Jatropha Genome Database

JcCA0257131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0257131.10 + phase: 2 /pseudo/partial
         (315 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g014150.1 Phosphoglucomutase/phosphomannomutase alpha...   400   e-112

>IMGA|Medtr5g014150.1 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain I chr05_pseudomolecule_IMGAG_V3
           4477559-4471917 E EGN_Mt090430 20090702
          Length = 555

 Score =  400 bits (1027), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/282 (69%), Positives = 224/282 (79%), Gaps = 2/282 (0%)

Query: 29  DKFFRCASLDGDADRLVYFSVPSSDSSTIDLVDGDKILSLFAVFIKEQLAVLNTEGEEKI 88
           D   RCASLDGDADRLVYFSVP   ++ IDLVDGDKILSLFAVFI+EQL++LN +  E I
Sbjct: 276 DAGTRCASLDGDADRLVYFSVPPESNAQIDLVDGDKILSLFAVFIREQLSLLNEK--EDI 333

Query: 89  SDDYQARVGVIQTAYANGASTYYLKQLGLEVVFTPTGVKYLHEKAAQYDIGIYFEANGHG 148
            +  +AR+G++QTAYANGAST YLK L LEV  TPTGVKYLHEKAA++DIGIYFEANGHG
Sbjct: 334 KNCGKARLGIVQTAYANGASTNYLKNLDLEVNLTPTGVKYLHEKAAEFDIGIYFEANGHG 393

Query: 149 TILFSESFLSWLEERCNELSSKNKDSEQHKAALRLLAVSRLINQAVGDALSGLLLVEAIL 208
           TILFSESF+ WLE R N LSS +K SE  KAALRLLAVS+LINQAVGDALSG+LLVE IL
Sbjct: 394 TILFSESFIEWLEVRSNMLSSGSKGSEAEKAALRLLAVSKLINQAVGDALSGVLLVEVIL 453

Query: 209 RHMGWSIHKWAELYQDLPSRQIKXXXXXXXXXXXXXXXXXXXKPLGIQDAINAQVAKYSH 268
           +HMGWSIH+W ELY DLPSRQ+K                    P G+Q+AINA+ AKY+ 
Sbjct: 454 KHMGWSIHRWNELYIDLPSRQLKVKVADRTSVVTANAETVVVSPPGLQEAINAETAKYNQ 513

Query: 269 GRCFIRPSGTEDFIRVYAEASTQEEADSLAGSVTKLVDQYLG 310
           GRCF+RPSGTED +RVYAEASTQE AD+LA  V KLVDQ+LG
Sbjct: 514 GRCFVRPSGTEDVVRVYAEASTQEAADTLANGVAKLVDQFLG 555