Jatropha Genome Database

JcCA0251901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0251901.10 + phase: 0 
         (387 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g111900.1 Fatty acid desaturase chr07_pseudomolecule_...   573   e-164
IMGA|AC233577_39.1 Fatty acid desaturase AC233577.5 182710-18086...   470   e-133
IMGA|Medtr5g079460.1 Fatty acid desaturase chr05_pseudomolecule_...   205   4e-53
IMGA|Medtr4g013060.1 Fatty acid desaturase chr04_pseudomolecule_...   199   2e-51
IMGA|Medtr8g145530.1 Fatty acid desaturase chr08_pseudomolecule_...    94   8e-20

>IMGA|Medtr7g111900.1 Fatty acid desaturase
           chr07_pseudomolecule_IMGAG_V3 26389378-26394723 E
           EGN_Mt090430 20090702
          Length = 392

 Score =  573 bits (1478), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 271/388 (69%), Positives = 313/388 (80%), Gaps = 5/388 (1%)

Query: 1   MGAGGQKTAVLVSSKFKEMETNRRLKRVPHTKPPFTLGQIKQAIPSHCFKRSLLRXXXXX 60
           MGAGG +T+V  S++  E +T   +KRVP  KPPF+L QIK+AIP HCFKRS++      
Sbjct: 9   MGAGG-RTSVPPSARKSENDT---VKRVPFEKPPFSLSQIKKAIPPHCFKRSVIHSFSYV 64

Query: 61  XXXXXXXXXXXXIAASYFHLLPSPISYIAWPIYWTLQGCTLTGVWVIAHECGHHAFSDYQ 120
                       +A  YF  LP P+S++AWP YW +QGC LTGVWVIAHECGHHAFSDYQ
Sbjct: 65  VYDLTIAFFLYYVATHYFQHLPRPLSFLAWPAYWAIQGCILTGVWVIAHECGHHAFSDYQ 124

Query: 121 WVDDTVGLILHSSLLVPYFSWKISHRRHHSNTGSIERDEVFVPKFKSRIPWYSQYL-NNP 179
           W+DDTVGLILHS+LLVPYFSWK SHRRHHSNTGS+ERDEVFVPK KS I WYS+YL NNP
Sbjct: 125 WLDDTVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSSIYWYSKYLSNNP 184

Query: 180 LGRXXXXXXXXXVGWPLYLAFNVSGRPYNRFACHFDPSGPIYSDRERLQIYISDIGIFAA 239
           LGR         +GWPLYLA NVSGRPY+RFACHF+P GPIYSDRERLQIY+SD GI A 
Sbjct: 185 LGRVLTITITLTLGWPLYLALNVSGRPYDRFACHFNPHGPIYSDRERLQIYVSDAGILAV 244

Query: 240 TYVLYQIAMAKGLAWLISIYGIPLLIVNAFLVTITYLQHTHPALPHYDSSEWDWLRGALS 299
            + LY +AMAKGLAW++ +YG+PLL+VN FLV IT+LQHTHPALPHYDSSEWDWLRGAL+
Sbjct: 245 CFGLYHLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYDSSEWDWLRGALA 304

Query: 300 TVDRDYGVLNKVFHNITDTHVTHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPILMAL 359
           TVDRDYG+LNKVFHNITDTHV HHLFSTMPHYHAMEATKAIKPILG+YY+ D TP   AL
Sbjct: 305 TVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGDYYRLDETPFYQAL 364

Query: 360 WREAKECLFVEPEEGGPNRGVLWYGNKY 387
           WREA+EC++VEP++G   +GV WY NK+
Sbjct: 365 WREARECIYVEPDQGTERKGVFWYNNKW 392


>IMGA|AC233577_39.1 Fatty acid desaturase AC233577.5 182710-180865 E
           EGN_Mt090430 20090702
          Length = 343

 Score =  470 bits (1210), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 228/363 (62%), Positives = 264/363 (72%), Gaps = 20/363 (5%)

Query: 25  LKRVPHTKPPFTLGQIKQAIPSHCFKRSLLRXXXXXXXXXXXXXXXXXIAASYFHLLPSP 84
           + +VPHTKPPFT+GQ+K++IP HCF+RS+L                  I+ +YFH  P P
Sbjct: 1   MNKVPHTKPPFTVGQLKKSIPPHCFERSIL-LSFSYVVFDLSIAYVLYISTTYFHSFPHP 59

Query: 85  ISYIAWPIYWTLQGCTLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSSLLVPYFSWKIS 144
             +I WP+YW LQ  T                      DD VG ILH+SLLVPYFSWKIS
Sbjct: 60  FPFILWPVYWLLQVTT-------------------NGFDDLVGFILHTSLLVPYFSWKIS 100

Query: 145 HRRHHSNTGSIERDEVFVPKFKSRIPWYSQYLNNPLGRXXXXXXXXXVGWPLYLAFNVSG 204
           HRRHHSNT S+ERDEVFVPK KS + WYS+YLNNPLGR         +GWPLYLAFNV G
Sbjct: 101 HRRHHSNTASLERDEVFVPKPKSNVGWYSKYLNNPLGRALTLLITLTLGWPLYLAFNVFG 160

Query: 205 RPYNRFACHFDPSGPIYSDRERLQIYISDIGIFAATYVLYQIAMAKGLAWLISIYGIPLL 264
           RPY+RFA H+ P  PIYS RERLQ+++S   + AATY+LY IA  KG  WLI +Y +PLL
Sbjct: 161 RPYDRFASHYHPYAPIYSKRERLQVFVSIAAVLAATYLLYFIASLKGFVWLICVYFVPLL 220

Query: 265 IVNAFLVTITYLQHTHPALPHYDSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVTHHL 324
           IVN FLVTITYLQHTH +LPHYDS EWDWLRGAL+TVDRDYG+L KVFH+ITDTHV HH+
Sbjct: 221 IVNGFLVTITYLQHTHFSLPHYDSKEWDWLRGALATVDRDYGILIKVFHHITDTHVAHHI 280

Query: 325 FSTMPHYHAMEATKAIKPILGEYYQFDGTPILMALWREAKECLFVEPEEGGPNRGVLWYG 384
           FSTMPHYHAMEATKA+KPILGEYYQFD TP   ALWREAKECL+VE +EG   +GV WY 
Sbjct: 281 FSTMPHYHAMEATKAMKPILGEYYQFDDTPFYKALWREAKECLYVEQDEGTSQKGVYWYK 340

Query: 385 NKY 387
           NK+
Sbjct: 341 NKF 343


>IMGA|Medtr5g079460.1 Fatty acid desaturase
           chr05_pseudomolecule_IMGAG_V3 29627982-29625700 E
           EGN_Mt090430 20090702
          Length = 391

 Score =  205 bits (521), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 177/347 (51%), Gaps = 22/347 (6%)

Query: 5   GQKTAVLVSSKFKEMETNRRLKRVPHTKPPFTLGQIKQAIPSHCFKRSLLRXXXXXXXXX 64
           GQ+T V+ +  +    +       P   PPF +  I+ AIP HC+ ++  R         
Sbjct: 18  GQETMVVTNGGYNYNHSEFD----PSAPPPFKIADIRAAIPKHCWVKNTWRSLSYVLRDV 73

Query: 65  XXXXXXXXIAASYFHLLPSPISYIAWPIYWTLQGCTLTGVWVIAHECGHHAFSDYQWVDD 124
                    A  +        ++  WPIYW LQG     ++V+ H+CGH +FSD   V++
Sbjct: 74  VVVTALIVAAIRF-------DNWYFWPIYWPLQGTMFWAIFVLGHDCGHGSFSDSSLVNN 126

Query: 125 TVGLILHSSLLVPYFSWKISHRRHHSNTGSIERDEVFVPKFKSRIPWYSQYLNNPLGRXX 184
            VG ILHSS+LVPY  W+ISH+ HH N G++ERDE +VP  +         L+N      
Sbjct: 127 FVGHILHSSILVPYHGWRISHKTHHQNHGNVERDESWVPLTEKVY----NSLDNMTKFVR 182

Query: 185 XXXXXXXVGWPLYLAFNVSGRPYNRFACHFDPSGPIYSDRERLQIYISDIGIFAATYVLY 244
                    +P+YL     G+       HF P   ++S  ER ++ +S +       +L 
Sbjct: 183 FSVPLPLFAYPIYLWSRSPGKS----GSHFHPYSDLFSPNERKEVTVSTVCWLLMFSLLL 238

Query: 245 QIAMAKGLAWLISIYGIPLLIVNAFLVTITYLQHT--HPALPHYDSSEWDWLRGALSTVD 302
            ++       ++ +YG+P  I   +L  +TYL H      LP Y   EW +LRG L+TVD
Sbjct: 239 YLSFTTSPLLILKLYGVPYWIFVMWLDFVTYLHHHGYTQKLPWYRGQEWTYLRGGLTTVD 298

Query: 303 RDYGVLNKVFHNITDTHVTHHLFSTMPHYHAMEATKAIKPILGEYYQ 349
           RDYG +N + H+I  THV HHLF  +PHYH +EATKA KPI G+YY+
Sbjct: 299 RDYGWINNIHHDI-GTHVVHHLFPQIPHYHLVEATKAAKPIFGDYYR 344


>IMGA|Medtr4g013060.1 Fatty acid desaturase
           chr04_pseudomolecule_IMGAG_V3 2464310-2468599 E
           EGN_Mt090430 20090702
          Length = 440

 Score =  199 bits (507), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 169/323 (52%), Gaps = 18/323 (5%)

Query: 29  PHTKPPFTLGQIKQAIPSHCFKRSLLRXXXXXXXXXXXXXXXXXIAASYFHLLPSPISYI 88
           P   PPFTLG I+ AIP HC+ +   +                 + A+Y +      S  
Sbjct: 86  PGAPPPFTLGDIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLA-VVAAYVN------SLF 138

Query: 89  AWPIYWTLQGCTLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSSLLVPYFSWKISHRRH 148
            WP+YW  QG     ++V+ H+CGH +FS+   ++   G +LHSS+LVPY  W+ISHR H
Sbjct: 139 VWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVAGHLLHSSILVPYHGWRISHRTH 198

Query: 149 HSNTGSIERDEVFVPKFKSRIPWYSQYLNNPLGRXXXXXXXXXVGWPLYLAFNVSGRPYN 208
           H N G +E DE + P    +I    + L+N             + +P YL     G+   
Sbjct: 199 HQNHGHVENDESWHP-LPEKI---FRSLDNSTKMLRFTIPFPMLAYPFYLWSRSPGKK-- 252

Query: 209 RFACHFDPSGPIYSDRERLQIYISDIGIFAATYVLYQIAMAKGLAWLISIYGIPLLIVNA 268
               HFDP+  ++   ER  +  S +   A   +L  +    G   L+ +YG+P ++   
Sbjct: 253 --GSHFDPNSDLFVPNERKDVITSTVCWTAMAALLVGLGFVMGPIQLLKLYGVPYVLFVM 310

Query: 269 FLVTITYLQH--THPALPHYDSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVTHHLFS 326
           +L  +TYL H      LP Y   EW +LRG L+T+DRDYG++N + H+I  THV HHLF 
Sbjct: 311 WLDLVTYLHHHGHEDKLPWYRGQEWSYLRGGLTTLDRDYGLINNIHHDI-GTHVIHHLFP 369

Query: 327 TMPHYHAMEATKAIKPILGEYYQ 349
            +PHYH +EAT+A KP+LG YY+
Sbjct: 370 QIPHYHLIEATEAAKPVLGRYYK 392


>IMGA|Medtr8g145530.1 Fatty acid desaturase
           chr08_pseudomolecule_IMGAG_V3 35397649-35391594 E
           EGN_Mt090430 20090702
          Length = 446

 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 21/280 (7%)

Query: 73  IAASYFHLLPSPISYIAW---PIYWTLQGCTLTGVWVIAHECGHHAFSDYQWVDDTVGLI 129
           I+A+ + L    IS   W   P+ W   G  +TG +VI H+C H +FS  + V+D VG +
Sbjct: 131 ISATSYALGLLMISKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSTNKLVEDIVGTL 190

Query: 130 LHSSLLVPYFSWKISHRRHHSNTGSIERDEVFVPKFKSRIPWYSQYLNNPLGRXXXXXXX 189
               L+ PY  W+  H +HH+ T  ++ D  + P       W  ++ ++P  R       
Sbjct: 191 AFLPLIYPYEPWRFKHDKHHAKTNMLKEDTAWQPV------WQDEFESSPFLRKAIIYG- 243

Query: 190 XXVGWPLYLAFNVSGRPYNRFACHFDPSGPIYSDRERLQIYISDIGIFAATYVLYQIAMA 249
                  Y  F       +    HFD     +   E  ++ IS   +FA   + + + + 
Sbjct: 244 -------YGPFRCWMSIAHWLVSHFDLK--TFRPNEIKRVKISLACVFAFIAIGWPLIIY 294

Query: 250 K-GLAWLISIYGIPLLIVNAFLVTITYLQHTHPALPHYDSSEWDWLRGALS-TVDRDYGV 307
           K G+   I  + +P L  + ++ T T + HT P +P  +S EW+  +  L+ TV   Y  
Sbjct: 295 KTGIMGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKNSEEWNAAQAQLNGTVHCAYPQ 354

Query: 308 LNKVFHNITDTHVTHHLFSTMPHYHAMEATKAIKPILGEY 347
             ++  +  + H+ HH+   +P Y+   A K+I+   G+Y
Sbjct: 355 WIEILCHDINVHIPHHISPKIPSYNLRAAHKSIQENWGKY 394