Jatropha Genome Database
- JcCA0257171.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0257171.20 - phase: 0 /pseudo/partial
(239 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g103040.1 Heat shock protein Hsp20 chr03_pseudomolecu... 182 1e-46
IMGA|Medtr3g069230.1 Heat shock protein Hsp20 chr03_pseudomolecu... 142 1e-34
IMGA|Medtr3g122960.2 Heat shock protein Hsp20 chr03_pseudomolecu... 110 4e-25
IMGA|Medtr3g122960.1 Heat shock protein Hsp20 chr03_pseudomolecu... 108 2e-24
IMGA|Medtr5g088740.1 Heat shock protein Hsp20 chr05_pseudomolecu... 65 4e-11
IMGA|Medtr6g067230.1 HSP20-like chaperone chr06_pseudomolecule_I... 62 3e-10
IMGA|Medtr4g124600.1 HSP20-like chaperone chr04_pseudomolecule_I... 61 4e-10
IMGA|Medtr6g067320.1 HSP20-like chaperone chr06_pseudomolecule_I... 60 7e-10
IMGA|Medtr5g085810.1 Heat shock protein Hsp20 chr05_pseudomolecu... 59 2e-09
IMGA|Medtr7g034960.1 Heat shock protein Hsp20 chr07_pseudomolecu... 57 7e-09
IMGA|Medtr7g034990.1 Heat shock protein Hsp20 chr07_pseudomolecu... 57 9e-09
IMGA|Medtr7g124360.1 Heat shock protein Hsp20 chr07_pseudomolecu... 54 7e-08
IMGA|Medtr7g034970.1 Heat shock protein Hsp20 chr07_pseudomolecu... 51 4e-07
IMGA|Medtr6g022470.1 HSP20-like chaperone chr06_pseudomolecule_I... 50 1e-06
IMGA|Medtr4g005460.1 HSP20-like chaperone chr04_pseudomolecule_I... 50 1e-06
IMGA|Medtr4g121500.1 HSP20-like chaperone chr04_pseudomolecule_I... 49 2e-06
IMGA|Medtr4g121620.1 HSP20-like chaperone chr04_pseudomolecule_I... 49 3e-06
>IMGA|Medtr3g103040.1 Heat shock protein Hsp20
chr03_pseudomolecule_IMGAG_V3 25274000-25272930 F
EGN_Mt090430 20090702
Length = 221
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 127/207 (61%), Gaps = 25/207 (12%)
Query: 46 FIVKAKAAENRDNLYHLRKAXXXXXXXXXXXXXXXAPVAPVGLWDRFPTARTVQQXXXXX 105
F V+A E R+ L H+ ++ P AP+GLWDRFPT RTVQ+
Sbjct: 27 FRVRAMTGEAREKLDHVSRSNNIKHHQSQPKKRVF-PAAPIGLWDRFPTTRTVQEMMETM 85
Query: 106 XXXXXDPFAY-TATWPSEP-PSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVK 163
DPFA T WPS P P RGRTPWEIKEGE+EYKMRFDMPGM KEDVK
Sbjct: 86 ESMMEDPFAMSTIEWPSSPLPIEGVGGYRRRGRTPWEIKEGESEYKMRFDMPGMNKEDVK 145
Query: 164 -----------AEKVPEKNNVNGAQNGIEEEEEGGWSAKSYGKYSCRIALPENIQFEKIK 212
AEK P+K N +E+EE WS KSYG+YS RIALPEN+QFE IK
Sbjct: 146 VWVEEKMLVVKAEKAPKKKN--------DEDEE--WS-KSYGRYSSRIALPENVQFENIK 194
Query: 213 AEVKDGVLYITIPKASTTGKILDINVQ 239
AEVKDGVLYITIPKA+T K+LDI+VQ
Sbjct: 195 AEVKDGVLYITIPKATTYSKVLDISVQ 221
>IMGA|Medtr3g069230.1 Heat shock protein Hsp20
chr03_pseudomolecule_IMGAG_V3 16534178-16535317 E
EGN_Mt090430 20090702
Length = 235
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 106/169 (62%), Gaps = 17/169 (10%)
Query: 84 APVGLWDRFPTARTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVERSGYSRGRTPWEIKE 143
+P L ++FP ARTVQQ +P Y + P VE +++G+ PW IKE
Sbjct: 71 SPRVLLNQFPVARTVQQMMDTMDRIVENPLVYND---NSPWIVVENGEHNKGKIPWAIKE 127
Query: 144 GETEYKMRFDMPGMTKEDVK-----------AEKVPEKNNVNGAQNGIEE--EEEGGWSA 190
G+ +YK+RF+MPGM K+DVK AEKV + + G NG E E+ W A
Sbjct: 128 GQNDYKIRFNMPGMNKKDVKVWIEEKMLVVKAEKVAREQH-QGQANGRGELSSEDEDWPA 186
Query: 191 KSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPKASTTGKILDINVQ 239
SYG+Y+ RI+LPENI+FEKIKA+V+DGVLY+TIPKA T+ K++ I+VQ
Sbjct: 187 NSYGRYNHRISLPENIEFEKIKAQVRDGVLYVTIPKAKTSAKVIGIDVQ 235
>IMGA|Medtr3g122960.2 Heat shock protein Hsp20
chr03_pseudomolecule_IMGAG_V3 30727393-30726084 F
EGN_Mt090430 20090702
Length = 235
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 89/160 (55%), Gaps = 21/160 (13%)
Query: 83 VAPVGLWDRFPTARTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVERSGYSRGRTPWEIK 142
++P GL D + R+++Q D + G R PW+IK
Sbjct: 94 ISPFGLLDPWSPMRSMRQMLDTMDRIFEDTMTF---------------GGGEIRVPWDIK 138
Query: 143 EGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEG---GWSAKSYGKYSCR 199
+ E E KMRFDMPG++KEDV KV +N+V ++ + +EE G WS KSY Y R
Sbjct: 139 DEENEIKMRFDMPGLSKEDV---KVSVENDVLVIKSDMHKEESGEEDSWSRKSYSSYDTR 195
Query: 200 IALPENIQFEKIKAEVKDGVLYITIPKASTTGKILDINVQ 239
+ LP+N + +K+KAE+K+GVLYIT+PK K++D+ +Q
Sbjct: 196 LKLPDNCEKDKVKAELKNGVLYITVPKTKVERKVIDVQIQ 235
>IMGA|Medtr3g122960.1 Heat shock protein Hsp20
chr03_pseudomolecule_IMGAG_V3 30727393-30726084 F
EGN_Mt090430 20090702
Length = 266
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 136 RTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEG---GWSAKS 192
R PW+IK+ E E KMRFDMPG++KEDV KV +N+V ++ + +EE G WS KS
Sbjct: 163 RVPWDIKDEENEIKMRFDMPGLSKEDV---KVSVENDVLVIKSDMHKEESGEEDSWSRKS 219
Query: 193 YGKYSCRIALPENIQFEKIKAEVKDGVLYITIPKASTTGKILDINVQ 239
Y Y R+ LP+N + +K+KAE+K+GVLYIT+PK K++D+ +Q
Sbjct: 220 YSSYDTRLKLPDNCEKDKVKAELKNGVLYITVPKTKVERKVIDVQIQ 266
>IMGA|Medtr5g088740.1 Heat shock protein Hsp20
chr05_pseudomolecule_IMGAG_V3 34441852-34442552 F
EGN_Mt090430 20090702
Length = 150
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 111 DPFAYTATWPSE--PPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVP 168
DPF+ P + P S E + + R W KE + + D+PG+ KE+VK E +
Sbjct: 17 DPFSMDIWDPLQGFPSSARETTALANTRVDW--KETQEAHVFSVDLPGLKKEEVKVE-IE 73
Query: 169 EKN--NVNGAQNGIEEEEEGGWS--AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITI 224
+ N ++G +N +EE++ W +S GK+ R LPEN++ +++KA +++GVL +T+
Sbjct: 74 DGNVLQISGERNKEQEEKDDKWHRVERSSGKFMRRFRLPENVKMDQVKAGMENGVLTVTV 133
Query: 225 P 225
P
Sbjct: 134 P 134
>IMGA|Medtr6g067230.1 HSP20-like chaperone
chr06_pseudomolecule_IMGAG_V3 12439558-12440101 F
EGN_Mt090430 20090702
Length = 159
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 113 FAYTATWPSEPPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKN- 171
F T + S P E S ++ R W KE + + D+PG+ KE+VK E ++
Sbjct: 30 FPLTNSALSASSFPQENSAFASTRIDW--KETPEAHVFKADLPGLKKEEVKVEIEDDRVL 87
Query: 172 NVNGAQNGIEEEEEGGWS--AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPK 226
++G +N +E++ W +S GK+ R LPEN + +++KA +++G+L +T+PK
Sbjct: 88 QISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGILTVTVPK 144
>IMGA|Medtr4g124600.1 HSP20-like chaperone
chr04_pseudomolecule_IMGAG_V3 29197529-29198773 F
EGN_Mt090430 20090702
Length = 159
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 113 FAYTATWPSEPPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKN- 171
F++ + S P E S + R W KE + + D+PG+ KE+VK E ++
Sbjct: 30 FSFPNSALSASSFPQENSAFVSTRIDW--KETPEAHVFKADLPGLKKEEVKVEIEDDRVL 87
Query: 172 NVNGAQNGIEEEEEGGWS--AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPK 226
++G +N +E++ W +S GK+ R LPEN + +++KA +++GVL +T+PK
Sbjct: 88 QISGERNVEKEDKNNQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK 144
>IMGA|Medtr6g067320.1 HSP20-like chaperone
chr06_pseudomolecule_IMGAG_V3 12466076-12466807 F
EGN_Mt090430 20090702
Length = 159
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 113 FAYTATWPSEPPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKN- 171
F T + S P E S + R W KE + + D+PG+ KE+VK E ++
Sbjct: 30 FPLTNSALSASSFPQENSAFVSTRIDW--KETPEAHVFKADLPGLKKEEVKVEIEGDRVL 87
Query: 172 NVNGAQNGIEEEEEGGWS--AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPK 226
++G +N +E++ W +S GK+ R LPEN + +++KA +++GVL +T+PK
Sbjct: 88 QISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK 144
>IMGA|Medtr5g085810.1 Heat shock protein Hsp20
chr05_pseudomolecule_IMGAG_V3 32829377-32830386 F
EGN_Mt090430 20090702
Length = 142
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 125 SPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEE 184
+P+ R GYS + E T + ++ ++PG K+++K + + E N ++ G++EE
Sbjct: 18 TPIFR-GYSGSTALLDWIESPTSHILKINVPGFNKDEIKVQ-IEEGNILHVRGEGVKEEN 75
Query: 185 EGG---WSAKSYG----KYSCRIALPENIQFEKIKAEVKDGVLYITIPKAST--TGKILD 235
G W A G +S I LPEN++ ++IKA V++GVL + +PK ++ + K+ +
Sbjct: 76 LGKDIVWHAAERGIGKRDFSRMIELPENVKLDQIKAHVENGVLTVLVPKDASPKSHKVRN 135
Query: 236 INV 238
IN+
Sbjct: 136 INI 138
>IMGA|Medtr7g034960.1 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V3 8472725-8473497 F
EGN_Mt090430 20090702
Length = 193
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 29/148 (19%)
Query: 88 LW-DRFPTA-RTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVERSGYSRGRTPWEIKEGE 145
LW DRFP R ++Q PF PS SP R W KE
Sbjct: 44 LWSDRFPDPFRVLEQI----------PFGVEKNEPSMSLSP--------ARVDW--KETP 83
Query: 146 TEYKMRFDMPGMTKEDVKAEKVPEKNNV---NGAQNGIEEEEEGGWS--AKSYGKYSCRI 200
+ + FD+PG+ K+++K E E+N V +G + EE++ W +SYGK+ +
Sbjct: 84 EGHVIMFDVPGIRKDEIKIEV--EENRVLRVSGERKKEEEKQGDHWHRVERSYGKFWRQF 141
Query: 201 ALPENIQFEKIKAEVKDGVLYITIPKAS 228
LPEN+ + +KA++++GVL +T+ K S
Sbjct: 142 RLPENVDLDSVKAKMENGVLTLTLNKLS 169
>IMGA|Medtr7g034990.1 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V3 8484570-8483703 E
EGN_Mt090430 20090702
Length = 187
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 28/147 (19%)
Query: 88 LWDRFPTA-RTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVERSGYSRGRTPWEIKEGET 146
L DRFP R ++Q PF T PS SP R W KE
Sbjct: 39 LSDRFPDPFRVLEQI----------PFGVEKTEPSMTMSP--------ARVDW--KETPD 78
Query: 147 EYKMRFDMPGMTKEDVKAEKVPEKNNV---NGAQNGIEEEEEGGWS--AKSYGKYSCRIA 201
+ + D+PG+ K+++K E E+N V +G + EE++ W +SYGK+ +
Sbjct: 79 GHVIMLDVPGIRKDEIKIEV--EENRVLRVSGERKKEEEKQGDHWHRVERSYGKFWRQFR 136
Query: 202 LPENIQFEKIKAEVKDGVLYITIPKAS 228
LPEN+ + +KA++++GVL +T+ K S
Sbjct: 137 LPENVDLDSVKAKMENGVLTLTLNKLS 163
>IMGA|Medtr7g124360.1 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V3 29170303-29171674 E
EGN_Mt090430 20090702
Length = 184
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 14/82 (17%)
Query: 150 MRFDMPGMTKEDVKAEKVPEKNNVN----GAQNGIEEEEEGGWSAKSYGKYSCRIALPEN 205
+R D PG+ KEDVK E+N + GA+ EE EEGG K+S RI LPE
Sbjct: 98 LRLDTPGLGKEDVKIS--VEQNTLTIKGEGAKES-EEVEEGGR------KFSSRIDLPEK 148
Query: 206 I-QFEKIKAEVKDGVLYITIPK 226
+ + ++IKAE+K+GVL + +PK
Sbjct: 149 LYKIDQIKAEMKNGVLKVIVPK 170
>IMGA|Medtr7g034970.1 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V3 8475364-8475953 E
EGN_Mt090430 20090702
Length = 195
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 142 KEGETEYKMRFDMPGMTKEDVKAEKVPEKN-NVNGAQNGIEEEEEGGW--SAKSYGKYSC 198
KE E+ + D+PG K+++K E V +V G + E++ W + + YGK+
Sbjct: 73 KETSDEHVIMIDVPGFRKDEIKIEVVGNSVLSVIGERKKEVEKKGDRWHRAERMYGKFWR 132
Query: 199 RIALPENIQFEKIKAEVKDGVLYITIPKASTTGKILDINV 238
++ LPEN F+ +KA+V++GVL +T+ K S +I I V
Sbjct: 133 QLRLPENADFDSVKAKVENGVLILTLNKLSHEYQIKSIRV 172
>IMGA|Medtr6g022470.1 HSP20-like chaperone
chr06_pseudomolecule_IMGAG_V3 5009387-5008068 E
EGN_Mt090430 20090702
Length = 139
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 137 TPWEIKEGETEYKMRFDMPGMTKEDVKAE----KVPEKNNVNGAQNGIEEEEEGGWSA-- 190
TP + KE + + D+PG+ KEDV E KV + + +E++ W
Sbjct: 28 TPTDWKETKDAHVFISDLPGLKKEDVNVEIDEGKVLQISGERTHNVDENDEKDNKWHHVE 87
Query: 191 KSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPK 226
+ GK+ R LP+N + +++KA +++GVL +TIPK
Sbjct: 88 RCRGKFQRRFRLPQNAKVDQVKANMENGVLIVTIPK 123
>IMGA|Medtr4g005460.1 HSP20-like chaperone
chr04_pseudomolecule_IMGAG_V3 239321-241036 E
EGN_Mt090430 20090702
Length = 231
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 10/101 (9%)
Query: 137 TPWE----IKEGETEYKMRFDMPGMTKEDVKAE------KVPEKNNVNGAQNGIEEEEEG 186
TPW +KE + YK+++DMPG+ KE+V + ++ G ++++
Sbjct: 118 TPWSLSGRVKESDNHYKLKYDMPGIPKENVNITIGDGVLTIKGEHKEEKEGGGDDDDDNE 177
Query: 187 GWSAKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPKA 227
+S+ SYG Y+ + LP++ + ++IKAE+KDGVL +TIP++
Sbjct: 178 YFSSSSYGYYNTSLVLPDDAKVDEIKAELKDGVLIVTIPRS 218
>IMGA|Medtr4g121500.1 HSP20-like chaperone
chr04_pseudomolecule_IMGAG_V3 28512514-28510724 E
EGN_Mt090430 20090702
Length = 120
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 153 DMPGMTKEDVKAEKVPEKN-NVNGAQNGIEEEEEGGWS--AKSYGKYSCRIALPENIQFE 209
D PGM KE+ K E ++ ++G ++ +E++ W +S GK+ R+ LPEN + +
Sbjct: 27 DFPGMKKEEAKVEIEDDRVLQISGKRSVEKEDKNDQWHPVERSSGKFMRRLRLPENAKMD 86
Query: 210 KIKAEVKDGVLYITIPKASTTG---KILDIN 237
++KA +++G+L +T+PK K +DI+
Sbjct: 87 QMKAAMENGILTVTVPKKEIKNHEVKTIDIS 117
>IMGA|Medtr4g121620.1 HSP20-like chaperone
chr04_pseudomolecule_IMGAG_V3 28590602-28592396 E
EGN_Mt090430 20090702
Length = 123
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 153 DMPGMTKEDVKAEKVPEKN-NVNGAQNGIEEEEEGGWS--AKSYGKYSCRIALPENIQFE 209
D PGM KE+ K E ++ ++G ++ +E++ W +S GK+ R+ LPEN + +
Sbjct: 27 DFPGMKKEEAKVEIEDDRVLQISGKRSVEKEDKNDQWHPVERSSGKFMRRLRLPENAKMD 86
Query: 210 KIKAEVKDGVLYITIPKASTTG---KILDIN 237
++KA +++G+L +T+PK K +DI+
Sbjct: 87 QMKAAMENGILTVTVPKKEIKNHEVKTIDIS 117