Jatropha Genome Database
- JcCA0254251.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0254251.10 + phase: 0
(197 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32... 345 7e-96
IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 21... 332 5e-92
IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3 87... 330 4e-91
IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3 19... 329 5e-91
IMGA|Medtr6g099230.1 Ras small GTPase, Rab type chr06_pseudomole... 308 9e-85
IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32... 128 2e-30
IMGA|Medtr1g081200.1 Sigma-54 factor, interaction region; Ras sm... 97 5e-21
IMGA|Medtr7g118430.1 Ras GTPase; Sigma-54 factor, interaction re... 97 7e-21
IMGA|Medtr2g033230.1 Sigma-54 factor, interaction region; Ras sm... 96 2e-20
IMGA|Medtr6g022720.1 Sigma-54 factor, interaction region; Ras sm... 93 7e-20
IMGA|Medtr4g078950.1 Sigma-54 factor, interaction region; Ras sm... 92 2e-19
IMGA|Medtr3g143270.1 Ras GTPase; Sigma-54 factor, interaction re... 89 1e-18
IMGA|Medtr5g014080.1 Ras small GTPase, Rab type; chr05_pseudomol... 89 1e-18
IMGA|Medtr2g097820.1 Sigma-54 factor, interaction region; Ras sm... 87 6e-18
IMGA|Medtr1g081200.3 Sigma-54 factor, interaction region; Ras sm... 86 1e-17
IMGA|Medtr8g034870.1 Sigma-54 factor, interaction region; Ras sm... 85 2e-17
IMGA|Medtr7g093170.1 Ras GTPase; Sigma-54 factor, interaction re... 84 3e-17
IMGA|Medtr2g005330.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 18... 84 4e-17
IMGA|Medtr2g114540.1 Sigma-54 factor, interaction region; Ras sm... 84 6e-17
IMGA|Medtr4g158780.1 Ras small GTPase, Rab type; chr04_pseudomol... 83 1e-16
IMGA|Medtr4g142850.1 Sigma-54 factor, interaction region; Ras sm... 82 1e-16
IMGA|Medtr4g109180.1 Sigma-54 factor, interaction region; Ras sm... 82 2e-16
IMGA|Medtr4g141030.1 Sigma-54 factor, interaction region; Ras sm... 81 3e-16
IMGA|Medtr2g091780.1 Sigma-54 factor, interaction region; Ras sm... 81 4e-16
IMGA|Medtr2g018470.1 Sigma-54 factor, interaction region; Ras sm... 80 5e-16
IMGA|Medtr3g092520.1 Sigma-54 factor, interaction region; Ras sm... 80 5e-16
IMGA|Medtr2g123110.1 Ras small GTPase, Rab type; chr02_pseudomol... 80 6e-16
IMGA|Medtr2g005340.1 Sigma-54 factor, interaction region; Ras sm... 79 1e-15
IMGA|Medtr3g073500.1 Sigma-54 factor, interaction region; Ras sm... 79 1e-15
IMGA|Medtr3g086620.1 Ras small GTPase, Rab type; chr03_pseudomol... 79 2e-15
IMGA|Medtr7g046180.1 Ras-related protein ARA-1, putative chr07_p... 78 3e-15
IMGA|Medtr2g122890.1 Sigma-54 factor, interaction region; Ras sm... 78 3e-15
IMGA|Medtr5g084520.1 Ras small GTPase, Rab type; chr05_pseudomol... 77 4e-15
IMGA|Medtr3g101960.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3 2... 77 5e-15
IMGA|Medtr4g095400.1 Sigma-54 factor, interaction region; Ras sm... 76 1e-14
IMGA|Medtr4g009230.1 Sigma-54 factor, interaction region; Ras sm... 76 1e-14
IMGA|Medtr2g132390.1 Sigma-54 factor, interaction region; Ras sm... 73 8e-14
IMGA|Medtr1g081210.1 Ras small GTPase, Rab type chr01_pseudomole... 71 3e-13
IMGA|Medtr1g081200.2 Ras small GTPase, Rab type chr01_pseudomole... 71 3e-13
IMGA|Medtr8g029570.1 Ras small GTPase, Rab type; chr08_pseudomol... 70 7e-13
IMGA|Medtr8g034810.1 Ras small GTPase, Rab type chr08_pseudomole... 69 1e-12
IMGA|Medtr1g099480.1 Calcium-binding EF-hand; chr01_pseudomolecu... 64 3e-11
IMGA|Medtr3g136520.2 Ras small GTPase, Rab type chr03_pseudomole... 62 1e-10
IMGA|Medtr1g086440.1 Calcium-binding EF-hand; Ras small GTPase, ... 62 2e-10
IMGA|Medtr3g136520.1 Ras small GTPase, Rab type chr03_pseudomole... 62 2e-10
IMGA|Medtr3g136510.1 Ras small GTPase, Rab type chr03_pseudomole... 62 2e-10
IMGA|Medtr3g136510.2 Ras small GTPase, Rab type chr03_pseudomole... 62 2e-10
IMGA|Medtr3g136500.1 Ras small GTPase, Rab type chr03_pseudomole... 62 2e-10
IMGA|Medtr4g142850.2 Sigma-54 factor, interaction region; Ras sm... 58 4e-09
IMGA|Medtr5g099390.1 Ras small GTPase, Rab type chr05_pseudomole... 52 3e-07
IMGA|Medtr7g145740.1 Ras small GTPase, Rab type; chr07_pseudomol... 50 6e-07
IMGA|Medtr3g101760.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3 2... 50 6e-07
IMGA|Medtr3g136500.2 Ras small GTPase, Rab type chr03_pseudomole... 49 1e-06
>IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
32003647-32002013 E EGN_Mt090430 20090702
Length = 196
Score = 345 bits (885), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 167/197 (84%), Positives = 175/197 (88%), Gaps = 1/197 (0%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVVVDGSIVNLGLWD 60
MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP DYVPTVFDNFSANVVVDGS VNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSL+S+ASYEN KKWIPEL+HYAPTVPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKL 120
Query: 121 DLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVLXX 180
DLRED+QYLIDHPGAT ITTAQGEELK+ IGA Y+ECSSKTQQNVKAVFD+AIKVVL
Sbjct: 121 DLREDRQYLIDHPGATAITTAQGEELKRAIGAAVYLECSSKTQQNVKAVFDAAIKVVL-Q 179
Query: 181 XXXXXXXXXXERTCTFL 197
R+C FL
Sbjct: 180 PPKQKKKRKKNRSCIFL 196
>IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3
21246015-21242846 F EGN_Mt090430 20090702
Length = 197
Score = 332 bits (852), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 157/197 (79%), Positives = 171/197 (86%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVVVDGSIVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFP DYVPTVFDNFSANVVVDGS +NLGLWD
Sbjct: 1 MSGSRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYEN KKWIPEL+HYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKL 120
Query: 121 DLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVLXX 180
DLR+D Q+ DHPGA PITTAQGEEL+K+IGA YIECSSKTQ+NVKAVFDSAIKVVL
Sbjct: 121 DLRDDSQFFQDHPGAAPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDSAIKVVLQP 180
Query: 181 XXXXXXXXXXERTCTFL 197
++ C+ L
Sbjct: 181 PKQKKTKRKGQKACSIL 197
>IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3
8775550-8778414 E EGN_Mt090430 20090702
Length = 197
Score = 330 bits (845), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 156/197 (79%), Positives = 173/197 (87%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVVVDGSIVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFP DYVPTVFDNFSANVVV+GSIVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYEN KKWIPELKHYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVLXX 180
DLR+DKQ+ IDHPGA PITTAQGEEL+K+I A YIECSSK+Q+NVKAVFD+AI+VVL
Sbjct: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKSQENVKAVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXERTCTFL 197
++ C+ L
Sbjct: 181 PKQKKKKNKAQKACSIL 197
>IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3
19209541-19213679 F EGN_Mt090430 20090702
Length = 197
Score = 329 bits (844), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 155/197 (78%), Positives = 172/197 (87%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVVVDGSIVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFP DYVPTVFDNFSANVVV+GS VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYEN KKWIPELKHYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVLXX 180
DLR+DKQ+ +DHPGA PITTAQGEEL+K+I A YIECSSK+QQNVKAVFD+AI+VVL
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXERTCTFL 197
++ C+ L
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>IMGA|Medtr6g099230.1 Ras small GTPase, Rab type
chr06_pseudomolecule_IMGAG_V3 21851607-21855202 F
EGN_Mt090430 20090702
Length = 209
Score = 308 bits (790), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 159/178 (89%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVVVDGSIVNLGLWD 60
MS ++FIKCVTVGDGAVGKTCMLI YTSN FP DY+PTVFDNFSANV VDGSIVNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKL 120
TAGQEDY+RLRPLSYRGAD+F+LAFSL+S+ASYEN KKW+PEL+ +AP VPIVLVGTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
Query: 121 DLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVL 178
DLRED+ Y DH G IT+A+GEEL+K IGA YIECSSKTQQNVKAVFD+AIKVVL
Sbjct: 121 DLREDRGYFADHTGYNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 178
>IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3
32003647-32002723 E EGN_Mt090430 20090702
Length = 67
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/65 (93%), Positives = 61/65 (93%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVVVDGSIVNLGLWD 60
MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP DYVPTVFDNFSANVVVDGS VNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQE 65
TAG
Sbjct: 61 TAGNH 65
>IMGA|Medtr1g081200.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr01_pseudomolecule_IMGAG_V3
16060257-16053471 E EGN_Mt090430 20090702
Length = 216
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-KHYAPTVPIVLVGTKLDLR 123
E + + YRGA LL + + ++S+ N K WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSF-NNIKNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
E K+ A P T++G+ L G + + E S+KT NV VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYG-IKFFETSAKTNMNVDEVF 170
>IMGA|Medtr7g118430.1 Ras GTPase; Sigma-54 factor, interaction
region chr07_pseudomolecule_IMGAG_V3 27950642-27953739 F
EGN_Mt090430 20090702
Length = 216
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-KHYAPTVPIVLVGTKLDLR 123
E + + YRGA LL + + ++S+ N + WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSF-NNIRNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
E K+ A P T++G+ L G + + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYG-IKFFETSAKTNLNVEEVF 170
>IMGA|Medtr2g033230.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
9016235-9019888 F EGN_Mt090430 20090702
Length = 211
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLW 59
MS A K + +GD VGK+C+L+ +T F P + T+ F A ++ +D + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYA-PTVPIVLVGT 118
DTAGQE + + YRGA LL + + + ++ N W+ + + +A + I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETF-NHLASWLEDARQHANANMTIMLIGN 119
Query: 119 KLDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
K DL + ++T +GE+ K G + ++E S+KT QNV+ F
Sbjct: 120 KCDLAHRR----------AVSTEEGEQFAKENGLI-FMEASAKTAQNVEEAF 160
>IMGA|Medtr6g022720.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr06_pseudomolecule_IMGAG_V3
5114319-5120121 E EGN_Mt090430 20090702
Length = 211
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLW 59
MS K + +GD VGK+C+L+ +T F P + T+ F A ++ +D + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYA-PTVPIVLVGT 118
DTAGQE + + YRGA LL + + + ++ N W+ + + +A P + I L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETF-NHLASWLEDARQHANPNMTITLIGN 119
Query: 119 KLDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
K DL + ++ +GE+ K G + ++E S+KT QNV+ F
Sbjct: 120 KCDLSHRR----------AVSKEEGEQFAKENG-LLFMEASAKTAQNVEEAF 160
>IMGA|Medtr4g078950.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
15573426-15577863 E EGN_Mt090430 20090702
Length = 216
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 15/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRL--RPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-KHYAPTVPIVLVGTKLD 121
E ++ + YRGA LL + + +AS+ N + WI + +H + V +LVG K D
Sbjct: 75 ERFSFVINNFTYYRGAMGILLVYDVTDEASF-NNIRNWIRNIEQHASDNVNKILVGNKAD 133
Query: 122 LREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
+ E K+ A P T++G+ L G + + E S+KT NV+ VF
Sbjct: 134 MDESKR-------AVP--TSKGQALADEYG-IKFFETSAKTNLNVEEVF 172
>IMGA|Medtr3g143270.1 Ras GTPase; Sigma-54 factor, interaction
region; chr03_pseudomolecule_IMGAG_V3 36921743-36915347
E EGN_Mt090430 20090702
Length = 207
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 15/175 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSAN-VVVDGSIVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS++F + PT+ +F +DG + L +WDTAGQE
Sbjct: 13 FKLLMIGDSGVGKSSLLLCFTSDSFE-NLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQE 71
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIV--LVGTKLDLR 123
+ L YRGA ++A+ + + ++ N + W E+ Y+ + LVG K+D
Sbjct: 72 RFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVDKE 131
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVL 178
D+ +T +G + + G + +IECS+KT+ NV+ F+ + +L
Sbjct: 132 SDR----------VVTKKEGIDFAREYGCL-FIECSAKTRVNVQHCFEELVLKIL 175
>IMGA|Medtr5g014080.1 Ras small GTPase, Rab type;
chr05_pseudomolecule_IMGAG_V3 4443349-4447486 E
EGN_Mt090430 20090702
Length = 223
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPPDYVPTV-FDNFSANVVVDGSIVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELK-HYAPTVPIVLVGTKLDLRED 125
+ L P R + V ++ + + S+ ++ NT KWI E++ V IVLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQTFLNT-TKWIEEVRTERGSDVIIVLVGNKTDLVEK 129
Query: 126 KQYLIDHP------GATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
+ LI +P G ++ GE + + V +IE S+K N+KA+F
Sbjct: 130 RLILILNPVIEDSLGHRQVSIEDGEAKARELN-VMFIETSAKAGFNIKALF 179
>IMGA|Medtr2g097820.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
22987161-22993145 E EGN_Mt090430 20090702
Length = 218
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSA-NVVVDGSIVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VD ++ +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELK-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA LL + + +A++EN +W+ EL+ H P + ++L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENA-ARWLKELRDHTDPNIVVMLIGNKSDLR 131
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
+L+ P + A+ E L ++E S+ NV+ F
Sbjct: 132 ----HLVAVPTEDGKSFAERESL-------YFMETSALEATNVENAF 167
>IMGA|Medtr1g081200.3 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr01_pseudomolecule_IMGAG_V3
16060257-16054311 E EGN_Mt090430 20090702
Length = 171
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-KHYAPTVPIVLVGTKLDLR 123
E + + YRGA LL + + ++S+ N K WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDKQYLIDH 132
E K+ + H
Sbjct: 134 ESKRVCLTH 142
>IMGA|Medtr8g034870.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr08_pseudomolecule_IMGAG_V3
7638438-7637794 E EGN_Mt090430 20090702
Length = 215
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLW 59
MS + K + +GD VGK+C+L+ +T N F + T+ F + ++ + V L +W
Sbjct: 1 MSRSYAFKYIIIGDTGVGKSCLLLQFTDNRFQRFHDVTIGVEFGIRTININNNSVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPT-VPIVLVGT 118
DTAGQE + + YR A LL + + + ++++ W+ + + +A + + I+LVG
Sbjct: 61 DTAGQERFRSITRSYYRKAAGALLVYDITRRETFDHM-ATWLEDARQHASSDMIIMLVGN 119
Query: 119 KLDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
K DL G ++T +GE+ K G + ++E S+K+++N++ F
Sbjct: 120 KSDL----------AGNRLVSTEEGEKFAKENG-LMFMEVSAKSRENIEEAF 160
>IMGA|Medtr7g093170.1 Ras GTPase; Sigma-54 factor, interaction
region chr07_pseudomolecule_IMGAG_V3 20752031-20755936 F
EGN_Mt090430 20090702
Length = 202
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAP-TVPIVLVGTKLDLR 123
E + + YRGA ++ + + + S+ N K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKCDLT 126
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
++ D A IG + ++E S+K NV+ F
Sbjct: 127 SERAVSYDTAKA----------FADEIG-IPFMETSAKDSTNVEQAF 162
>IMGA|Medtr2g005330.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
184635-185968 F EGN_Mt090430 20090702
Length = 203
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
K + +GD +VGK+C+L+ + +++ Y+ T+ +F V ++G L +WDTAGQ
Sbjct: 9 LFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIWDTAGQ 68
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYA-PTVPIVLVGTKLDLR 123
E + + YRGA ++ + + S+ N K+W+ E+ YA +V +LVG K DL
Sbjct: 69 ERFRTITSSYYRGAHGIIIVYDVTDIESFNNV-KQWLHEIDRYANHSVSKLLVGNKCDLT 127
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
++K + H T A +EL + ++E S+K NV+ F
Sbjct: 128 DNK---LVH---THTAKAFADEL-----GIPFLETSAKDSINVEQAF 163
>IMGA|Medtr2g114540.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
27107054-27104346 E EGN_Mt090430 20090702
Length = 213
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 14/168 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTV-FDNFSANVVVDGSIVNLGLWDTAGQ 64
IK + +GD VGK+ +L+ ++ + F Y+ T+ D + + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAP--TVPIVLVGTKLDL 122
E + + YRGA LL + + ++S+ N WI ++ ++ V +LVG K+D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-TNWIRSIEQHSSDNIVNKILVGNKVDM 133
Query: 123 REDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
E K+ A P + +G+ L G + + E S+KT NV F
Sbjct: 134 DESKR-------AVPFS--KGQALANKYG-IKFFETSAKTNLNVDEAF 171
>IMGA|Medtr4g158780.1 Ras small GTPase, Rab type;
chr04_pseudomolecule_IMGAG_V3 39962115-39963689 E
EGN_Mt090430 20090702
Length = 190
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 14/163 (8%)
Query: 10 VTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQEDYN 68
V +GD GKT +++ + F T+ F V+ ++ + V +WDTAGQE Y+
Sbjct: 5 VLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYH 64
Query: 69 RLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYA-PTVPIVLVGTKLDLREDKQ 127
L P+ YRG+ ++ + + S S+ KKW+ E++ A P + ++LV K DL + ++
Sbjct: 65 SLAPMYYRGSAAAIVVYDITSMDSFVRA-KKWVREVQRQANPNLIMLLVANKADLEDQRK 123
Query: 128 YLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
+ +GEE K G +++ E S+KT QNV +F
Sbjct: 124 ----------VGNEEGEEYAKENG-MSFFETSAKTAQNVNELF 155
>IMGA|Medtr4g142850.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
35680571-35684293 E EGN_Mt090430 20090702
Length = 217
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 24/185 (12%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSAN-VVVDGSIVNLGLWDTAGQ 64
K + +GD VGK+ +L+ +TS+ F D PT+ +F V ++G + L +WDTAGQ
Sbjct: 13 MFKLLMIGDSGVGKSSLLLRFTSDDFD-DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLA---------FSLVSKASYENTYKKWIPELKHYAPTVPI-- 113
E + L YRGA ++ + + + ++ N + W E+ Y+
Sbjct: 72 ERFRTLTSSYYRGAQGIIMGNISWKQLVFYDVTRRETFTNLSEIWAKEIDLYSTNQDCMK 131
Query: 114 VLVGTKLDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSA 173
+LVG K +D G +T +G + + G + +IECS+KT+ NV+ F+
Sbjct: 132 MLVGNK----------VDKEGDRVVTKKEGIDFAREYGCL-FIECSAKTRVNVQQCFEEL 180
Query: 174 IKVVL 178
+ VL
Sbjct: 181 VLKVL 185
>IMGA|Medtr4g109180.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
24355316-24353037 E EGN_Mt090430 20090702
Length = 217
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD IV +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELK-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA LL + + ++EN ++W+ EL+ H + I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
Query: 124 E 124
Sbjct: 132 H 132
>IMGA|Medtr4g141030.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
34720246-34722755 E EGN_Mt090430 20090702
Length = 209
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNF-SANVVVDGSIVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + ++VD +V L +WDTAGQ
Sbjct: 12 LLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPT-----VPIVLVGTK 119
E ++ L YRGAD +L + + +++ T W + A T P VL+G K
Sbjct: 72 ERFHSLGAAFYRGADCCVLVYDVNIHKTFD-TLNNWHDDFLKQADTGNPDAFPFVLLGNK 130
Query: 120 LDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVV 177
+D +D + +T + E G++ Y E S+K NV F KV
Sbjct: 131 VD--------VDGGNSRRVTEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAKVA 180
>IMGA|Medtr2g091780.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
20763526-20767375 E EGN_Mt090430 20090702
Length = 217
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD ++ +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELK-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA LL + + A++EN +W+ EL+ H + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFENV-DRWLKELRNHTDSNIVVMLVGNKADLR 131
>IMGA|Medtr2g018470.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
4871209-4868238 F EGN_Mt090430 20090702
Length = 217
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSA-NVVVDGSIVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VD +V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELK-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA LL + + ++EN ++W+ EL+ H + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVVMLVGNKADLR 131
>IMGA|Medtr3g092520.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr03_pseudomolecule_IMGAG_V3
21753746-21751718 E EGN_Mt090430 20090702
Length = 216
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPT-VPIVLVGTKLDLR 123
E Y + YRGA LL + + + ++EN ++W+ EL+ +A + + I+L G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENV-QRWLRELRDHADSNIVIMLAGNKSDL- 129
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDS 172
+H A AQ K+ + +++E S+ NV+ F +
Sbjct: 130 -------NHLRAVSSDDAQNLAEKETL---SFLETSALEALNVEKAFQT 168
>IMGA|Medtr2g123110.1 Ras small GTPase, Rab type;
chr02_pseudomolecule_IMGAG_V3 29724457-29722809 E
EGN_Mt090430 20090702
Length = 200
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQED 66
K V +GD GKT + + + F + PT+ F ++ + + V +WDTAGQE
Sbjct: 12 KLVLLGDMGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSLSEATVKFDIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-KHYAPTVPIVLVGTKLDLRED 125
Y+ L P+ YRGA ++ + + S ++ KKW+ EL +H + + + LV K DL
Sbjct: 72 YHSLAPMYYRGAAAAIVVYDISSIDTFVRA-KKWVQELQRHGSQKLVMALVANKCDLEPK 130
Query: 126 KQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
++ + T GE+ + G + Y+E S+KT +N+ +F
Sbjct: 131 RE----------VETEDGEQFAQENG-MFYMETSAKTAENINELF 164
>IMGA|Medtr2g005340.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
188745-187533 F EGN_Mt090430 20090702
Length = 220
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G V +WDTAGQ
Sbjct: 15 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYA-PTVPIVLVGTKLDLR 123
E Y + YRGA LL + + +++N +W+ EL+ +A + I+L+G K DL+
Sbjct: 75 ERYRAITSAYYRGALGALLVYDVTKPTTFDNV-TRWLKELRDHADANIVIMLIGNKTDLK 133
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAI 174
H A AQ K+ +++IE S+ NV+ F + +
Sbjct: 134 --------HLRAVATEDAQSYAEKE---GLSFIETSALEATNVEKAFQTTL 173
>IMGA|Medtr3g073500.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr03_pseudomolecule_IMGAG_V3
17019246-17019911 H EGN_Mt090430 20090702
Length = 221
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 91/172 (52%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLW 59
MS + K + +GD VGK+C+++ + N F + T+ F + ++ + V L +W
Sbjct: 1 MSHSYAFKYIIIGDTGVGKSCLVLQFMDNRFQRFHNATIGVGFGFKTININNNPVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPT-VPIVLVGT 118
DTAGQE + + YR A LL + + + ++ N W+ + + +A + + I+L+G
Sbjct: 61 DTAGQERFRSITKSYYRKAACALLVYDITRRETF-NHLATWLEDARQHASSDMIIMLIGN 119
Query: 119 KLDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
K DL ++ ++T +GE+ K G + ++E S+K+++N++ F
Sbjct: 120 KSDLACNR----------VVSTEEGEKFTKENG-LMFMEVSAKSRENIEEAF 160
>IMGA|Medtr3g086620.1 Ras small GTPase, Rab type;
chr03_pseudomolecule_IMGAG_V3 20313622-20319074 E
EGN_Mt090430 20090702
Length = 200
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTF---PPDYVPTVFDNFSANVVVDGSIVNLGLWDTAGQ 64
K V +GD GK+ +++ + F + F FS + V+ + V +WDTAGQ
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-KHYAPTVPIVLVGTKLDLR 123
E Y+ L P+ YRGA ++ + + S S+ KKW+ EL K P + + L G K DL
Sbjct: 70 ERYHSLAPMYYRGAAAAIIVYDITSSDSFSRA-KKWVQELQKQGNPNMVMALAGNKSDL- 127
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
EDK+ + TA+ + + ++E S+K+ NV VF
Sbjct: 128 EDKRKV----------TAEEARVYAEENGLFFMETSAKSAANVNDVF 164
>IMGA|Medtr7g046180.1 Ras-related protein ARA-1, putative
chr07_pseudomolecule_IMGAG_V3 11284278-11288236 F
EGN_Mt090430 20090702
Length = 215
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLWDTAGQ 64
K V +GD AVGK+ +L + N F + T+ F +V +DG V +WDTAGQ
Sbjct: 13 LFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-KHYAPTVPIVLVGTKLDLR 123
E + + YRGA L+ + + + ++E + K+W+ EL TV +LVG K DL
Sbjct: 73 ERFRAVTSAYYRGAFGALVVYDISRRGTFE-SIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 124 EDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVV 177
++ I+ +G+ L + G + ++E S+ NV+ F+ I+ +
Sbjct: 132 NIREVSIE----------EGKALAEEEG-LFFMETSALDSTNVQTAFEIVIREI 174
>IMGA|Medtr2g122890.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
29644699-29641448 E EGN_Mt090430 20090702
Length = 209
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNF-SANVVVDGSIVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V V+ + L +WDTAGQ
Sbjct: 10 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQVEDRLFTLQIWDTAGQ 69
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPE-LKHYAPT----VPIVLVGTK 119
E + L YRGAD +L + + S+EN W E L +P+ P V++G K
Sbjct: 70 ERFQSLGVAFYRGADCCVLVYDVNVMKSFEN-LNHWREEFLIQASPSDPENFPFVVLGNK 128
Query: 120 LDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVL 178
+D+ ++ A ++G + Y E S+K NV+A F+ K L
Sbjct: 129 VDVDGGNSRVVSEKKAKAWCASKGN--------IPYFETSAKEGFNVEAAFECITKNAL 179
>IMGA|Medtr5g084520.1 Ras small GTPase, Rab type;
chr05_pseudomolecule_IMGAG_V3 32172903-32178330 E
EGN_Mt090430 20090702
Length = 200
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNF-SANVVVDGSIVNLGLWDTAGQED 66
K V +GD GK+ +++ + F T+ F S + V+ + V +WDTAGQE
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-KHYAPTVPIVLVGTKLDLRED 125
Y+ L P+ YRGA ++ + + + S+ KKW+ EL K P + + G K DL ED
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTRA-KKWVQELQKQGNPNMVVAFAGNKADL-ED 129
Query: 126 KQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
K+ + TA+ + + +IE S+KT NV +F
Sbjct: 130 KRKV----------TAEEARVYAEENGLFFIETSAKTAANVNDIF 164
>IMGA|Medtr3g101960.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3
24774853-24778399 E EGN_Mt090430 20090702
Length = 222
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSAN-VVVDGSIVNLGLWDTAGQED 66
K V +GD AVGK+ +L + N F D T+ F +V++ V +WDTAGQE
Sbjct: 18 KVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQER 77
Query: 67 YNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYA-PTVPIVLVGTKLDLRED 125
Y + YRGA +L + + + S+++ +W+ EL+++A + I+L+G K DL E
Sbjct: 78 YRAVTSAYYRGAVGAMLVYDITKRPSFDHI-PRWLEELRNHADKNIVIILIGNKSDLEEQ 136
Query: 126 KQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
+ A P T +E + G + ++E S+ NV+ F
Sbjct: 137 R--------AVP--TEDAKEFAEKEG-LFFLETSALQATNVETAF 170
>IMGA|Medtr4g095400.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
19838057-19834450 F EGN_Mt090430 20090702
Length = 206
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNF-SANVVVDGSIVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPE-LKHYAPT----VPIVLVGTK 119
E + L YRGAD +L + + S S++N W E L P+ P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDN-LNNWREEFLIQANPSDPENFPFVVIGNK 126
Query: 120 LDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVL 178
+D+ ++ A A+G + Y E S+K NV+ F + K L
Sbjct: 127 IDIDGGNSRVVSEKKARAWCAAKGN--------IPYFETSAKEGINVEEAFQTIAKDAL 177
>IMGA|Medtr4g009230.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
1421872-1425592 F EGN_Mt090430 20090702
Length = 207
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNF-SANVVVDGSIVNLG 57
M++ R +K + +GD VGKT ++ Y + F Y T+ +F + V + + L
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPE-LKHYAPT----VP 112
+WDTAGQE + L YRGAD +L + + S+EN W E L +P+ P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFEN-LNHWREEFLIQASPSDPENFP 119
Query: 113 IVLVGTKLDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDS 172
V++G K+D+ ++ A ++G + Y E S+K NV+A F
Sbjct: 120 FVVLGNKIDVDGGNSRVVSEKKAKAWCASKGN--------IPYFETSAKEGFNVEAAFQC 171
Query: 173 AIKVVL 178
K L
Sbjct: 172 IAKNAL 177
>IMGA|Medtr2g132390.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
31999589-31997335 F EGN_Mt090430 20090702
Length = 215
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSA-NVVVDGSIVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ +V + +V +WDTAGQ
Sbjct: 11 LFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQ 70
Query: 65 EDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELK-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA LL + ++EN ++W+ EL+ H V I+LVG K DL+
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDSTRHVTFENV-ERWLKELRDHTDAYVVIMLVGNKADLK 129
>IMGA|Medtr1g081210.1 Ras small GTPase, Rab type
chr01_pseudomolecule_IMGAG_V3 16067992-16061303 E
EGN_Mt090430 20090702
Length = 181
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 47 VVVDGSIVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-K 105
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N K WI + +
Sbjct: 22 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF-NNIKNWIRNIEQ 80
Query: 106 HYAPTVPIVLVGTKLDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQN 165
H + V +LVG K D+ E K+ A P T++G+ L G + + E S+KT N
Sbjct: 81 HASDNVNKILVGNKADMDESKR-------AVP--TSKGQALADEYG-IKFFETSAKTNMN 130
Query: 166 VKAVF 170
V+ VF
Sbjct: 131 VEEVF 135
>IMGA|Medtr1g081200.2 Ras small GTPase, Rab type
chr01_pseudomolecule_IMGAG_V3 16060257-16053471 E
EGN_Mt090430 20090702
Length = 181
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 47 VVVDGSIVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPEL-K 105
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N K WI + +
Sbjct: 22 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF-NNIKNWIRNIEQ 80
Query: 106 HYAPTVPIVLVGTKLDLREDKQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQN 165
H + V +LVG K D+ E K+ A P T++G+ L G + + E S+KT N
Sbjct: 81 HASDNVNKILVGNKADMDESKR-------AVP--TSKGQALADEYG-IKFFETSAKTNMN 130
Query: 166 VKAVF 170
V VF
Sbjct: 131 VDEVF 135
>IMGA|Medtr8g029570.1 Ras small GTPase, Rab type;
chr08_pseudomolecule_IMGAG_V3 6558177-6560109 E
EGN_Mt090430 20090702
Length = 216
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 17/116 (14%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVVVDGSIVNLGLWDTAGQEDY 67
K V +GD AVGKT +L ++ N V ++G ++ +WDTAGQE Y
Sbjct: 28 KVVVIGDSAVGKTQILSRFSKNE---------------TVTINGKVIKAQIWDTAGQERY 72
Query: 68 NRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAP-TVPIVLVGTKLDL 122
+ YRGA +L + + + S+++ KW+ EL+ +A ++ I+LVG K DL
Sbjct: 73 RAVTSAYYRGALGAMLVYDITKRQSFDHV-AKWVEELRAHADNSIVIMLVGNKGDL 127
>IMGA|Medtr8g034810.1 Ras small GTPase, Rab type
chr08_pseudomolecule_IMGAG_V3 7613157-7612519 E
EGN_Mt090430 20090702
Length = 187
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVV-VDGSIVNLGLW 59
MS + K + +GD VGK+C+L+ +T N F + T+ F + ++ + V L +W
Sbjct: 1 MSRSYAFKYIIIGDIGVGKSCLLLQFTDNRFQRFHDTTIGVEFGIRTININNNPVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIV-LVGT 118
DTAGQE ++ + YR A LL + + + ++++ W+ + + +A + I+ L+G
Sbjct: 61 DTAGQERFSSITKSYYRKAADALLVYDITRRETFDHM-ATWLEDARQHASSDTIIMLIGN 119
Query: 119 KLDLREDKQYLIDHPGATPITTAQGEELKKMIG 151
K DL ++ ++T +GE+ K G
Sbjct: 120 KSDLACNR----------VVSTEEGEKFTKENG 142
>IMGA|Medtr1g099480.1 Calcium-binding EF-hand;
chr01_pseudomolecule_IMGAG_V3 20333411-20342012 E
EGN_Mt090430 20090702
Length = 230
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSANVVVDGSIVNLGLWDTAGQ-E 65
++ V GD GK+ ++ + ++ F P+ P V + V + V + + DT+ +
Sbjct: 17 VRIVVAGDQGTGKSSLISTASTENFRPNVAP-VLPPTTLAVDLYPDRVPITIIDTSSRVA 75
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKLDLRED 125
D NR+ R AD +L ++ + EN W+P L++ VP+++VG KLDLR++
Sbjct: 76 DSNRVAEELQR-ADTVVLTYACDRPETLENLSTVWLPHLRNLEVNVPVIVVGCKLDLRDE 134
Query: 126 KQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVL 178
Q + +PI Q E++ T IECS+ V VF A K VL
Sbjct: 135 NQQVSLEQVMSPI-MQQFREIE------TCIECSASRLIQVPEVFYYAQKAVL 180
>IMGA|Medtr3g136520.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34476760-34478596 E
EGN_Mt090430 20090702
Length = 199
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTV-FDNFSANVVVDGSIVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKLDLRED 125
+ LR Y ++ F + ++ +Y+N W +L +PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>IMGA|Medtr1g086440.1 Calcium-binding EF-hand; Ras small GTPase, Rab
type; ; chr01_pseudomolecule_IMGAG_V3 17111254-17102829
E EGN_Mt090430 20090702
Length = 640
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVF-DNFSANVVVDGSIVNLGLWDTAGQE 65
++ V VGD + GKT ++ + S++FP P + + +N D V L L DT
Sbjct: 13 VRIVIVGDKSAGKTTLISAMASDSFPATVPPLLRPTHLPSNSFTDS--VPLILIDTPSSV 70
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKLDLRED 125
+ AD ++ ++ + S+E W+P+L+ P+++VG KLDLR++
Sbjct: 71 GEQGKVVEELKRADSVIVTYACDNTMSFERVSTHWLPQLQKLEVKAPVLVVGCKLDLRDE 130
Query: 126 KQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVFDSAIKVVL 178
+ + +TT + +++ VT IECS+ T V VF A K L
Sbjct: 131 SRQV----SLESLTTGIMNQFREV---VTCIECSAATLYQVPEVFYFAQKAAL 176
>IMGA|Medtr3g136520.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34476760-34479459 E
EGN_Mt090430 20090702
Length = 221
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTV-FDNFSANVVVDGSIVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKLDLRED 125
+ LR Y ++ F + ++ +Y+N W +L +PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQYLIDHPGATPITTAQGEELKKMIGAVTYIECSSKTQQNVKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>IMGA|Medtr3g136510.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34474773 E
EGN_Mt090430 20090702
Length = 221
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTV-FDNFSANVVVDGSIVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKLDLR 123
+ LR Y ++ F + ++ +Y+N W +L +PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVK 130
>IMGA|Medtr3g136510.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34471191-34474773 E
EGN_Mt090430 20090702
Length = 221
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTV-FDNFSANVVVDGSIVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKLDLR 123
+ LR Y ++ F + ++ +Y+N W +L +PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVK 130
>IMGA|Medtr3g136500.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34470742 E
EGN_Mt090430 20090702
Length = 221
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTV-FDNFSANVVVDGSIVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKLDLR 123
+ LR Y ++ F + ++ +Y+N W +L +PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVK 130
>IMGA|Medtr4g142850.2 Sigma-54 factor, interaction region; Ras
small GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
35680571-35684293 E EGN_Mt090430 20090702
Length = 93
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSAN-VVVDGSIVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS+ F D PT+ +F V ++G + L +WDTAGQE
Sbjct: 14 FKLLMIGDSGVGKSSLLLRFTSDDFD-DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQE 72
Query: 66 DYNRLRPLSYRGADVFLLA 84
+ L YRGA ++
Sbjct: 73 RFRTLTSSYYRGAQGIIMG 91
>IMGA|Medtr5g099390.1 Ras small GTPase, Rab type
chr05_pseudomolecule_IMGAG_V3 39733208-39730184 E
EGN_Mt090430 20090702
Length = 289
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNF-SANVVVDGSIVNLGLWDTAGQE 65
+K +GD +GKT LI Y N + N + V G+ ++ +WD AG +
Sbjct: 105 LKISLLGDCHIGKTTFLIKYVGNEVEKRSLQMEGLNLMDKTLYVQGARISFCIWDVAGDK 164
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHYAPTVPIVLVGTKLD 121
P++ + A L+ F L S+++ N W E + + T +L+GTK D
Sbjct: 165 KSLDQIPMACKDAVALLIMFDLTSRSTLNNVV-GWYSEARKWNQTAIPILIGTKFD 219
>IMGA|Medtr7g145740.1 Ras small GTPase, Rab type;
chr07_pseudomolecule_IMGAG_V3 34737364-34737979 F
EGN_Mt090430 20090702
Length = 98
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPPDYVPTVFDNFSAN-VVVDGSIVNLGLWDTAGQED 66
K V +GD AVGKT ML + N F D T+ F V ++G ++ +WDTAGQE
Sbjct: 22 KVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIWDTAGQER 81
Query: 67 Y 67
+
Sbjct: 82 F 82
>IMGA|Medtr3g101760.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3
24679515-24681411 E EGN_Mt090430 20090702
Length = 101
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPPDYVPTV-FDNFSANVVVDGSIVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLAFSLVS 89
+ L P R + V ++ + + +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVAT 93
>IMGA|Medtr3g136500.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34470742 E
EGN_Mt090430 20090702
Length = 116
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPPDYVPTV-FDNFSANVVVDGSIVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLVSKASYENTYKKWIPELKHY 107
+ LR Y ++ F + ++ +Y+N W +L Y
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRY 114