 502 -KKSFDIVSSKCMTTCTE-------------NSRKIQNFKLWHSRLGHVSNQRLRYAGVL 547
SF + +K + S +I LWH RLGH+SNQRL L
Sbjct: 471 LHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSNQRLSTMSRL 530
Query: 548 DHDELCD--IVCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSITGAKFMVT 605
+ D C IC ++ ++PFP + + + FQL+H D+WGP + + G K+ +T
Sbjct: 531 YPSIIVDNKAACDICHFARHKKLPFPHSSSHANSKFQLLHFDIWGPLAINYVHGHKYFLT 590
Query: 606 IVEDKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQ 665
IV+D +R+ W+ ++ +K +V + +++ LIE QF + + +RTDNG+EFL D +
Sbjct: 591 IVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEFL---LHDFYA 647
Query: 666 SKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLLAATHVINRIP 725
SKGI+HQRS + TPQQNG VERKH+ +L I RA ++Q P +FWS L A +INR+P
Sbjct: 648 SKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRVP 707
Query: 726 TVVLDWKSPYEELNGKPPDISYFRTIGCLCLATNTNPYK 764
T+VL +SPY+ L PD++ F+ GCLC A++ ++
Sbjct: 708 TLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHR 746
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/763 (32%), Positives = 404/763 (52%), Gaps = 64/763 (8%)
Query: 27 HP--GLNLVSVP--LNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRT 82
HP G N V+V L G NY +W+RS+ AL KNK FI+G P + W R
Sbjct: 22 HPSEGPNSVTVTPLLTGPNYLAWNRSMKRALGTKNKFVFIDGSVPIPPMDDLNRTAWERC 81
Query: 83 DSMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNY 142
+++++SW++NS+S IA+ ++ A ++W EL +R+ + + + I++ QG+
Sbjct: 82 NNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSINNLKQGDK 141
Query: 143 SITVYFTKLKQKWDELASLKKFPVCSCG------AAKFFMDFENDSRLMQFLMGLNDSYD 196
S+ YFT +K W+EL S + P+C+C + + DF + +++QFL GLNDS+
Sbjct: 142 SVLDYFTSIKSLWEELNSHRPMPMCTCPYPCRCESMRAARDFRMEDQVIQFLTGLNDSFS 201
Query: 197 HVRNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGNSGYKKRNFKD 256
V+ Q+LL+DPLPSINK YSMV++ E+ + ++ S+E S+IL+ N D
Sbjct: 202 VVKTQVLLIDPLPSINKVYSMVIQ-EESNIIPPTSLASNEDSSILV----------NASD 250
Query: 257 SKNNYKRRESTG-----KENQFCDNCRTKGHTRETCFKIVGYPYWYYELKQKKGQSQAHI 311
++ + R +S+G +++C CR HT E C+ +P + H
Sbjct: 251 ARKPFLRGKSSGTSQSKNNSRYCTFCRRNNHTVEYCYLKHDFPNANKPTASSNAVTSEHA 310
Query: 312 VDNAGETPFDVQNENSKGPTAEWSENLTKIIQQE--VMKAMKGKQMMTVTDENVYVNNCS 369
VD+ + + + G T E +L ++QQ V A T + ++
Sbjct: 311 VDSHTSS-EGTSSSSQTGLTQEQYVHLVSLLQQSSLVPSATPPNPASTNHVATSFPSSID 369
Query: 370 FTGTASNKVFKGTDDKNIGEWIIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLV 429
FT + N +F + W+ID+G +H+ ++ F + +++ KP V LP+G+ +V
Sbjct: 370 FT-SGINTIFSCSLHVPSDHWLIDSGANEHICSSLHLFHSYYRI-KPICVNLPNGSSVIV 427
Query: 430 HYIGTIKLNDRIILTNVLYIPSFKCNLISVTSLTKTNKIAVKSLPNCSIFQDLQSNEKIA 489
Y GT+ + +T+VLY PSFK LISV+ + ++ V L N + QD+++ + I
Sbjct: 428 QYAGTVVFSPHFHITHVLYSPSFKVYLISVSKICQSLPYHVHFLLNTYVIQDVKTQKMIG 487
Query: 490 IGHEQDGLYLLNKKSFDIVSSKCMTTCTENSRKIQNF--------------KLWHSRLGH 535
+G+ DGLY L+ + + +++ + K+ +WH RLGH
Sbjct: 488 LGNLCDGLYRLHPFAPASPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAIWHFRLGH 547
Query: 536 VSNQRLRYAGVLDHDELCDIVCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQ 595
+SNQRL + + SI +K + + F+L+H D+WGP V
Sbjct: 548 LSNQRLSM--------MHSLYSSITIDNKAYSI--------ASSKFELLHFDIWGPLSVT 591
Query: 596 SITGAKFMVTIVEDKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEF 655
S+ G K+ +TIV+D SR+ WV ++ K +V + + +++ LI T + + + +R+DNG EF
Sbjct: 592 SVHGHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSDNGPEF 651
Query: 656 LNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLL 715
L + + SKGI+HQ+S + TPQQNG VERKH+ +L +ARA +FQ P FWS ++
Sbjct: 652 L---IPEFYASKGIIHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLPNFFWSYAVI 708
Query: 716 AATHVINRIPTVVLDWKSPYEELNGKPPDISYFRTIGCLCLAT 758
A +IN++PT + KSPY+ L PDI+ F+ GCLC A+
Sbjct: 709 HAVFLINKVPTPLFKQKSPYQLLYDSLPDINSFKVFGCLCFAS 751
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/751 (31%), Positives = 398/751 (52%), Gaps = 53/751 (7%)
Query: 25 SDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDS 84
S+ P L+S PL+G+NY +WSRS+ A AKNKL FI+G E P+ + W R +
Sbjct: 18 SEGPNSVLISPPLDGSNYLAWSRSMIRAFGAKNKLKFIDGSMEIPDEDDLNRNAWERCNH 77
Query: 85 MVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYSI 144
+V SW++NS+S IA+ ++ +A + W +L +R+ ++ + + +I++ QG S+
Sbjct: 78 LVQSWIINSVSPQIAQTLVFHENAIDAWSDLKERFSKADIIRIASLRSKINNMKQGFKSV 137
Query: 145 TVYFTKLKQKWDELASLKKFPVCS------CGAAKFFMDFENDSRLMQFLMGLNDSYDHV 198
YFT++K W+EL S + P C+ C A + + + +++QFL GLND ++ V
Sbjct: 138 LEYFTEMKTLWEELNSHRPMPHCTCPHPCRCAAMREARCYRLEDQVIQFLTGLNDQFNVV 197
Query: 199 RNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGNSGYKKRNFKDSK 258
+ Q+L++DPLPSINK YS+V+ Q E N+ ++ SS + + + K +
Sbjct: 198 KTQVLMLDPLPSINKVYSLVV----QEESNNLSLTSSINEPFSVVNATNSRKPQ------ 247
Query: 259 NNYKRRESTG-KENQFCDNCRTKGHTRETCFKIVGYPYWYYELKQKKGQSQAHIVDNAGE 317
R S+G + + C C HT E C++ G+P + + S V+
Sbjct: 248 -GRGRGYSSGFRPPRQCTFCGKTNHTVEYCYQKHGHPNFPEQHSSVNASSSNDEVE-VQP 305
Query: 318 TPFDVQNENSKGPTAEWSENLTKIIQQEVMKAMKGKQMMTVTDENVYVNNC-SFTGTASN 376
+ + S + E + L ++QQ + + + +++ ++ T + +
Sbjct: 306 GSCNTSSSTSSNISQEKYDQLLSLLQQVNLLPAASTPSSSASANHIHTSSVPDSTQSGIS 365
Query: 377 KVFKGTDDKNIGEWIIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIK 436
+F + + W +D+G +H+ N +F + HK+ P+ V LP+G+ LV Y GTI+
Sbjct: 366 SIFSCSINSKSDVWFLDSGANEHIVNNTHWFTSFHKI-NPRPVNLPNGSSVLVEYAGTIR 424
Query: 437 LNDRIILTNVLYIPSFKCNLISVTSLTKT-NKIAVKSLPNCSIFQDLQSNEKIAIGHEQD 495
+ L NVLY PSF NLIS+ + + N A+ C + QDL S + I +G EQ
Sbjct: 425 FTPQFYLENVLYSPSFTLNLISIFKVCSSLNCYAIFHNKQC-LLQDLHSQKMIGLG-EQF 482
Query: 496 GLYLLNKKSFDIVSSKCMTTCTENSRKIQNFKLWHSRLGHVSNQRLRYAGVLDHDELCDI 555
G+Y S+ LWH RLGHVS +RL + L D+
Sbjct: 483 GVYY----SYS--------------------ALWHFRLGHVSPKRLIHMSQLYPTLTVDV 518
Query: 556 --VCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSITGAKFMVTIVEDKSRY 613
C IC +KQ ++PF +++ + F+L+H D+WGP + SI ++ +TI++D SRY
Sbjct: 519 HATCDICHFAKQKKLPFSNSISVASIKFELLHFDIWGPLSITSIHNHRYFLTILDDYSRY 578
Query: 614 TWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQR 673
W+ ++ +K +V + +++ LI+TQ+ + + VR+DNG EFL + SKGI+H R
Sbjct: 579 VWIVLLKSKSEVSQHVKNFINLIQTQYNITPKTVRSDNGPEFL---LHSFYASKGIVHHR 635
Query: 674 SSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLLAATHVINRIPTVVLDWKS 733
S + TPQQNG VERKH+ +L + RA ++Q P ++WS LL AT +INR+ + L KS
Sbjct: 636 SCVETPQQNGRVERKHQHILNVGRALLYQSKLPVSYWSYALLHATFIINRVTSPTLHNKS 695
Query: 734 PYEELNGKPPDISYFRTIGCLCLATNTNPYK 764
PY+ L+ P F+ G LC +T + ++
Sbjct: 696 PYQLLHDTIPAEHIFKVFGSLCYSTTLHSHR 726
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/754 (30%), Positives = 381/754 (50%), Gaps = 67/754 (8%)
Query: 25 SDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDS 84
S+ P LV+ L+G NY +WSRS+ A KNKL F++G E P+ + W R +
Sbjct: 18 SEGPNSVLVTPLLDGTNYLAWSRSMIRAFVVKNKLKFVDGYMEIPDEDDLNRSAWERCNH 77
Query: 85 MVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYSI 144
++ SW++NS+S IA+ ++ +A + W +L +R+ ++ + + +I++ QG+ S+
Sbjct: 78 LIQSWIINSVSPPIAQTLVFHENAVDGWSDLKERFSKADKIRIASLRSKINNMKQGSKSV 137
Query: 145 TVYFTKLKQKWDELASLKKFPVCS------CGAAKFFMDFENDSRLMQFLMGLNDSYDHV 198
YFT++K W+EL S + P C+ C A + + + ++MQFL+GLND ++ V
Sbjct: 138 LEYFTEMKTLWEELNSHRPMPHCTCPHPCRCAAMRETRQYRIEDQVMQFLIGLNDQFNVV 197
Query: 199 RNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGNSGYKKRN-FKDS 257
+ QIL++DP+PSIN+ Y +V+ Q E N+ ++ SS + + K + +
Sbjct: 198 KTQILMLDPIPSINRVYYLVV----QEESNNLSLASSITEPFSVVNAADSRKPQGRGRGY 253
Query: 258 KNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYPYWYYELKQKKGQSQAHIVDNAGE 317
N YK C C HT + C++ G+P + KQ + + D+
Sbjct: 254 SNGYKPPRQ-------CTFCGKSNHTVDYCYQKHGHPNF---PKQNSSVNASSSNDDVEA 303
Query: 318 TP-FDVQNENSKGPTAEWSENLTKIIQQEVMKAMKGKQMMTVTDENVYVNNCSFTG---- 372
P + +S + E + ++QQ + + + T +V+ ++ S +
Sbjct: 304 QPGSCSASPSSSSISQEQYDQFLSLLQQVNLLPVASTPTSSATANHVHTSSTSDSAFPIQ 363
Query: 373 TASNKVFKGTDDKNIGEWIIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYI 432
+ + +F + W +D+G +H+ + +F + HK+ PK V LP+G LV Y
Sbjct: 364 SGISSIFSCSISSKSDVWFLDSGANEHIVSSTHWFTSFHKI-NPKPVNLPNGTSVLVEYA 422
Query: 433 GTIKLNDRIILTNVLYIPSFKCNLISVTSLTKTNKIAVKSLPNCSIFQDLQSNEKIAIGH 492
GTI + +VLY PSF NLIS+ + + QDL S + I +G
Sbjct: 423 GTIHFTPHFYIEDVLYSPSFTLNLISIFKVCSSLHCYASFHDKKCFLQDLHSQKMIGLGE 482
Query: 493 EQDGLYLLNKKSFDIVSSKCMTTCTENSRKIQNFKLWHSRLGHVSNQRLRYAGVLDHDEL 552
+ GL LGHVSN+RL + L
Sbjct: 483 QVRGL-----------------------------------LGHVSNKRLNHMSHLYPTLT 507
Query: 553 CD--IVCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSITGAKFMVTIVEDK 610
D C IC +KQ ++ FPT+V+ + F+L+H D+WGP V SI ++ +TI++D
Sbjct: 508 VDNHATCDICQFAKQKKLSFPTSVSVASSKFELLHFDIWGPLAVTSIHNHRYFLTILDDY 567
Query: 611 SRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIM 670
S + W+ ++ +K++V + +++ LI TQ+ + + VR+DNG EFL + SKGI+
Sbjct: 568 SIFFWIVLLKSKYEVSQHVKNFINLIHTQYHITPKVVRSDNGPEFL---LNSFYASKGIV 624
Query: 671 HQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLLAATHVINRIPTVVLD 730
H +S + TPQQNG VERKH+ +L + RA +FQ P ++WS LL A +INR+ + L
Sbjct: 625 HHKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPSSYWSYALLHAIFIINRVTSPTLH 684
Query: 731 WKSPYEELNGKPPDISYFRTIGCLCLATNTNPYK 764
KSPY+ L+G PD+ F+ G LC +T ++
Sbjct: 685 NKSPYQLLHGTIPDVQTFKVFGSLCYSTTLQSHR 718
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 243/759 (32%), Positives = 377/759 (49%), Gaps = 107/759 (14%)
Query: 25 SDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDS 84
SD P ++ L+ +NYHSW+RS+ AL AKNK DF++G P P ++ W R +
Sbjct: 35 SDGPSSVAITPVLSHSNYHSWARSMRRALGAKNKFDFVDGSIPVPTDFDPNFKAWNRCNM 94
Query: 85 MVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYSI 144
+V SW++NS+ IA++ ++
Sbjct: 95 LVHSWIMNSVEDSIAQSIVF---------------------------------------- 114
Query: 145 TVYFTKLKQKWDELASLKKFPVCSCG----AAKFFMDFEND---SRLMQFLMGLNDSYDH 197
LK D A L PVC+C M+ ++ +R ++FL GLNDS+D
Sbjct: 115 ------LKNAIDLEAYLPT-PVCACPHRCMCITGVMNAKHQHEITRSIRFLTGLNDSFDL 167
Query: 198 VRNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGNSGYKKRNFKDS 257
VR+QILLM+PLP+INK +SMV++ E+Q ++ ++ +S+ ++ + G S + R +S
Sbjct: 168 VRSQILLMNPLPTINKIFSMVMQHERQFKI---SIPVDDSTILVNSAGKSQGRGRGNGNS 224
Query: 258 KNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYPYWYYELKQKKGQSQAHIVDNAGE 317
+N KR C C GHT + C++ + + +D++
Sbjct: 225 NSNGKRS---------CSFCGRDGHTIDICYR----------------KHEREDLDDSKS 259
Query: 318 TPFDVQNENSKGPTAEWSENLTKIIQQEVMKAMKGKQMMTVTDENVYVNNCSFTGTASNK 377
+ E S G T E E L ++Q + + K + S+T S+
Sbjct: 260 CKGNSNTEPSFGITKEQYEQLVTLLQSQQASSSKVNLSHVTNHVTSGITRISYTMNHSS- 318
Query: 378 VFKGTDDKNIGEWIIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIKL 437
G WI+D+G +DH+ +I FD+ + P +KLP+G + + + GT+
Sbjct: 319 ---------FGTWIVDSGASDHICSSIKNFDSYAPII-PVHIKLPNGNMAIAKFSGTVTF 368
Query: 438 NDRIILTNVLYIPSFKCNLISVTSLTKTNKIAVKSLPNCSIFQDLQSNEKIAIGHEQDGL 497
+ +I NVLY+ FK NL+SV L N V + QD + + +G +GL
Sbjct: 369 SPGLIARNVLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELIEGL 428
Query: 498 YLLNKKS-----FDIVSSKCMTTCTENSRKIQNFKLWHSRLGHVSNQRL----RYAGVLD 548
Y LN S F+ + + ++ + LWH RLGH+SN RL ++ +
Sbjct: 429 YFLNLGSQVFSQFNHQPVIASSQASSSTTFLPQEALWHFRLGHLSNDRLLRMQQHFPCIK 488
Query: 549 HDELCDIVCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSITGAKFMVTIVE 608
D + VC IC S+ ++PF ++ K+ ++LIH D+WGP SI G K+ +T ++
Sbjct: 489 VDS--NSVCDICHYSRHKKLPFKLSMNKASHCYELIHFDIWGPISTHSIHGHKYFITALD 546
Query: 609 DKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKG 668
D SR+TW+ + TK +V + +++ IE QF KV+ VRTDNG EFL D + SKG
Sbjct: 547 DYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL---MPDFYSSKG 603
Query: 669 IMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLLAATHVINRIPTVV 728
I HQ S + TPQQNG VERKH+ +L +ARA +FQ PK FWS +L A ++INRIPT +
Sbjct: 604 IEHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKVFWSYSVLHAIYIINRIPTPL 663
Query: 729 LDWKSPYEELNGKPPDISYFRTIGCLCLATNTNPYKQNF 767
L KSPY G PD++ F+ GCL A+ + ++ F
Sbjct: 664 LQNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKF 702
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/714 (31%), Positives = 374/714 (52%), Gaps = 76/714 (10%)
Query: 55 AKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKELWDE 114
AKNKL FING P+++ + W R + +V SWL+NS+S IA+ ++ ++A ++W++
Sbjct: 31 AKNKLSFINGTLPVPDTDDLNHNAWERCNHLVHSWLINSVSDSIAQTIVFHDNAFDVWED 90
Query: 115 LFQRYGDSNGPLLYQITREISSFSQGNYSITVYFTKLKQKWDELASLKKFP------VCS 168
L +R+ + + ++ +++ QG S+ YFT++K W+EL S + P C
Sbjct: 91 LKERFSKVDRIRIARLRSSLNTLRQGAKSVLDYFTEMKALWEELHSHRPLPNCHCPFQCK 150
Query: 169 CGAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMN 228
C A + + +++QFL GLN+ + V+ Q+LLMDPLP++NK +S+V+ Q+E N
Sbjct: 151 CDAVTVPKSYRVEDQIIQFLTGLNEQFSVVKTQVLLMDPLPTLNKVFSLVI----QKESN 206
Query: 229 HFTVESSESSAILLAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHTRETCF 288
+ +V + ++ +S + + K+ + + + K + C C HT + C+
Sbjct: 207 NASVPA------MVNLEDSSVSINAYDERKSQGRGKGAYNKPTRHCTFCNKTNHTVDFCY 260
Query: 289 KIVGYPYWYYELKQKKGQSQAHIVDNAGETPFDVQNENS--KGPTAEWSENLTKIIQQEV 346
+ G+P K SQA NA + + +S G + + E L ++QQ
Sbjct: 261 QKHGFP------NANKPNSQA----NASSSDVAEVDGSSGVSGLSQDKMEQLVALLQQAN 310
Query: 347 MKAMKGKQMMTVTDENVY--VNNCSFTGTASNKVFKGTDDKNIGE------WIIDTGCTD 398
+ +VT+ V++C T ++ G + W++D+G +
Sbjct: 311 LIPSSSASSGSVTNHIAAPQVSSCYTTSSSLTPTSAGIINSTTCSSLSNSYWLVDSGANE 370
Query: 399 HMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIKLNDRIILTNVLYIPSFKCNLIS 458
H+ +++ F + H ++ P V LPDG+I V + G I + + LTNVLY SF+ NL+S
Sbjct: 371 HICRDLNLFTSYHAIS-PSIVTLPDGSIVTVTHAGYINFSPQFYLTNVLYSSSFRLNLMS 429
Query: 459 VTSLTKTNKIAVKSLPNCSIFQDLQSNEKIAIGHEQDGLYLLNKKSFDIVSSKCMTTCTE 518
V + ++ + LPN I QD S + I + ++QDGLY
Sbjct: 430 VHKVCESLSCTFQFLPNQCIIQDSTSLKMIGLANQQDGLY-------------------- 469
Query: 519 NSRKIQNFKLWHSRLGHVSNQRLRYAGVLDHDELCD---IVCSICPISKQSRVPFPTNVT 575
+LGH+S+QR+ L + + D VC IC +KQ +PF + +
Sbjct: 470 -------------KLGHLSHQRMNMMSSLYSNIVSDNKNSVCDICHFAKQKHLPFSISTS 516
Query: 576 KSEKLFQLIHIDLWGPYGVQSITGAKFMVTIVEDKSRYTWVYMINTKHQVCSVLSHYLQL 635
+ F+L+H+D+WGP + SI G K+ +TIV+D SR+ W+ + TK V + ++++
Sbjct: 517 HATSNFELLHLDIWGPLSISSIHGHKYFLTIVDDHSRFLWIISLKTKSGVSHHVKSFIKM 576
Query: 636 IETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQI 695
++TQF V + +R+DNG EFL ++S GI+HQ+S + TPQQNG VERKH +L +
Sbjct: 577 VQTQFHVTPKCIRSDNGPEFL---ILSFYESLGILHQKSCVETPQQNGRVERKHHHILNV 633
Query: 696 ARAFMFQGHFPKNFWSECLLAATHVINRIPTVVLDWKSPYEELNGKPPDISYFR 749
RA ++Q P ++WS LL A +INR PT +L+ +SPY L+ K PDI F+
Sbjct: 634 GRALLYQSKLPASYWSYALLHAVFLINRKPTPLLEGQSPYYALHHKFPDIDTFK 687
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/770 (30%), Positives = 391/770 (50%), Gaps = 87/770 (11%)
Query: 10 RSEAELTNDPLNLTNSDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKP 69
R++ P + S+ P +VS L+G+NY +W+RS+ +L KNKL FING E+P
Sbjct: 4 RNQGPDQESPFYVHPSEGPSSLIVSPKLDGSNYLAWNRSMKRSLGTKNKLGFINGSIEQP 63
Query: 70 NSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQ 129
+ + W R + +V SW++NS+S IA+ ++ ++A E+W +L +R+ ++ +
Sbjct: 64 DLDDLNRSAWERCNFLVQSWIINSVSDSIAQTVVFYDTAYEVWQDLHERFSKADRIRIAN 123
Query: 130 ITREISSFSQGNYSITVYFTKLKQKWDELASLKKFP------VCSCGAAKFFMDFENDSR 183
+ I++ QG S+ YFT+LK W+EL+S + P C C A + + + +
Sbjct: 124 LRSSINNLKQGAKSVLEYFTELKSLWEELSSHRPIPSCVCVHACRCDATRVAKIYRTEDQ 183
Query: 184 LMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLA 243
+MQFL GLND++ V+ Q+LL++PLP +NK YS+V++ E + ++ +S+ S I L
Sbjct: 184 IMQFLTGLNDNFGVVKTQVLLLNPLPPLNKVYSLVVQEESNNSLP-ISISASDDSNIQL- 241
Query: 244 QGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYPYWYYELKQK 303
K S+ K ++ K N++C C HT + C+++ G+P + +Q
Sbjct: 242 ------NASEVKKSQGRGKGFVNSQKPNRYCTFCHKTNHTVDFCYQLHGHPS--FPKQQS 293
Query: 304 KGQSQAHIVDNAG--ETPFDVQNENSKGPTAEWSENLTKIIQQEVMKAMKGKQMMTVTDE 361
K + I D G + + + E L ++QQ + +
Sbjct: 294 KVTASHEIPDENGALDHGLGGSTGSGTSLSPEQYTQLVSLLQQASLISS----SSPPPTS 349
Query: 362 NVYVNNCSFTGTASNKVFKGTDD-KNIGE----WIIDTGCTDHMTYNISFFDTLHKLAKP 416
N N+ T SN + D + I W++D+G +H+ N+SFF +LH++ KP
Sbjct: 350 NATTNHVQTTPFVSNNISASPHDTEGISSKPYYWLLDSGANEHICSNLSFFTSLHRI-KP 408
Query: 417 KSVKLPDGAIKLVHYIGTIKLNDRIILTNVLYIPSFKCNLISVTSLTKTNKIAVKSLPNC 476
V LP+ +VH+ G + + LTN
Sbjct: 409 VRVNLPNKTSIIVHFAGNVVFTPQFYLTN------------------------------- 437
Query: 477 SIFQDLQSNEKIAIGHEQDGLYLLNKKSFDIVSSKCM-----------TTCTENSRKIQN 525
D S + I + + GLY S D S+ M +C N+ I
Sbjct: 438 ----DQTSLKMIGLAKQVAGLYRYTPPS-DFSSTSLMHSPNKSCNFSSISCNSNN-CIPV 491
Query: 526 FKLWHSRLGHVSNQRL-----RYAGVLDHDELCDIVCSICPISKQSRVPFPTNVTKSEKL 580
LWH RLGH+SNQR+ Y ++ ++ VC IC SKQ +PF ++++ +
Sbjct: 492 AALWHFRLGHLSNQRMIKMSHLYPSIVHNNR---DVCDICHFSKQKHLPFSSSLSHASTN 548
Query: 581 FQLIHIDLWGPYGVQSITGAKFMVTIVEDKSRYTWVYMINTKHQVCSVLSHYLQLIETQF 640
F+L+H D+WGP + S+ G ++ +TI++D SR+ W+ ++ +K +V + +++ +I TQF
Sbjct: 549 FELLHFDIWGPISISSVHGHRYFLTILDDHSRFLWIILLKSKSEVSLHVKNFILMIRTQF 608
Query: 641 GVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAFM 700
V + VR+DNG EFL D + S GI+HQ+S + TPQQNG VERKH+ +L + RA +
Sbjct: 609 HVTPKYVRSDNGPEFL---LNDFYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGRALL 665
Query: 701 FQGHFPKNFWSECLLAATHVINRIPTVVLDWKSPYEELNGKPPDISYFRT 750
+Q P +FWS +L A +INR+PT VL +SPY L K PDI F++
Sbjct: 666 YQSKLPPSFWSYAILHAVFLINRVPTHVLHNQSPYHVLFHKLPDIQLFKS 715
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 1229 NLKLKPDECDLLKDPEQYRSLVGRLLYFNLTRPDVTYSVQQLSQFM 1274
+LKL D +D YR L+GRLLY N TRPD+TY QQLSQF+
Sbjct: 1137 SLKLHKDGALPYEDIPSYRRLIGRLLYLNTTRPDITYITQQLSQFL 1182
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 358 bits (919), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 234/760 (30%), Positives = 370/760 (48%), Gaps = 75/760 (9%)
Query: 25 SDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDS 84
S+ P ++ L G+NY +WSR++ +L KNKL FING P+ + W R +
Sbjct: 19 SESPNSLSITPKLTGSNYIAWSRTVERSLGTKNKLGFINGSIPMPDEDDLNRAAWERCNH 78
Query: 85 MVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYSI 144
+V SWL+NS+S IA ++ ++A E+W +L +R+ + + + I++ QG ++
Sbjct: 79 LVQSWLINSVSDSIAPTVVFCDTALEVWLDLKERFSKIDRIRIANLRSSINNLKQGAKTV 138
Query: 145 TVYFTKLKQKWDELASLKKFP------VCSCGAAKFFMDFENDSRLMQFLMGLNDSYDHV 198
YFT++K W+EL+S + P C C A++ N+ ++MQFL LND + V
Sbjct: 139 LDYFTEMKSLWEELSSHRPIPNCVCVHQCRCLASRIAKTHRNEDQIMQFLTSLNDQFSVV 198
Query: 199 RNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGNSGYKKRNFKDSK 258
R Q+LL+DPLPS+NK YS+V+ Q E NH ++ S + Q N+ +R F+
Sbjct: 199 RTQVLLLDPLPSLNKVYSLVV----QEESNHASLPSLSVADDTSIQINATDTRR-FQRRG 253
Query: 259 NNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYPYWYYELKQKKGQSQAHIVDNAGET 318
+Y S K + C C HT + C+ G+P + SQ +
Sbjct: 254 KSY----SQPKPTRLCTFCNRTNHTVDFCYLKHGFPNVNKTQPRVNVASQEDSDAGNSSS 309
Query: 319 PFDVQNENSKGPTAEWSENLTKIIQQEVMKAMKGKQMMTVTDENVYVNNCSFTGTASNKV 378
++ + + L ++QQ + T ++ S + +AS
Sbjct: 310 GSSTSANSNISFSQDQLTQLVSMLQQANLVVPASSTPQTTSNHIAASPLISSSISASESS 369
Query: 379 ------FKGTDDKNIGEWIIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYI 432
F + W+ID+G +H+ +I+FF + +++ KP +V LP+G I LVHY
Sbjct: 370 AGIPVSFPSSSTNKPPFWLIDSGANEHICCDITFFSSFYRI-KPVNVSLPNGTIVLVHYA 428
Query: 433 GTIKLNDRIILTNVLYIPSFKCNLISVTSLTKTNKIAVK-SLPNCSIFQDLQSNEKIAIG 491
GT+ N + L +VLY P+F NLISV L ++ SL C + QD QS + I +
Sbjct: 429 GTVSFNSKFYLNHVLYSPNFLLNLISVAKLCESLTCFFHFSLDKC-LIQDQQSLKMIGLA 487
Query: 492 HEQDGLYLL-------NKKSFDIVSSKCMTTCTENSRKIQNF----KLWHSRLGHVSNQR 540
+ DGLY N + F + C + KI F LWH RLGH+S QR
Sbjct: 488 KQMDGLYKFYPSSSSCNLELFSSPTKYCNVVLPSSCNKIPTFVPSDTLWHFRLGHLSKQR 547
Query: 541 LRYAGVLDHDELCD--IVCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSIT 598
L+ +L D +C +C +K +PF +N
Sbjct: 548 LQTLSLLYPSIKIDNKAICDLCHFAKHKHLPFTSN------------------------- 582
Query: 599 GAKFMVTIVEDKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNT 658
D SR+ W+ ++ TK +V + + +++ +I+ F + +RTDNG EF+
Sbjct: 583 ----------DHSRFLWIILLKTKAEVSTHVKNFITMIKNHFHTTPKFIRTDNGPEFM-- 630
Query: 659 QCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLLAAT 718
L+ S GI+HQ+S + TPQQNG VERKH+ +L + RA ++Q P +W + A
Sbjct: 631 -LSTLYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPAYWCYAIQHAV 689
Query: 719 HVINRIPTVVLDWKSPYEELNGKPPDISYFRTIGCLCLAT 758
+INR+PT L+ +SPY L+ K PD S F+ GCLC A+
Sbjct: 690 FLINRVPTPTLNNQSPYFVLHHKLPDSSLFKVFGCLCYAS 729
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 266 bits (679), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 200/714 (28%), Positives = 331/714 (46%), Gaps = 115/714 (16%)
Query: 55 AKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKELWDE 114
AKNKL F++G P + W R +S++ SW+LNS+
Sbjct: 30 AKNKLSFVDGSILIPPLDDLNRSVWERCNSLIHSWILNSLQ------------------- 70
Query: 115 LFQRYGDSNGPLLYQITREISSFSQGNYSITVYFTKLKQKWDELASLKKFPVCSCG---- 170
+R+ + + + I++ QG + YFT+LK W+EL S P+C+C
Sbjct: 71 --ERFSKVDRVRISSLCTTINNLKQGTKFVLEYFTELKSLWEELNSHCPMPMCTCPHPCR 128
Query: 171 --AAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMN 228
+ + +F + +++QFL GLND++ V+ Q+++ + SINK YS+V++ E +
Sbjct: 129 CESMRSARNFRLEDQIIQFLTGLNDNFGVVKTQVVIQE---SINKIYSLVIQEESNNSV- 184
Query: 229 HFTVESS-ESSAILLAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHTRETC 287
T SS E S IL+ N+ ++ F K N +++C C HT E C
Sbjct: 185 -VTASSSIEDSNILV---NASDARKPFGRGKLN-SGSHPPKNNSKYCSFCHKTNHTLEFC 239
Query: 288 FKIVGYPYWYYELKQKKGQSQAHIVDNAGETPFDVQNENSK-GPTAEWSENLTKIIQQEV 346
++ G+P KG + V++ G + S+ G T E +L ++QQ
Sbjct: 240 YQKHGFP------NANKGSGSTNAVNSEGVPESQGSSAISQIGLTQEQYVHLVSLLQQSS 293
Query: 347 MKAMKGKQMMTVTDENVYVNNCSFTGTASNKVFKGTDDKNIGEWIIDTGCTDHMTYNISF 406
+ + +T + N ++ S+ G N +F W+ID+G +H+ ++S
Sbjct: 294 L--IIPAPPITSANTNHIISEPSYAGI--NTIFPCCLHVKSNYWLIDSGANEHICSSLSL 349
Query: 407 FDTLHKLAKPKSVKLPDGAIKLVHYIGTIKLNDRIILTNVLYIPSFKCNLISVTSLTKTN 466
+ + + KP V LP+G LVHY GT+ + +TN +I + L +
Sbjct: 350 LHSFY-IIKPLHVTLPNGTSVLVHYAGTVSFSPHFHITN---------KMIGLGDL--CD 397
Query: 467 KIAVKSLPNCSIFQDLQSNEKIAIGHEQDGLYLLNKKSFDIVSSKCMTTCTENSRKIQNF 526
+ +P S F N + NK S++ C + N+ I +
Sbjct: 398 GLCRLRIPASSNFSHCFVNN-----------FQCNKVSYE----SCNSVSCNNNVHIPST 442
Query: 527 KLWHSRLGHVSNQRLRYAGVLDHDELCD--IVCSICPISKQSRVPFPTNVTKSEKLFQLI 584
LWH RLGH+SNQRL L D D +C IC +KQ ++P+ ++ + + F+L+
Sbjct: 443 ALWHFRLGHLSNQRLSQMHHLYPDIHVDNKFICDICHFAKQRKLPYNSSTSIASSNFELL 502
Query: 585 HIDLWGPYGVQSITGAKFMVTIVEDKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKV 644
++D+WGP SI G ++ +TIV+D SR+ W + K +V S + H++ LI+ + V
Sbjct: 503 YLDIWGPLAKVSIHGQRYFLTIVDDHSRFLWTILFKNKSEVPSHIQHFIYLIQNKHKVTP 562
Query: 645 QKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGH 704
+ +R+DNG FL + + S+GI+HQRS + TPQ N
Sbjct: 563 KIIRSDNGHVFLLSA---FYASQGIIHQRSCVETPQHN---------------------- 597
Query: 705 FPKNFWSECLLAATHVINRIPTVVLDWKSPYEELNGKPPDISYFRTIGCLCLAT 758
+INR+PT+VL+ KSPY+ L PDI+ F+ GCLC A+
Sbjct: 598 -------------VFLINRVPTLVLENKSPYQVLYKTLPDINSFKVFGCLCYAS 638
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 161/508 (31%), Positives = 252/508 (49%), Gaps = 47/508 (9%)
Query: 19 PLNLTNSD-------HP--GLNLVSVP--LNGNNYHSWSRSITIALRAKNKLDFINGRYE 67
P N+ SD HP G N +S+ NG+NY +WSR++ +L KNKL FING
Sbjct: 3 PRNVVQSDTESVFFVHPSEGPNSLSITPKFNGSNYIAWSRTVERSLGTKNKLGFINGSIP 62
Query: 68 KPNSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLL 127
P+ + W R + +V SWL+NS+S+ IA+ ++ +SA E+W +L +R+ + +
Sbjct: 63 MPDEDDLNRTAWERCNHLVQSWLINSVSESIAQTIVFCDSALEVWLDLKERFSKIDRIRI 122
Query: 128 YQITREISSFSQGNYSITVYFTKLKQKWDELASLKKFPVCSC------GAAKFFMDFEND 181
+ I++ QG+ + YFT++K W+EL+S + P CSC A+K N+
Sbjct: 123 ANLRSNINNLKQGSKFVLDYFTEIKSLWEELSSHRPIPNCSCIHPCRCAASKVAKIHRNE 182
Query: 182 SRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAIL 241
++MQFL GLND + VR Q+LL+DPLPS+NK YS+V+ Q E NH ++ S S
Sbjct: 183 DQIMQFLTGLNDQFSVVRTQVLLLDPLPSMNKVYSLVV----QEESNHASITSLSVSTDT 238
Query: 242 LAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYPYWYYELK 301
Q N+ ++ K+ Y + K + C C HT + C+ GYP
Sbjct: 239 SIQINATENRKPQGRGKSFY-----SNKPTRLCTFCNRTNHTVDFCYLKHGYPNVNKPSS 293
Query: 302 QKKGQSQ-----AHIVDNAGETPFDVQNENSKGPTAEWSENLTKIIQQE--VMKAMKGKQ 354
SQ I + TP + S G + E L ++QQ V+ A Q
Sbjct: 294 SVNAASQEDSENGTISSSGLGTP---ASSPSAGFSQEQLAQLVSMLQQSNLVVSAPSPSQ 350
Query: 355 MMTVTDENVYVNNCSFTGTASNKVFKGTDDKNIGE---WIIDTGCTDHMTYNISFFDTLH 411
+ + ++ + S + S+K + + W+ID+G +H+ +I+ F + +
Sbjct: 351 VTSN-----HIASASISTPDSSKGILASVSSLTSKPPFWLIDSGANEHICCDIASFSSFY 405
Query: 412 KLAKPKSVKLPDGAIKLVHYIGTIKLNDRIILTNVLYIPSFKCNLISVTSLTKTNKIAVK 471
++ KP V LP+G L H+ G + N + L++VLY P F NLISV +
Sbjct: 406 RI-KPVYVSLPNGNSVLAHFAGNVFFNSKFHLSHVLYSPHFTLNLISVAKCCDSLTCFFH 464
Query: 472 -SLPNCSIFQDLQSNEKIAIGHEQDGLY 498
SL C + QD QS + I + +QDGLY
Sbjct: 465 FSLEKC-LIQDQQSLKMIGLAKQQDGLY 491
Score = 147 bits (371), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 588 LWGPYGVQSITGAKFMVTIVEDKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKV 647
+WGP V S+ G ++ +TI++D +R+ WV ++ TK +V S + +++ +I+ F + +
Sbjct: 521 IWGPLSVASVHGHRYFLTILDDHTRFLWVILLKTKAEVSSHVKNFITMIQNHFHTTPKFI 580
Query: 648 RTDNGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFPK 707
RTDNG EF+ + S GI+HQ+S + TPQQNG VERKH+ +L + RA ++Q P
Sbjct: 581 RTDNGPEFM---LPSFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPP 637
Query: 708 NFWSECLLAATHVINRIPTVVLDWKSPYEELNGKPPDISYFRT 750
+FWS + A +INR+PT +L +SPY L+ K PDI+ F++
Sbjct: 638 SFWSYAIHHAVFLINRVPTPLLHNQSPYFLLHHKLPDIALFKS 680
>IMGA|Medtr7g045780.1 Retrotransposon gag protein
chr07_pseudomolecule_IMGAG_V3 11034924-11036399 H
EGN_Mt090430 20090702
Length = 491
Score = 209 bits (533), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 246/467 (52%), Gaps = 32/467 (6%)
Query: 52 ALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKEL 111
AL AKNKL FING ++P + W R + ++ SW++NS+S+ IA+ ++ + A ++
Sbjct: 4 ALGAKNKLAFINGIIQQPEALDLNRAAWERCNHLIHSWIINSVSESIAQNIVFHDYALDV 63
Query: 112 WDELFQRYGDSNGPLLYQITREISSFSQGNYSITVYFTKLKQKWDELASLKKFPVCS--- 168
W++L +R+ ++ + + I++ QG +++ YFT+++ W+EL S + P CS
Sbjct: 64 WEDLKERFSKADRIRISTLCSSINNLKQGGKTVSEYFTEMRSLWEELNSHRPLPNCSCIH 123
Query: 169 ---CGAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQR 225
C A+ + + ++MQFL+GLND + V+ QILLMDPLPS+NK YS+V+ Q
Sbjct: 124 RCCCEASTRAHVYRVEDQIMQFLIGLNDQFSIVKTQILLMDPLPSLNKVYSLVI----QE 179
Query: 226 EMNHFTVES--SESSAILLAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHT 283
E NH + S ++ S IL+ +S K+++ K Y ++++ + FC+ RT HT
Sbjct: 180 ESNHAPILSLPADESNILVNVADS---KKSYGRGKGYYSNQKNSSRHCTFCN--RTN-HT 233
Query: 284 RETCFKIVGYPYWYY---ELKQKKGQSQAHIVDNAGETPFDVQNENSK-GPTAEWSENLT 339
+TC+ G+P +G + + V++ + + N +S + + E+L
Sbjct: 234 IDTCYLKHGFPNANIPGNSTASTQGSTNSVTVESGNVSNTEHGNGDSGFSISQDRYEHLV 293
Query: 340 KIIQQ------EVMKAMKGKQMMTVTDENVYVNNCSFTGTASNKVFKGTDDKNIGEWIID 393
++QQ V ++ +T + V S +A + F ++ WIID
Sbjct: 294 NLLQQATLLSSAVSPSVSTSNQLTTSPSMPIVPYQSGIQSAFSCSFH---INSLPIWIID 350
Query: 394 TGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIKLNDRIILTNVLYIPSFK 453
+G DH+ ++ S F +K+ KP V LP+G VHY G + + L NVLY FK
Sbjct: 351 SGANDHVCFSKSHFTAFYKI-KPVLVTLPNGNSIYVHYAGNVYFTPHLYLNNVLYSLEFK 409
Query: 454 CNLISVTSLTKTNKIAVKSLPNCSIFQDLQSNEKIAIGHEQDGLYLL 500
NLISV+ + + + + N + QD+ S++ I +G + +GLY L
Sbjct: 410 VNLISVSKMCDSLSCSGNFVSNKCVIQDVTSHKMIGLGDKSNGLYTL 456
>IMGA|Medtr7g123950.1 Retrotransposon gag protein
chr07_pseudomolecule_IMGAG_V3 29015812-29013196 E
EGN_Mt090430 20090702
Length = 302
Score = 197 bits (500), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 137/210 (65%)
Query: 18 DPLNLTNSDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYE 77
DPL L +SD PG++LV+ PLNG NY WSRS+ ++L AKNKL I+G + P+++ P
Sbjct: 33 DPLLLHHSDTPGISLVNQPLNGGNYGEWSRSMLLSLSAKNKLGLIDGTVKAPSADDPKLP 92
Query: 78 KWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSF 137
W R + +V++W+L+SI DIA + ++S++A +W +L R+ + +YQI +EIS
Sbjct: 93 LWKRCNDLVLTWILHSIEPDIARSVIFSDTAAAVWSDLHDRFSQGDESRIYQIRQEISEC 152
Query: 138 SQGNYSITVYFTKLKQKWDELASLKKFPVCSCGAAKFFMDFENDSRLMQFLMGLNDSYDH 197
QG+ I+ Y+TKLK WDEL S ++ CSC K E ++MQFLMGLN+SY
Sbjct: 153 RQGSLLISDYYTKLKSLWDELGSYQEPITCSCDMLKKVAVREEKEKVMQFLMGLNESYSQ 212
Query: 198 VRNQILLMDPLPSINKAYSMVLRVEKQREM 227
VR IL+M+PLP K + ++L+ E+Q E+
Sbjct: 213 VRGSILMMNPLPDTRKVHGLILQQERQMEV 242
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 130/204 (63%), Gaps = 3/204 (1%)
Query: 556 VCSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSITGAKFMVTIVEDKSRYTW 615
C +C ++ ++PF + + + FQL+H D+WGP + SI G K+ +TIV+D +R+ W
Sbjct: 15 ACDVCHFARHKKLPFSHSSSHASSKFQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLW 74
Query: 616 VYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSS 675
+ ++ TK +V + +++ +IE QF V + +RTDNG+EFL + + SKGI+HQ S
Sbjct: 75 IILLKTKAEVPMHIKNFIVMIENQFHVTPKIIRTDNGSEFL---LHEFYASKGILHQSSC 131
Query: 676 IYTPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLLAATHVINRIPTVVLDWKSPY 735
+ TPQQNG VERKH+ +L I RA ++Q P +FWS L A +INRI T VL SPY
Sbjct: 132 VETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPY 191
Query: 736 EELNGKPPDISYFRTIGCLCLATN 759
L PPDI+ F+ GCLC A++
Sbjct: 192 HLLYDSPPDITTFKVFGCLCYASS 215
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 209/420 (49%), Gaps = 47/420 (11%)
Query: 27 HP--GLN-LVSVP-LNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRT 82
HP GL+ LV P NG NY +WSRS+ AL AK KL FING P+++ W R
Sbjct: 21 HPSEGLHSLVVTPKFNGTNYLAWSRSMQRALGAKCKLGFINGEIPVPDADDLNRTAWERC 80
Query: 83 DSMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNY 142
+ +V SW+LNS+S+ IA+ ++ +SA E+W +L +R+ ++ + + I+ QG
Sbjct: 81 NHLVQSWILNSLSESIAQTVVFCDSASEVWQDLHERFSKTDRIRIATLRSSINILKQGTK 140
Query: 143 SITVYFTKLKQKWDELASLKKFP------VCSCGAAKFFMDFENDSRLMQFLMGLNDSYD 196
S+ YFT+LK W+E +S P C C A + + ++MQFL GLND +
Sbjct: 141 SVLDYFTELKGLWEEFSSHLPIPNCICVHPCRCEATRVAKTHRTEDQIMQFLTGLNDQFS 200
Query: 197 HVRNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVES---SESSAILLAQGNSGYKKRN 253
V+ QILL+DPLPS+NK YSMV+ Q E N+ ++ S S+ S I L ++ RN
Sbjct: 201 VVKTQILLLDPLPSLNKVYSMVI----QEESNNSSIPSVSVSDDSNIQLNASDA----RN 252
Query: 254 FKDSKNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYPYWYYELKQKKGQSQAHIVD 313
F+ + S K +FC C+ HT + C++ GYP +KQ+ S +
Sbjct: 253 FQ-PRGKGPSSGSNNKPTRFCSFCKRTNHTVDFCYQKHGYP---NVIKQQARTS----AN 304
Query: 314 NAGETPFDVQNENSK----------GPTAEWSENLTKIIQQEVMKAMKGKQMM----TVT 359
N + FD + N+ G + E L ++QQ + A T+T
Sbjct: 305 NIAQVDFDAASSNASNLNVSANSNTGLSQEQFTQLVSLLQQSNLVASSSPSPGPSSNTIT 364
Query: 360 DENVYVNNCSFTGTASNKVFKGTDDKNIGEWIIDTGCTDHMTYNISFFDTLHKLAKPKSV 419
+ ++ S T + + + ++ W+ID+G +H+ + F + +K+ KP V
Sbjct: 365 ATPLVSSSISATEISPTGI---SFPSHLTHWLIDSGANEHICCDSRCFSSFYKI-KPMQV 420
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Query: 640 FGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAF 699
F + + +R DNG EF+ +D + S GI+H +S + TPQQNG VERKH+ +L + RA
Sbjct: 454 FQITSKTIRIDNGPEFM---LKDFYASHGIIHHKSCVETPQQNGRVERKHQHILNVVRAL 510
Query: 700 MFQGHFPKNFWSECLLAATHVINRIPTVVLDWKSPYEELNGKPPDISYFRTIGCLCLAT 758
+FQ P FWS +L A +INR+ T +L +SPY L+ K P + F+ GCLC A+
Sbjct: 511 LFQSKLPPTFWSYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYAS 569
>IMGA|Medtr5g086570.1 Ty1/copia-element polyprotein, related
chr05_pseudomolecule_IMGAG_V3 33221869-33220686 H
EGN_Mt090430 20090702
Length = 369
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 17/287 (5%)
Query: 10 RSEAELTNDPLNLTNSDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKP 69
+S A ++ P L +SD+PG LV+ LNG NY +WSRS+ AL+AK KL FI+G KP
Sbjct: 33 KSHAIYSSSPYYLGSSDNPGTPLVAAVLNGENYRTWSRSMKTALQAKLKLGFIDGTITKP 92
Query: 70 NSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQ 129
+ Y W R DSMV +W++N+ + + ++++A+++W +L +R+ +N P ++Q
Sbjct: 93 GMKTTNYVNWERADSMVTAWIINATDPVLHSSISHASTARDIWLDLEERFAQTNTPRIHQ 152
Query: 130 ITREISSFSQGN-YSITVYFTKLKQKWDELASLKKFPVCSCGAAKFFMDFENDSRLMQFL 188
+ R + + + S+T ++T+ K DEL+ L+ P C+CGA+K M E + RL FL
Sbjct: 153 LWRNLCLMQEDDELSVTAFYTQFKSLLDELSELQPLPECTCGASKELMRMEEEQRLHLFL 212
Query: 189 MGL-NDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGNS 247
L N+ Y HV+ IL ++PLPS+ +A++ VLR E HF VE + + + +
Sbjct: 213 GSLDNEKYGHVKTSILNVEPLPSLRRAFNHVLREEA-----HFPVEKEKGNNKM----DP 263
Query: 248 GYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYP 294
G ++ S+N KR K CD+C GH + CF+I+GYP
Sbjct: 264 GTAFHSY--SENKQKRDGPKPK----CDHCGKVGHPKSKCFEIIGYP 304
>IMGA|Medtr5g086720.1 4D11_12, related chr05_pseudomolecule_IMGAG_V3
33350941-33351963 H EGN_Mt090430 20090702
Length = 326
Score = 166 bits (421), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 156/288 (54%), Gaps = 33/288 (11%)
Query: 10 RSEAELTNDPLNLTNSDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKP 69
+S A ++ P L +SD+PG LV+ LNG NY +WSRS+ ALRAK KL FI+G KP
Sbjct: 25 KSHAIDSSSPYYLGSSDNPGTPLVAAVLNGENYRTWSRSMKTALRAKLKLGFIDGTITKP 84
Query: 70 NSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQ 129
+ Y W R DSMV +W++N+ + + ++++ +++W +L +R+ +N P ++Q
Sbjct: 85 GMKTTNYVNWERADSMVTAWIINATDPVLHSSISHASTTRDIWLDLEERFAQTNAPRIHQ 144
Query: 130 ITREISSFSQGNYSITVYFTKLKQKWDE--LASLKKFPVCSCGAAKFFMDFENDSRLMQF 187
+ R + L QK DE L+ L+ P C+CGA+K M E + L F
Sbjct: 145 LWRNLC---------------LMQKDDELSLSELQPLPECTCGASKELMRREEEQCLHLF 189
Query: 188 LMGL-NDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGN 246
L L N+ Y HV+ IL ++PLPS+ +A++ VLR E + FTVE E + G
Sbjct: 190 LGSLDNEKYGHVKTSILNVEPLPSLRRAFNHVLREEAR-----FTVE-KEKGNNKMDPGT 243
Query: 247 SGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYP 294
+ + K +++ K + CD+C GH + CF+I+GYP
Sbjct: 244 AFHSYSGNKQNRDGPKPK---------CDHCGKVGHPKSKCFEIIGYP 282
>IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
36507044-36505941 H EGN_Mt090430 20090702
Length = 367
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 140/244 (57%), Gaps = 14/244 (5%)
Query: 6 SQIARSEAELTNDPLNLTNSDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGR 65
S+ + ++ P L S++PG LVS PL +NYH+WSR++ AL +KNK+ FING
Sbjct: 17 SKTIKDPSQDPRSPFFLHPSENPGAVLVSTPLTDHNYHNWSRAMKRALSSKNKIRFINGT 76
Query: 66 YEKPNSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGP 125
KP+ Y+ W R D+MV+SW+ ++S I ++ + SA ELW +L R+ N
Sbjct: 77 LPKPSYLDSTYDLWDRCDNMVLSWITRTLSPHIFQSTICIESAFELWKDLEDRFSKGNFF 136
Query: 126 LLYQITREISSFSQGNYSITVYFTKLKQKWDELASLKKFPVCS------CGAAKFFMDFE 179
+ + R++ S QG+ S++ YFT +K WDEL L+ P CS C + +++
Sbjct: 137 RVSDLLRDLHSTQQGDRSLSKYFTNMKILWDELEDLRPTPSCSYVNPCTCSLSNSVRNYK 196
Query: 180 NDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMNHF----TVESS 235
N ++ FL GLN Y +VR Q LLMDPLPSI+K YS+V Q++ NH+ TV S
Sbjct: 197 NMEYIICFLKGLNTIYSNVRTQNLLMDPLPSISKVYSLV----SQQDFNHYDDSTTVSKS 252
Query: 236 ESSA 239
S A
Sbjct: 253 SSEA 256
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 101/151 (66%)
Query: 562 ISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSITGAKFMVTIVEDKSRYTWVYMINT 621
+++QSR+PFP + +F+L+H+D+WGPY + K+ +T+V+D S+ TW +++
Sbjct: 1 MARQSRLPFPPKTHTTTGIFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSC 60
Query: 622 KHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQ 681
K VL ++ ++E QF V+ +R+DNG EF + + FQSKGI+HQ+S YTPQQ
Sbjct: 61 KSNAFHVLKAFILMVENQFSTTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQ 120
Query: 682 NGVVERKHRSLLQIARAFMFQGHFPKNFWSE 712
NGVVERKH+ +L+ ARA +FQ P +WSE
Sbjct: 121 NGVVERKHKFILETARALLFQSKLPVKYWSE 151
>IMGA|Medtr3g019580.1 Retrotransposon gag protein
chr03_pseudomolecule_IMGAG_V3 4112343-4111299 H
EGN_Mt090430 20090702
Length = 334
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 142/252 (56%), Gaps = 12/252 (4%)
Query: 52 ALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKEL 111
AL KNK F++G E P+ + W R +++V +W++NSIS IA++ ++ +A ++
Sbjct: 6 ALAMKNKFKFVDGSIEVPDEHDLNRAAWERCNNLVHTWIINSISPSIAQSVVFIENAMDM 65
Query: 112 WDELFQRYGDSNGPLLYQITREISSFSQGNYSITVYFTKLKQKWDELASLKKFP------ 165
W++L R+ + + Q+ +EIS+ QG+ +T YFT+L+ W+EL + P
Sbjct: 66 WNDLKDRFMRGDRIRVAQLQQEISNLKQGSKKVTEYFTELRGLWEELDQYRPMPHCTCPI 125
Query: 166 VCSCGAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQR 225
CSC A + F + R++QFL+GLN+ Y V +Q+LLMDPLP IN+ +SM+++ E++
Sbjct: 126 PCSCLAMRNAKGFRLEDRIIQFLIGLNEEYQSVTSQVLLMDPLPQINRVFSMIMQQERKA 185
Query: 226 EMNHFTVESS---ESSAILLAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGH 282
+ +S ++SA L+ N+ +R F + N + + C+ C H
Sbjct: 186 QYGIIVAPASVVEDTSARLV---NAVDAQRQFGRGRGNAGFQGRGRGNGRVCNFCGRSNH 242
Query: 283 TRETCFKIVGYP 294
T ETC+K G+P
Sbjct: 243 TMETCYKKHGFP 254
>IMGA|Medtr7g126870.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 29583401-29584363 H
EGN_Mt090430 20090702
Length = 302
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 139/246 (56%), Gaps = 31/246 (12%)
Query: 26 DHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDSM 85
++P LV+ L+GNNYHSWSRS+ +ALR+K+KL FING +P + W R SM
Sbjct: 36 ENPDAVLVTPLLSGNNYHSWSRSMQVALRSKHKLHFINGTLPRPCDDDHDSIAWDRCKSM 95
Query: 86 VVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYSIT 145
++SWL N + +I+++ L+ ++A E+W+EL +R F QG SI+
Sbjct: 96 IMSWLSNYVDPEISQSILWMDTALEIWNELKER------------------FYQGESSIS 137
Query: 146 VYFTKLKQKWDELASLKKFP----VCSCGAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQ 201
Y+TK+K+ W EL + + P V C A ++++ ++++FL GLN+ + VR+Q
Sbjct: 138 SYYTKMKKLWQELDNFRPIPTSNCVDDCKAIAKMREYKDSDQVIRFLRGLNEQFLAVRSQ 197
Query: 202 ILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLA----QGNSGYKKRNFKDS 257
I+LMDPLPSI K YS++++ E+Q V ES + ++ GN Y + N S
Sbjct: 198 IMLMDPLPSIGKVYSLLVQQERQ-----VVVPLDESKLLDVSNNSFSGNPSYGRGNMHAS 252
Query: 258 KNNYKR 263
+ R
Sbjct: 253 RGRGDR 258
>IMGA|Medtr6g069740.1 Zinc finger, C4-type
chr06_pseudomolecule_IMGAG_V3 12973766-12974997 H
EGN_Mt090430 20090702
Length = 366
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 139/277 (50%), Gaps = 36/277 (12%)
Query: 24 NSDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTD 83
+S+ P +V+ PL+G+NY +WSRS+ AKNKL FI+G E P+ + W R +
Sbjct: 17 SSEGPNFVVVAPPLDGSNYIAWSRSMIRDFGAKNKLKFIDGSMEIPDEDDLNRNAWERCN 76
Query: 84 SMVVSWLLNSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYS 143
++ SW++NSIS IA+ ++ +A + W +L +R+ +
Sbjct: 77 HLIQSWIINSISLQIAQTLVFHENATDAWSDLKERF--------------------AKVT 116
Query: 144 ITVYFTKLKQKWDELASLKKFPVCS------CGAAKFFMDFENDSRLMQFLMGLNDSYDH 197
+ YFT++K W+EL S + P C+ C A + +F + +++QFL GLND ++
Sbjct: 117 VLEYFTEIKTLWEELNSHRPMPHCTCPHPCRCAAMREARNFRLEDQVIQFLTGLNDQFNV 176
Query: 198 VRNQILLMDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGNSGYKKRNFKDS 257
V+ Q+L++DPLPSINK YS+V++ E + ++ S ++ + R + S
Sbjct: 177 VKTQVLMLDPLPSINKVYSLVVQEESNNQSLSSPIDEPLSIVNVVESRKPQGRGRGYSHS 236
Query: 258 KNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYP 294
K + C C HT E ++ G+P
Sbjct: 237 ----------FKPPRHCSFCGKSNHTVEFFYQKHGHP 263
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 635 LIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQ 694
+IE QF V + +RTDNG+EFL + + SKGI+HQRS + TPQQNG VERKH+ +L
Sbjct: 1 MIENQFHVTPKIIRTDNGSEFL---LHEFYASKGILHQRSCVETPQQNGRVERKHQHILN 57
Query: 695 IARAFMFQGHFPKNFWSECLLAATHVINRIPTVVLDWKSPYEELNGKPPDISYFRTIGCL 754
I RA ++Q P +FWS L A +INRIPT VL SPY L PPDI+ F+ GCL
Sbjct: 58 IGRALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDITTFKVFGCL 117
Query: 755 CLATNTNPYK 764
C A++ ++
Sbjct: 118 CYASSLQSHR 127
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 1229 NLKLKPDECDLLKDPEQYRSLVGRLLYFNLTRPDVTYSVQQLSQFM 1274
++KL D+ L D YR LVGRLLY N TRPD+T+ QQLSQF+
Sbjct: 504 SIKLYHDDSPLYTDIPAYRRLVGRLLYLNATRPDITFITQQLSQFL 549
>IMGA|Medtr3g080970.1 Retrotransposon gag protein
chr03_pseudomolecule_IMGAG_V3 19236298-19236945 H
EGN_Mt090430 20090702
Length = 200
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 32 LVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLL 91
+V+ PL+G+NY W RS+ A KNK+ FI+ E PN R + ++ SW++
Sbjct: 25 IVAPPLDGSNYLGWRRSMVRAFGMKNKMKFIDVSMEIPNEKDLNPNVRERCNHLIQSWII 84
Query: 92 NSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYSITVYFTKL 151
NS+S IA+ R+ + + + +I++ QG+ + YFT++
Sbjct: 85 NSVSTQIAQTL---------------RFSKIDRIRIATLRSKINNVKQGSKYVLDYFTEM 129
Query: 152 KQKWDELASLKKFPVCSCG------AAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLM 205
K W+EL S P C+C A + +F + +++QFL GLND ++ V Q+L++
Sbjct: 130 KTLWEELNSHHPMPHCTCPHPCRCTAMRETRNFILEDQVIQFLTGLNDQFNVVNTQVLML 189
Query: 206 DPLPS 210
DPLPS
Sbjct: 190 DPLPS 194
>IMGA|Medtr8g005190.1 Integrase, catalytic region, related
chr08_pseudomolecule_IMGAG_V3 117969-116692 E
EGN_Mt090430 20090702
Length = 237
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 25/184 (13%)
Query: 155 WDELASLKKFPVC------SCGAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPL 208
WDEL L+ P C SC + ++N+ ++ FL GLND+Y +VR QILLMDPL
Sbjct: 5 WDELEDLRPTPSCVCAIPCSCKLSTSVRTYKNNEYILCFLKGLNDNYTNVRTQILLMDPL 64
Query: 209 PSINKAYSMVLR-----VEKQREMNHFTVESSESSAILLAQGNSGYKKRNFKDSKNNYKR 263
PSI+K YS+V++ E+ E N F V SS +S+ +GN G +
Sbjct: 65 PSISKTYSLVIQQDSTPTEQPSESNVFNVNSSSTSSA-QHKGNHGLG-----------RG 112
Query: 264 RESTGKENQFCDNCRTKGHTRETCFKIVGYPYWYYELKQKKGQSQAHIVDNAGETPFDVQ 323
R K + C NC HT E C+ G+P Y Q + +N G+ P
Sbjct: 113 RGKGPKTSMLCSNCNKTNHTVENCYFKHGFPPGYRSRNQLDAMKSS--FNNGGQEPKPTP 170
Query: 324 NENS 327
+ N+
Sbjct: 171 HPNN 174
>IMGA|Medtr3g068700.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr03_pseudomolecule_IMGAG_V3
16240238-16240810 H EGN_Mt090430 20090702
Length = 147
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 129 QITREISSFSQGNYSITVYFTKLKQKWDELASLKKFPVCSCG------AAKFFMDFENDS 182
++ EI++ QG+ +T +FT L+ W+EL + P C+C A + F +
Sbjct: 40 ELQEEIANLKQGSKKVTEFFTNLRGLWEELDQYRPMPQCTCPIQCTCLAVRNNKSFIAED 99
Query: 183 RLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMN 228
R+++FLMGLN+ Y V +Q+LLMDPLP IN+ +SMV++ E++ + N
Sbjct: 100 RIIKFLMGLNEDYQGVTSQVLLMDPLPQINRVFSMVMQQERKMQYN 145
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 618 MINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSIY 677
+ TK +V + +++ IE QF KV+ VRTDNG EFL D + SKGI HQ S +
Sbjct: 2 LCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP---DFYSSKGIEHQTSCVE 58
Query: 678 TPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLL 715
TPQQNG VERKH+ +L +ARA +FQ F F C L
Sbjct: 59 TPQQNGRVERKHQHILNVARAMLFQSKFMVLFSFACHL 96
>IMGA|Medtr1g137300.1 TIR-NBS-LRR type disease resistance protein,
related chr01_pseudomolecule_IMGAG_V3 30413365-30412803
H EGN_Mt090430 20090702
Length = 152
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 39/189 (20%)
Query: 37 LNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLLNSISK 96
+ G NY + S+++ L +KNK F++G +KP+S P++ W R + V+S + +IS
Sbjct: 1 MKGPNYATQSKAMIGVLESKNKFVFLDGTIKKPDSTDPLFPTWKRCNDFVLSGVRATISS 60
Query: 97 DIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYSITVYFTKLKQKWD 156
I E+ A LW E TKLK D
Sbjct: 61 LIQESIEDITDASVLWQE----------------------------------TKLKNLLD 86
Query: 157 ELASLKKFPVC--SCGAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKA 214
ELA + C +C A +D ++ + FL GLND++ R++IL +DP+P +++A
Sbjct: 87 ELALFRPISRCRSTCYAYDTAIDHRSEDETLYFLQGLNDNFAATRSEILGIDPIPVLDEA 146
Query: 215 YSMVLRVEK 223
+S R+EK
Sbjct: 147 FS---RIEK 152
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%)
Query: 597 ITGAKFMVTIVEDKSRYTWVYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFL 656
+ GA++ V ++D S +TW+YMI +H++ + ++ ++I+TQF ++ R DN E+
Sbjct: 1 MGGARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYR 60
Query: 657 NTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQIARAFMFQGHFP 706
+++ +G + S YT QQ G ERKHR +L A + P
Sbjct: 61 DSKLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISASCP 110
>IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related
chr05_pseudomolecule_IMGAG_V3 21011474-21012209 E
EGN_Mt090430 20090702
Length = 210
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 390 WIIDTGCTDHMTYNISFF-DTLHKLAKPKSVKLPDGAIKLVHYIGTIKLNDRIILTNVLY 448
WI+D+G ++HMT + + D + P V LP+ GT+KL D + L NVLY
Sbjct: 36 WILDSGASNHMTGTLQYMHDVKEVIGCP--VGLPNCRTTTCTKEGTVKLTDGLRLENVLY 93
Query: 449 IPSFKCNLISVTSLTKTNKIAVKSLPNCSIFQDLQSNEKIAIGHEQDGLYLLNKKSFDIV 508
+P CNLIS++ L V+ N QD S I G ++DGLY +
Sbjct: 94 VPKLNCNLISISQLLDELNCNVQFNGNFCAIQDRTSKMLIGAGEQRDGLYFFRE------ 147
Query: 509 SSKCMTTCTENSRKIQNFKLWHSRLGHVS 537
K E + +++ +WH RLGH S
Sbjct: 148 VPKVKACKVEGTNQLE---VWHKRLGHPS 173
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 557 CSICPISKQSRVPFPTNV-TKSEKLFQLIHIDLWGPYGVQSITGAKFMVTIVEDKSRYTW 615
C+IC + K SR F + + +++ + ++H D++GP V + +G ++ +T V++ S+ W
Sbjct: 15 CNICLVGKHSRSAFKSELKMRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDEYSKMLW 74
Query: 616 VYMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSS 675
+Y+I K V + L E Q G+K++ + T G E+ + ++GI+H+ ++
Sbjct: 75 LYLIKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSKDFESYCTNQGIIHEVTT 134
Query: 676 IYTP 679
YTP
Sbjct: 135 PYTP 138
>IMGA|Medtr3g079600.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 18487435-18487012 H
EGN_Mt090430 20090702
Length = 111
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 60/130 (46%), Gaps = 33/130 (25%)
Query: 557 CSICPISKQSRVPFPTNVTKSEKLFQLIHIDLWGPYGVQSITGAKFMVTIVEDKSRYTWV 616
C+ICP++K R+P + S F LIH D+WGPYG KS Y
Sbjct: 15 CTICPLAKFKRLPLCSKNNFSPYSFDLIHCDIWGPYG----------------KSTYNDT 58
Query: 617 YMINTKHQVCSVLSHYLQLIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSI 676
+ L++TQFG ++ + T+N EF TQ KG +HQ S
Sbjct: 59 TV--------------FYLVKTQFGKVIKAIHTNNAKEFARTQ---FLHDKGTIHQYSYP 101
Query: 677 YTPQQNGVVE 686
YTP+QN VVE
Sbjct: 102 YTPEQNSVVE 111
>IMGA|Medtr3g083340.1 Integrase, catalytic region, related
chr03_pseudomolecule_IMGAG_V3 19557937-19559015 H
EGN_Mt090430 20090702
Length = 294
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 130/331 (39%), Gaps = 87/331 (26%)
Query: 181 DSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMNHF-----TVESS 235
D L QFL GLND + V+ Q+LLM+PLP +N+ YS+V++ E + T+++S
Sbjct: 11 DPVLPQFLTGLNDQFSIVQTQVLLMEPLPCLNRVYSLVIQEESKDVFESVILMNPTLDNS 70
Query: 236 ESSAILLAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYPY 295
S +G S + S+G +++ C C GHT +TC+K G+P
Sbjct: 71 ADSKKFPGKGKSSF----------------SSGYKSKLCTFCGRHGHTVDTCYKKHGFPP 114
Query: 296 WYYELKQ----KKGQSQAHIVDNAGETPFDVQNENSKGP--TAEWSENLTKIIQQEVMKA 349
+ + + H+ +N E P VQ +S GP T E + L +I K
Sbjct: 115 NFGQNSSVNNVESLLDNVHVAENV-EEPSKVQ--SSSGPMFTQEQFDRLLALIPPHSEKK 171
Query: 350 MKGKQMMTVTDENVYVNNCSFTGTASNKVFKGTDDKNIGEWIIDTGCTDHMTYNISFFDT 409
Q+ + ++ +N DH+ ++S F +
Sbjct: 172 HLANQITSHASTVIHHLILLLQILVTN---------------------DHVCSSLSSFSS 210
Query: 410 LHKLAKPKSVKLPDGAIKLVHYIGTIKLNDRIILTNVLYIPSFKCNLISVTSLTKTNKIA 469
HK KP +V+LP+ + GTI L
Sbjct: 211 FHK-NKPINVQLPNDSCVSAEIAGTIGLT------------------------------- 238
Query: 470 VKSLPNCSIFQDLQSNEKIAIGHEQDGLYLL 500
PN ++F D +S I + ++DGLY L
Sbjct: 239 ----PNITLFNDSRSKRMIGLTEQRDGLYKL 265
>IMGA|Medtr3g083290.1 Integrase, catalytic region, putative
chr03_pseudomolecule_IMGAG_V3 19547512-19547931 H
EGN_Mt090430 20090702
Length = 139
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 21/119 (17%)
Query: 181 DSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYSMVLRVEKQREMNHF-----TVESS 235
D L QFL GLND + V+ Q+LLM+PLP +N+ YS+V++ E + T+++S
Sbjct: 11 DPVLPQFLTGLNDQFSIVQTQVLLMEPLPCLNRVYSLVIQEESKDVFESVILMNPTLDNS 70
Query: 236 ESSAILLAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCDNCRTKGHTRETCFKIVGYP 294
S +G S + S+G +++ C C GHT +TC+K G+P
Sbjct: 71 ADSKKFPGKGKSSF----------------SSGYKSKLCTFCGRHGHTVDTCYKKHGFP 113
>IMGA|Medtr5g032700.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr05_pseudomolecule_IMGAG_V3
13269922-13268996 E EGN_Mt090430 20090702
Length = 213
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 19/144 (13%)
Query: 33 VSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLLN 92
V+ L +NY +WSRS+ AL AK KL FI+G P + W R ++ SW+LN
Sbjct: 31 VTSLLIESNYLAWSRSMQRALGAKTKLSFIDGSIRVPAIDDLTRGAWERCIHLIHSWILN 90
Query: 93 SISKDIAEAFLY--------SNSAKELWDELFQRYGDSNGPLLYQITR-EISSFSQGNYS 143
S+S I++ ++ NS K+ DS + I R I++ QG+
Sbjct: 91 SVSPQISQTIIFHVHVIDFGKNSKKDF-------KADS---IRVSILRYAINNLKQGSKY 140
Query: 144 ITVYFTKLKQKWDELASLKKFPVC 167
+ YFTK+K W+EL S + P C
Sbjct: 141 VLDYFTKMKTLWEELNSQRPTPNC 164
>IMGA|Medtr5g007330.1 Integrase, catalytic region, related
chr05_pseudomolecule_IMGAG_V3 1052977-1052588 H
EGN_Mt090430 20090702
Length = 129
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 24/125 (19%)
Query: 151 LKQKWDELASLKKFPVCSC------GAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILL 204
+K W EL L+ P CSC + + +++N ++ FL GLN +Y +VR QILL
Sbjct: 1 MKILWYELEDLRPTPSCSCVNPCTCSLSNYVHNYKNMEYIICFLKGLNANYSNVRTQILL 60
Query: 205 MDPLPSINKAYSMVLRVEKQREMNHFTVESSESSAILLAQGNSGYKKRNFKDSKNNYKRR 264
MDPLPSI+K YS V Q+ NH S +S+A+ + N+ + KN +
Sbjct: 61 MDPLPSISKVYSSV----SQQGFNH----SDDSTAVSI----------NYTNPKNLSNQS 102
Query: 265 ESTGK 269
+ GK
Sbjct: 103 KGRGK 107
>IMGA|AC137826_20.1 hypothetical protein AC137826.21 78161-79047 H
EGN_Mt090430 20090702
Length = 157
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 34/145 (23%)
Query: 151 LKQKWDELASLKKFPVCSCGAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPS 210
+ ++ DE S+ C+C +K +MD + + F MGLND Y H R QIL+M P+
Sbjct: 33 VSKELDEFDSIVPPTSCNCAKSKEYMDSMFRLKPLHFFMGLNDKYSHTRCQILMMSEPPT 92
Query: 211 INKAYSMVLRVEKQREM--NHFTVESSESSAILLAQGNSGYKKRNFKDSKNNYKRRESTG 268
+N+ Y+M+++ + QRE+ + + +E L G G+
Sbjct: 93 VNQCYAMIIQDKSQRELSSDQYRIECQTDPTALFT-GRPGH------------------- 132
Query: 269 KENQFCDNCRTKGHTRETCFKIVGY 293
GH +E C+ ++GY
Sbjct: 133 ------------GHLKEFCYHLIGY 145
>IMGA|Medtr6g036540.1 Zinc finger, CCHC-type
chr06_pseudomolecule_IMGAG_V3 8117470-8116658 H
EGN_Mt090430 20090702
Length = 270
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 33 VSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPN-SNSPVYEKWMRTDSMVVSWLL 91
+++ LNG+NY+ W ++ L+ + ++ G + P S + E+W + +++W
Sbjct: 10 ITITLNGSNYNQWPEAMCGFLKGRRLWRYVTGDKKCPTISLAEKLEEWDSKNHQIITWCR 69
Query: 92 NSISKDIAEAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSF-SQGNYSITVYFTK 150
+ + I F +AKE+WD L QRY S+ YQ+ +++S+ Q + + +
Sbjct: 70 KTSTPSIHLQFGRFENAKEVWDYLKQRYTISDLSHQYQLLKDLSNLKQQSGQPVYEFLAQ 129
Query: 151 LKQKWDELASLKKF 164
++ W++LAS + F
Sbjct: 130 MEIIWNQLASCEPF 143
>IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 21314429-21315168 H
EGN_Mt090430 20090702
Length = 210
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 635 LIETQFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQ 694
L+E QFG KV++++ DNG EF ++ + +++GI TPQQN V +R +++LL+
Sbjct: 17 LLENQFGKKVKRLQIDNGLEFCWSEFNEFCKTEGISRHHMVRNTPQQNSVAKRMNQTLLE 76
Query: 695 IARAFMFQGHFPKNFWSECLLAAT 718
AR + + FW E T
Sbjct: 77 RARCMLSNAGLTRTFWGETGFGCT 100
>IMGA|CU179634_23.1 hypothetical protein CU179634.6 85266-85502 H
EGN_Mt090430 20090702
Length = 78
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 25 SDHPGLNLVSVPLNGNNYHSWSRSITIALRAKNKLDFINGRYEKPNSN 72
SD+PG LV VP NG +HSW RS+ +L KNKL FING ++P N
Sbjct: 30 SDNPGAVLVPVPFNGTGFHSWRRSVLRSLSVKNKLVFINGECKRPEVN 77
>IMGA|Medtr5g029040.1 LTRGag-pol-polymerase 3, related
chr05_pseudomolecule_IMGAG_V3 12052697-12051982 H
EGN_Mt090430 20090702
Length = 223
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 29/239 (12%)
Query: 41 NYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVYE--KWMRTDSMVVSWLLNSISKDI 98
+Y SW+ + L A N D + + P N+ V E +W D++V W+ ++IS D+
Sbjct: 5 HYDSWAE---LFLNAANAFDVAD--HIIPPKNATVKEDAQWSCLDAIVKQWIYSTISIDL 59
Query: 99 AEAFLYSNS-AKELWDELFQRYGDSNGPLLYQITREISSFSQGNY-SITVYFTKLKQKWD 156
L + A+E W+ L + D+ + ++ S NY + + Y LK +
Sbjct: 60 LHTILKPGATAQEAWNRLKDIFHDNKNSRAVYLEQQFSQIHMDNYPNASSYCQALKLIAE 119
Query: 157 ELASLKKFPVCSCGAAKFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAYS 216
+L ++ PV D +++ + GL+ YD + I +DPLPS KA S
Sbjct: 120 QLGNVGA-PVSE------------DRLVLRLVTGLSSGYDSLATIIQQLDPLPSFYKARS 166
Query: 217 MVLRVEKQREMNHFTVESSESSAILLAQGN--SGYKKRNFKDSKNNYKRRESTGKENQF 273
M+ E +R N + SA++ Q + S R+ + + + Y R + G+ Q+
Sbjct: 167 MLTLEETRRNKN-----TGAESALVHTQSDVSSAAPNRSSEVAPSRYSNRNTGGRGKQY 220
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 678 TPQQNGVVERKHRSLLQIARAFMFQGHFPKNFWSECLLAATHVINRIPTVVLDWKSPYEE 737
TPQ NGV ER +++LL+ AR + + FW+E + +++NR P ++ K+ YE
Sbjct: 5 TPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTLYEL 64
Query: 738 LNGKPPDISYFRTIGC 753
GK D S R GC
Sbjct: 65 WPGKSVDYSNLRVFGC 80
>IMGA|Medtr1g102740.1 gag-pol polyprotein, related
chr01_pseudomolecule_IMGAG_V3 21153367-21155226 E
EGN_Mt090430 20090702
Length = 234
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 390 WIIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIKLNDR----IILTN 445
W++D+GCT H TY+ + F L K K+ + +GA + IGT+++ R +IL N
Sbjct: 13 WVVDSGCTTHSTYDRNLFKELKKTTNTKAT-IANGAYIPIEGIGTVEIESRSGVKLILNN 71
Query: 446 VLYIPSFKCNLISVTSL 462
V YIP +L+SV L
Sbjct: 72 VNYIPENCYSLLSVAGL 88
>IMGA|Medtr6g077060.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr06_pseudomolecule_IMGAG_V3 15141903-15146629 E
EGN_Mt090430 20090702
Length = 1200
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 22/261 (8%)
Query: 471 KSLPNCSIFQDLQSNEKIAIGHEQDGLYLLNKKSFDIVSSKCMTT--CTENSRKIQNFKL 528
+ P+ + QD ++ ++A +G +L K+++D+V +C+ + + +
Sbjct: 741 REYPSGASKQDKKTLRRLASRFLLNG-DILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTF 799
Query: 529 WHSRLGHVSNQRLRYAG----VLDHDELC---DIVCSICPI--SKQSRVPFPTNVTKSEK 579
GH +++L AG ++HD C C C I K P NV S
Sbjct: 800 GTHATGHTMSRKLLRAGYYWMAMEHD--CYQYARKCHKCQIYADKIHVPPHALNVISSPW 857
Query: 580 LFQLIHIDLWGPYGVQSITGAKFMVTIVEDKSRYTWVYMINTKHQVCSVLSHYLQL-IET 638
F + ID+ G ++ G +F++ ++ ++ WV + + V++ +++ I
Sbjct: 858 PFSMWGIDMIGRIEPKASNGHRFILVAIDYFTK--WVEAASYANVTKQVVAKFIKNNIIC 915
Query: 639 QFGVKVQKVRTDNGTEFLNTQCRDLFQSKGIMHQRSSIYTPQQNGVVERKHRSLLQIARA 698
++GV K+ TDNGT N + L + I H SS Y PQ NG VE ++++ +I +
Sbjct: 916 RYGVP-SKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQK 974
Query: 699 FMFQGHFPKNFWSECLLAATH 719
+ W E L A H
Sbjct: 975 MVTT----YKDWHEMLPYALH 991
>IMGA|Medtr4g157500.1 polyprotein-like, putative
chr04_pseudomolecule_IMGAG_V3 39269652-39268814 H
EGN_Mt090430 20090702
Length = 260
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 1223 SSTYTFNLKLKPDECDLLKDPEQYRSLVGRLLYFNLTRPDVTYSVQQLSQFM 1274
S++ +LKL D +D YR L+GRLLY N TRPD+T+ QQLSQF+
Sbjct: 88 STSSDASLKLHNDSSPPYEDIPSYRRLIGRLLYLNSTRPDITFITQQLSQFL 139
>IMGA|Medtr6g086670.1 gag-pol polyprotein, related
chr06_pseudomolecule_IMGAG_V3 17772429-17771671 H
EGN_Mt090430 20090702
Length = 252
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 390 WIIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIKLND----RIILTN 445
W ID+G T HMTY+ +FF L+K A + + +GA V IGTI + + ++IL N
Sbjct: 13 WHIDSGATHHMTYDRNFFKELNKTAISYNFIVANGAPIEVEGIGTITIRNHSGLKLIL-N 71
Query: 446 VLYIPSFKCNLISVTSL 462
VLY+P+ +++SV L
Sbjct: 72 VLYVPNLTSSVLSVPQL 88
>IMGA|Medtr1g102780.1 gag-pol polyprotein, related
chr01_pseudomolecule_IMGAG_V3 21184395-21181931 E
EGN_Mt090430 20090702
Length = 311
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 390 WIIDTGCTDHMTYNISFFDTLHKLAKPKSVKLPDGAIKLVHYIGTIKLNDR----IILTN 445
W++++GCT H TY+ + F L K K+ + +GA + IGT+++ R +IL N
Sbjct: 36 WVVESGCTTHSTYDRNLFKELKKTTNTKAT-IANGAYIPIEGIGTVEIESRSGVKLILNN 94
Query: 446 VLYIPSFKCNLISVTSL 462
V YIP +L+SV L
Sbjct: 95 VNYIPENCYSLLSVAGL 111
>IMGA|Medtr6g038710.1 Integrase core domain containing protein,
related chr06_pseudomolecule_IMGAG_V3 8393573-8392519 H
EGN_Mt090430 20090702
Length = 295
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 25/252 (9%)
Query: 41 NYHSWSRSITIALRAKNKLDFINGRYEKPNSNSPVY-EKWMRTDSMVVSWLLNSISKDIA 99
NY+ W+ ++ + + D + ++ + +Y KW + D+ + + L SI+ +
Sbjct: 28 NYNIWAGAVRLWFHGQGLEDHLT---KQAKDIATIYCTKWKQVDASLCNVLWFSITPHLQ 84
Query: 100 EAFLYSNSAKELWDELFQRYGDSNGPLLYQITREISSFSQGNYSITVYFTKLKQKWDELA 159
+ + E W+++ + + + + LY + ++S N + Y +KL
Sbjct: 85 AQYQAFTTCYEAWEKVKKVFSN-DVHRLYSVVNSLNSLKLENMDVQAYLSKLDSLKANFQ 143
Query: 160 SLKKFPVCSCGAA----KFFMDFENDSRLMQFLMGLNDSYDHVRNQILLMDPLPSINKAY 215
+L F + A KFFM + L+GL D VRNQIL +P
Sbjct: 144 TLMPFISDATNHAEQRSKFFM--------VMVLVGLPPELDSVRNQILSGSTVPDYETVS 195
Query: 216 SMVLRVEKQREMNHFTVESSESSAILLAQGNSGYKKRNFKDSKNNYKRRESTGKENQFCD 275
+LR+ H + S S+ L + N G RN ++ + R S C+
Sbjct: 196 EQLLRLATPHAFGHVSTPSPNDSSALASHYN-GRGGRNA--GRSGHGSRSSVR-----CN 247
Query: 276 NCRTKGHTRETC 287
C H + C
Sbjct: 248 YCNRYSHIKADC 259
>IMGA|Medtr5g076530.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr05_pseudomolecule_IMGAG_V3
28013549-28012814 E EGN_Mt090430 20090702
Length = 98
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 53/94 (56%)
Query: 52 ALRAKNKLDFINGRYEKPNSNSPVYEKWMRTDSMVVSWLLNSISKDIAEAFLYSNSAKEL 111
AL KNK F++G P+++ + R +++V +W++NS+S IA++ + + ++
Sbjct: 4 ALAMKNKFKFVDGFIPIPDADDLNCAAYERCNNLVHTWIINSVSPSIAQSVVSIENVVDM 63
Query: 112 WDELFQRYGDSNGPLLYQITREISSFSQGNYSIT 145
W++L R+ + Q+ +E ++ QGN I+
Sbjct: 64 WNDLKDRFMRCGRIRVAQLQQENANLKQGNRKIS 97