Jatropha Genome Database

JcCA0251221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0251221.10 - phase: 1 /pseudo/partial
         (239 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g145580.1 Actin-binding FH2; C2 calcium/lipid-binding...   270   3e-73
IMGA|Medtr5g026810.1 Actin-binding FH2 chr05_pseudomolecule_IMGA...   249   6e-67
IMGA|Medtr1g016730.1 Actin-binding FH2; C2 calcium/lipid-binding...   165   2e-41
IMGA|Medtr1g016720.1 Formin-like protein 6, putative chr01_pseud...    97   7e-21

>IMGA|Medtr8g145580.1 Actin-binding FH2; C2 calcium/lipid-binding
            region, CaLB; chr08_pseudomolecule_IMGAG_V3
            35409574-35425027 E EGN_Mt090430 20090702
          Length = 1180

 Score =  270 bits (691), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 138/197 (70%), Positives = 158/197 (80%)

Query: 34   KHLMCSPWMPGLHIYNSSLLGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLSEKLPE 93
            K +M +    G  +   +  GSAIGFRLDSLLKLT+TRARNNKMTLMHYLCKVL +KLPE
Sbjct: 968  KRIMQTILTLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLDDKLPE 1027

Query: 94   LLDFPKDLMNLEAATKIQLKYLAEEMQAISKGLEKVVQELTASENDGQVSESFCKILKEF 153
            +LDF KDL NLE A KIQLK+LAEEMQA++KGLEKVVQEL+ SENDG +SE+F K LK F
Sbjct: 1028 VLDFSKDLANLEPAAKIQLKFLAEEMQAVNKGLEKVVQELSTSENDGPISETFRKKLKGF 1087

Query: 154  LSSAESEVRSLALLYSTVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFSRAHEENC 213
            L SAE+EVR+LA LYS VG+N DAL LYFGEDP+RC FEQVV+TLLNF RMF++AHEEN 
Sbjct: 1088 LCSAEAEVRTLASLYSGVGKNVDALILYFGEDPSRCQFEQVVTTLLNFTRMFNKAHEENR 1147

Query: 214  KQLEFERKKQRGMQKMK 230
            KQLE E KK     K K
Sbjct: 1148 KQLELEMKKTAESDKKK 1164


>IMGA|Medtr5g026810.1 Actin-binding FH2
           chr05_pseudomolecule_IMGAG_V3 10855138-10852228 E
           EGN_Mt090430 20090702
          Length = 284

 Score =  249 bits (637), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 120/189 (63%), Positives = 151/189 (79%)

Query: 34  KHLMCSPWMPGLHIYNSSLLGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLSEKLPE 93
           + +M +    G  +   +  GSA+GF+LDSLLKL+DTRARNNKMTLMHYLCK+L+EK+PE
Sbjct: 74  RQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPE 133

Query: 94  LLDFPKDLMNLEAATKIQLKYLAEEMQAISKGLEKVVQELTASENDGQVSESFCKILKEF 153
           L+DF KDL++LEAA+KIQLK LAEEMQA+ KGLEKV QELTASENDG +S  F K+LK F
Sbjct: 134 LIDFDKDLVHLEAASKIQLKALAEEMQAVHKGLEKVEQELTASENDGSISSGFRKVLKNF 193

Query: 154 LSSAESEVRSLALLYSTVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFSRAHEENC 213
           L  AE++VRSL  LY+ VGRNAD+L+ YFGEDPARCPFEQV   L+ FV+ F+++ EEN 
Sbjct: 194 LDFAEADVRSLISLYADVGRNADSLSKYFGEDPARCPFEQVTQILVVFVKTFNKSREENE 253

Query: 214 KQLEFERKK 222
           +  + E+KK
Sbjct: 254 RLADAEKKK 262


>IMGA|Medtr1g016730.1 Actin-binding FH2; C2 calcium/lipid-binding
            region, CaLB; chr01_pseudomolecule_IMGAG_V3
            3303853-3295156 H EGN_Mt090430 20090702
          Length = 1641

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/129 (66%), Positives = 96/129 (74%), Gaps = 23/129 (17%)

Query: 44   GLHIYNSSLLGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKV----------------- 86
            G  + + +  GSA+GFRLDSLLKLTDTRARNNKMTLMHYLCKV                 
Sbjct: 1499 GNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVNTHFLKFQYEMFLHKKF 1558

Query: 87   ------LSEKLPELLDFPKDLMNLEAATKIQLKYLAEEMQAISKGLEKVVQELTASENDG 140
                  L+EKLPELLDF KDL+NLE ATKIQLKYLAEEMQAISKGLEKV+QEL+ASENDG
Sbjct: 1559 CFSSQVLAEKLPELLDFSKDLVNLEGATKIQLKYLAEEMQAISKGLEKVIQELSASENDG 1618

Query: 141  QVSESFCKI 149
             VSE FC++
Sbjct: 1619 PVSEVFCQV 1627


>IMGA|Medtr1g016720.1 Formin-like protein 6, putative
           chr01_pseudomolecule_IMGAG_V3 3295154-3294211 H
           EGN_Mt090430 20090702
          Length = 86

 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 41/51 (80%), Positives = 47/51 (92%)

Query: 172 GRNADALALYFGEDPARCPFEQVVSTLLNFVRMFSRAHEENCKQLEFERKK 222
           GRNADALA YFGEDP RCPFEQVV+TL+NFVRMF RAH+EN KQ+E+E+KK
Sbjct: 4   GRNADALASYFGEDPQRCPFEQVVATLMNFVRMFIRAHDENVKQIEYEKKK 54