Jatropha Genome Database

JcCA0254771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0254771.10 + phase: 0 
         (103 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g156410.1 Gibberellin regulated protein chr03_pseudom...   109   3e-25
IMGA|Medtr1g031160.1 Gibberellin regulated protein chr01_pseudom...   107   1e-24
IMGA|Medtr1g031010.1 Appr-1-p processing; Gibberellin regulated ...   106   3e-24
IMGA|Medtr8g125220.1 Gonadotropin, beta chain; Gibberellin regul...    95   8e-21
IMGA|Medtr8g089980.1 Gibberellin regulated protein chr08_pseudom...    94   2e-20
IMGA|Medtr8g073960.1 Gibberellin regulated protein chr08_pseudom...    82   6e-17
IMGA|Medtr1g031190.1 Gibberellin regulated protein chr01_pseudom...    76   5e-15
IMGA|Medtr3g156350.1 BRCT; Gibberellin regulated protein chr03_p...    63   4e-11
IMGA|Medtr5g037930.1 Gibberellin regulated protein chr05_pseudom...    61   1e-10
IMGA|Medtr5g085950.1 Gibberellin regulated protein chr05_pseudom...    59   6e-10
IMGA|AC232874_8.1 Gibberellin regulated protein AC232874.1 30298...    59   6e-10
IMGA|AC235748_24.1 Gibberellin regulated protein AC235748.1 8559...    59   6e-10
IMGA|Medtr5g037790.1 Gibberellin regulated protein chr05_pseudom...    57   2e-09
IMGA|Medtr7g107650.1 Gibberellin regulated protein chr07_pseudom...    57   3e-09
IMGA|Medtr5g103600.1 Gibberellin regulated protein chr05_pseudom...    56   5e-09
IMGA|Medtr3g009220.1 Gibberellin regulated protein chr03_pseudom...    55   8e-09
IMGA|Medtr5g037920.1 Gibberellin regulated protein chr05_pseudom...    54   2e-08
IMGA|Medtr5g037720.1 Gibberellin regulated protein chr05_pseudom...    54   3e-08
IMGA|Medtr6g012880.1 Gibberellin regulated protein chr06_pseudom...    52   8e-08
IMGA|Medtr6g009120.1 Gibberellin regulated protein chr06_pseudom...    52   8e-08
IMGA|Medtr6g008910.1 Gibberellin regulated protein chr06_pseudom...    52   8e-08
IMGA|Medtr7g009880.1 Gibberellin regulated protein chr07_pseudom...    51   2e-07
IMGA|Medtr6g008660.1 Gibberellin regulated protein chr06_pseudom...    46   5e-06

>IMGA|Medtr3g156410.1 Gibberellin regulated protein
           chr03_pseudomolecule_IMGAG_V3 41000504-40999174 E
           EGN_Mt090430 20090702
          Length = 103

 Score =  109 bits (273), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 1/85 (1%)

Query: 20  HFAEA-DHQTVKSKLDATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPP 78
           H   A DH   +   +   S  ++IDC  AC ARC+LSSRP+LC RACGTCC+RC CVPP
Sbjct: 19  HLVHALDHPEPQVHAETQVSLQQQIDCNGACAARCRLSSRPHLCHRACGTCCSRCNCVPP 78

Query: 79  GTAGNYEACPCYASLTTHGGRRKCP 103
           GT+GN E CPCYA+ TTHGGRRKCP
Sbjct: 79  GTSGNQEMCPCYANQTTHGGRRKCP 103


>IMGA|Medtr1g031160.1 Gibberellin regulated protein
           chr01_pseudomolecule_IMGAG_V3 7496899-7494887 E
           EGN_Mt090430 20090702
          Length = 101

 Score =  107 bits (268), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 65/103 (63%), Gaps = 2/103 (1%)

Query: 1   MAFSKXXXXXXXXXXXXXXHFAEADHQTVKSKLDATNSPAEEIDCGSACTARCQLSSRPN 60
           MA SK              H  +A  Q+  ++     S  ++IDC  AC ARC+LSSRPN
Sbjct: 1   MAISKLLVASLLASFLLFHHLVDATDQSAYAQ--TQGSLLQQIDCDGACVARCRLSSRPN 58

Query: 61  LCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           LC+RACGTCC RC CVPPGT+GN E CPCYAS TT GG+ KCP
Sbjct: 59  LCQRACGTCCRRCNCVPPGTSGNKEKCPCYASQTTRGGKPKCP 101


>IMGA|Medtr1g031010.1 Appr-1-p processing; Gibberellin regulated
           protein chr01_pseudomolecule_IMGAG_V3 7426980-7432632 E
           EGN_Mt090430 20090702
          Length = 769

 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/66 (72%), Positives = 54/66 (81%)

Query: 38  SPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHG 97
           S  ++IDC  AC ARC+LSSRPNLC+RACGTCC RC CVPPGT+GN E CPCYAS TT G
Sbjct: 704 SLLQQIDCDGACVARCRLSSRPNLCQRACGTCCRRCNCVPPGTSGNKEKCPCYASQTTRG 763

Query: 98  GRRKCP 103
           G+ KCP
Sbjct: 764 GKPKCP 769


>IMGA|Medtr8g125220.1 Gonadotropin, beta chain; Gibberellin
           regulated protein chr08_pseudomolecule_IMGAG_V3
           29135332-29136296 F EGN_Mt090430 20090702
          Length = 115

 Score = 95.1 bits (235), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 34  DATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEAC-PCYAS 92
           D      ++IDCG  C +RC + SRPNLCKRACGTCC RCKCVPPGTAGN E C  CY  
Sbjct: 45  DGNRRLMQDIDCGGLCRSRCSVHSRPNLCKRACGTCCVRCKCVPPGTAGNREFCGACYTD 104

Query: 93  LTTHGGRRKCP 103
           +TTHG + KCP
Sbjct: 105 MTTHGNKTKCP 115


>IMGA|Medtr8g089980.1 Gibberellin regulated protein
           chr08_pseudomolecule_IMGAG_V3 19517909-19520592 E
           EGN_Mt090430 20090702
          Length = 61

 Score = 94.0 bits (232), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 50/61 (81%)

Query: 43  IDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKC 102
           +DCG AC  RC LSSRPNLCKRACG+CCA CKCVPPGTAGN+++C CYA LTT    RKC
Sbjct: 1   MDCGDACKGRCLLSSRPNLCKRACGSCCAVCKCVPPGTAGNFDSCECYAKLTTRNQVRKC 60

Query: 103 P 103
           P
Sbjct: 61  P 61


>IMGA|Medtr8g073960.1 Gibberellin regulated protein
           chr08_pseudomolecule_IMGAG_V3 14601570-14600427 F
           EGN_Mt090430 20090702
          Length = 112

 Score = 82.0 bits (201), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 44/62 (70%), Gaps = 1/62 (1%)

Query: 43  IDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEAC-PCYASLTTHGGRRK 101
           +DCG+ C  RC + SRPN+C RACGTCC RCKCVPPGT GN E C  CY  + T G + K
Sbjct: 51  VDCGTRCNVRCSVHSRPNVCMRACGTCCLRCKCVPPGTYGNREMCGRCYTDMITRGNKPK 110

Query: 102 CP 103
           CP
Sbjct: 111 CP 112


>IMGA|Medtr1g031190.1 Gibberellin regulated protein
          chr01_pseudomolecule_IMGAG_V3 7504309-7502782 E
          EGN_Mt090430 20090702
          Length = 147

 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 43/62 (69%), Gaps = 9/62 (14%)

Query: 33 LDATNSPAE---------EIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGN 83
          +DAT+  A+         +IDC  AC ARC+LSSRP LC RACGTCC RC CVPPGTAGN
Sbjct: 21 VDATDQSAQAYSQGSLLRKIDCNGACVARCRLSSRPKLCHRACGTCCRRCNCVPPGTAGN 80

Query: 84 YE 85
           E
Sbjct: 81 QE 82


>IMGA|Medtr3g156350.1 BRCT; Gibberellin regulated protein
           chr03_pseudomolecule_IMGAG_V3 40988501-40986337 E
           EGN_Mt090430 20090702
          Length = 461

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 32/45 (71%)

Query: 45  CGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPC 89
           C  AC ARC LSSR  L  RACGTCC+RC CVP GT+GN E CP 
Sbjct: 416 CNGACAARCCLSSRQRLGHRACGTCCSRCNCVPLGTSGNQEMCPL 460


>IMGA|Medtr5g037930.1 Gibberellin regulated protein
           chr05_pseudomolecule_IMGAG_V3 15981194-15981772 E
           EGN_Mt090430 20090702
          Length = 92

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 27  QTVKSKLDATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEA 86
           Q V +  + +  P E   C +AC  RC  +     C   C  CCA+C CVP GT G+ E 
Sbjct: 19  QDVYAGGEGSLKPEE---CSAACDVRCSATMYKKACLTYCNYCCAKCLCVPSGTYGHKEE 75

Query: 87  CPCYASLTTHGGRRKCP 103
           CPCYA+L TH G  KCP
Sbjct: 76  CPCYANLKTHEGGPKCP 92


>IMGA|Medtr5g085950.1 Gibberellin regulated protein
           chr05_pseudomolecule_IMGAG_V3 32924808-32923449 F
           EGN_Mt090430 20090702
          Length = 96

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 33/60 (55%)

Query: 44  DCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           DC   CT RC  +S    C   C  CCA C CVPPG  GN + CPCY S  T  G+ KCP
Sbjct: 37  DCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPPGVYGNKQVCPCYNSWKTQEGKPKCP 96


>IMGA|AC232874_8.1 Gibberellin regulated protein AC232874.1
           30298-31672 F EGN_Mt090430 20090702
          Length = 85

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 34/59 (57%)

Query: 45  CGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           C S C  RC  +S  + C + CG CC +C CVP GT GN + CPCY  +    G+ KCP
Sbjct: 27  CNSKCAVRCSKASIQDRCLKFCGICCEKCNCVPSGTYGNKDECPCYRDMKNSKGKGKCP 85


>IMGA|AC235748_24.1 Gibberellin regulated protein AC235748.1
           85592-86968 F EGN_Mt090430 20090702
          Length = 85

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 34/59 (57%)

Query: 45  CGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           C S C  RC  +S  + C + CG CC +C CVP GT GN + CPCY  +    G+ KCP
Sbjct: 27  CNSKCAVRCSKASIQDRCLKFCGICCEKCNCVPSGTYGNKDECPCYRDMKNSKGKGKCP 85


>IMGA|Medtr5g037790.1 Gibberellin regulated protein
           chr05_pseudomolecule_IMGAG_V3 15927973-15928566 E
           EGN_Mt090430 20090702
          Length = 92

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 34/60 (56%)

Query: 44  DCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           DC  AC  RC  +     C   C  CCA+C CVP GT G+ E CPCYA++ T  G  KCP
Sbjct: 33  DCAGACDVRCSATMYKKACLTYCNYCCAKCLCVPSGTYGHKEECPCYANMRTKRGGPKCP 92


>IMGA|Medtr7g107650.1 Gibberellin regulated protein
           chr07_pseudomolecule_IMGAG_V3 25204680-25203275 E
           EGN_Mt090430 20090702
          Length = 120

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 33/60 (55%)

Query: 44  DCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           +CG  CT RC  +     C   C  CCA+C CVPPG  GN + CPCY +  T  G  KCP
Sbjct: 61  ECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKRGGPKCP 120


>IMGA|Medtr5g103600.1 Gibberellin regulated protein
           chr05_pseudomolecule_IMGAG_V3 41510036-41508707 H
           EGN_Mt090430 20090702
          Length = 157

 Score = 55.8 bits (133), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 31/60 (51%)

Query: 44  DCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           +C   C  RC  +     C   C  CCA+C CVPPGT GN E CPCY    T  G  KCP
Sbjct: 98  ECAPRCEDRCSKTHHKKPCLFYCKYCCAKCLCVPPGTYGNKEVCPCYNDWKTKEGGPKCP 157


>IMGA|Medtr3g009220.1 Gibberellin regulated protein
           chr03_pseudomolecule_IMGAG_V3 1295656-1294275 H
           EGN_Mt090430 20090702
          Length = 162

 Score = 55.1 bits (131), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 31/60 (51%)

Query: 44  DCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           +C   C  RC  +     C   C  CCA+C CVPPGT GN E CPCY    T  G  KCP
Sbjct: 103 ECAPRCEDRCSKTHHRKPCLFYCKYCCAKCLCVPPGTYGNKEVCPCYNDWKTKEGGPKCP 162


>IMGA|Medtr5g037920.1 Gibberellin regulated protein
           chr05_pseudomolecule_IMGAG_V3 15976237-15976782 E
           EGN_Mt090430 20090702
          Length = 92

 Score = 53.5 bits (127), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 27  QTVKSKLDATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEA 86
           Q V +  + +  PAE   C   C  RC  ++    C   C  CCA+C CVP GT GN E 
Sbjct: 19  QDVYAGGEGSLKPAE---CAPKCDYRCSKTAYKKACLTYCNLCCAKCLCVPSGTYGNKEE 75

Query: 87  CPCYASLTTHGGRRKCP 103
           CPCY +     G  KCP
Sbjct: 76  CPCYNNWKNKKGGPKCP 92


>IMGA|Medtr5g037720.1 Gibberellin regulated protein
           chr05_pseudomolecule_IMGAG_V3 15889069-15887240 E
           EGN_Mt090430 20090702
          Length = 92

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 31/60 (51%)

Query: 44  DCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           DC   C  RC  +S    C   C  CCA+C CVP GT GN + CPCY +     G  KCP
Sbjct: 33  DCAPKCDYRCSKTSHRKACLTYCNLCCAKCLCVPSGTYGNKQECPCYDNWRNKNGGPKCP 92


>IMGA|Medtr6g012880.1 Gibberellin regulated protein
           chr06_pseudomolecule_IMGAG_V3 2538066-2541388 F
           EGN_Mt090430 20090702
          Length = 107

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 32/63 (50%)

Query: 41  EEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRR 100
           +   C S C+ RC+ +     C   C  CC +C CVPPG  GN   CPCY +  T  G  
Sbjct: 45  KSYQCPSQCSRRCKNTQYHKPCMFFCQKCCNKCLCVPPGYYGNKAVCPCYNNWKTQQGGP 104

Query: 101 KCP 103
           KCP
Sbjct: 105 KCP 107


>IMGA|Medtr6g009120.1 Gibberellin regulated protein
           chr06_pseudomolecule_IMGAG_V3 1412509-1411394 E
           EGN_Mt090430 20090702
          Length = 81

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 52  RCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEAC-PCYASLTTHGGRRKCP 103
           RC+L SR  LC RAC  C  RCKCVP  T  + E C  CY  + THG R KCP
Sbjct: 29  RCKLHSRNKLCIRACMACRDRCKCVPLRTYCSKEKCGKCYTDMLTHGNRPKCP 81


>IMGA|Medtr6g008910.1 Gibberellin regulated protein
           chr06_pseudomolecule_IMGAG_V3 1308023-1306910 E
           EGN_Mt090430 20090702
          Length = 81

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 52  RCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEAC-PCYASLTTHGGRRKCP 103
           RC+L SR  LC RAC  C  RCKCVP  T  + E C  CY  + THG R KCP
Sbjct: 29  RCKLHSRNKLCIRACMACRDRCKCVPLRTYCSKEKCGKCYTDMLTHGNRPKCP 81


>IMGA|Medtr7g009880.1 Gibberellin regulated protein
           chr07_pseudomolecule_IMGAG_V3 1964792-1966448 F
           EGN_Mt090430 20090702
          Length = 109

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 31/63 (49%)

Query: 41  EEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRR 100
           +   C S C+ RC  +     C   C  CC +C CVPPG  GN   CPCY +  T  G  
Sbjct: 47  KSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTQQGGP 106

Query: 101 KCP 103
           KCP
Sbjct: 107 KCP 109


>IMGA|Medtr6g008660.1 Gibberellin regulated protein
           chr06_pseudomolecule_IMGAG_V3 1207742-1209420 E
           EGN_Mt090430 20090702
          Length = 145

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 44  DCGSACTARCQLSSRPNLCKRACGTCCARCKCVP-PGTAGNYEAC-PCYASLTTHGGRRK 101
           DC   C  RC+L  R  +C  AC TCC RCKCVP   T GN E C  CY  + T      
Sbjct: 84  DCIPLCGYRCKLHLRKMVCITACMTCCDRCKCVPLDQTYGNREKCGKCYTDMRTFLDEIM 143

Query: 102 CP 103
           CP
Sbjct: 144 CP 145