Jatropha Genome Database

JcCA0255541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0255541.10 + phase: 0 
         (90 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g126530.1 Protein of unknown function DUF567 chr02_ps...   106   3e-24
IMGA|Medtr4g005550.1 Protein of unknown function DUF567 chr04_ps...   101   9e-23
IMGA|Medtr2g126520.1 Protein of unknown function DUF567 chr02_ps...    97   2e-21
IMGA|Medtr4g149680.1 Protein of unknown function DUF567 chr04_ps...    47   3e-06

>IMGA|Medtr2g126530.1 Protein of unknown function DUF567
          chr02_pseudomolecule_IMGAG_V3 30655764-30654204 E
          EGN_Mt090430 20090702
          Length = 224

 Score =  106 bits (264), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 60/75 (80%)

Query: 1  MKGGLVVDSGFIYQDEKLLTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVV 60
          MK  LVV  G+I+++E   TVLKT+LFFA DGFTVYDC G++ FRVDSYGPD+RD  E++
Sbjct: 14 MKEELVVQEGYIFKEEIHYTVLKTTLFFAGDGFTVYDCNGQVAFRVDSYGPDSRDLHELI 73

Query: 61 LMDAHGRCLLTVRKK 75
          LMD  GRCLLTV +K
Sbjct: 74 LMDPQGRCLLTVHRK 88


>IMGA|Medtr4g005550.1 Protein of unknown function DUF567
          chr04_pseudomolecule_IMGAG_V3 300252-297952 F
          EGN_Mt090430 20090702
          Length = 211

 Score =  101 bits (252), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 58/71 (81%)

Query: 5  LVVDSGFIYQDEKLLTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDA 64
          LV+   ++Y++E  LTVLKTS FF+ DGF VYDCKG+LVFR DSYGP+TRD  E+VLM+ 
Sbjct: 6  LVIQDEYVYKEETNLTVLKTSRFFSGDGFVVYDCKGQLVFRFDSYGPNTRDKEELVLMNT 65

Query: 65 HGRCLLTVRKK 75
          HGR LLT+R+K
Sbjct: 66 HGRSLLTLRRK 76


>IMGA|Medtr2g126520.1 Protein of unknown function DUF567
          chr02_pseudomolecule_IMGAG_V3 30645816-30643523 E
          EGN_Mt090430 20090702
          Length = 223

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 57/71 (80%)

Query: 5  LVVDSGFIYQDEKLLTVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDA 64
          L  +  +++++E   TVLKTSLFF+ DGFTVYD  G+LVFRVDSYGPD+RD  E+VLMD 
Sbjct: 17 LQEEGNYVFKEEIHYTVLKTSLFFSGDGFTVYDSHGQLVFRVDSYGPDSRDLDELVLMDP 76

Query: 65 HGRCLLTVRKK 75
           GRCLLTVR+K
Sbjct: 77 DGRCLLTVRRK 87


>IMGA|Medtr4g149680.1 Protein of unknown function DUF567
          chr04_pseudomolecule_IMGAG_V3 37250027-37252691 E
          EGN_Mt090430 20090702
          Length = 221

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)

Query: 20 TVLKTSLFFANDGFTVYDCKGELVFRVDSYGPDTRDTGEVVLMDAHGRCLLTVRKKVI 77
          TV   SL   ++G TVYD  G +V+RVD+Y  D +   EV LMD  G  L T++K ++
Sbjct: 27 TVWMKSLVLHSNGCTVYDSNGNIVYRVDNY--DKKGRREVNLMDLQGNLLCTIKKTLL 82