Jatropha Genome Database

JcCA0247191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0247191.10 + phase: 1 /partial
         (136 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g103670.1 Aminotransferase class-III; ; chr04_pseudom...   226   3e-60

>IMGA|Medtr4g103670.1 Aminotransferase class-III; ;
           chr04_pseudomolecule_IMGAG_V3 22386014-22374646 E
           EGN_Mt090430 20090702
          Length = 525

 Score =  226 bits (575), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 105/118 (88%), Positives = 113/118 (95%)

Query: 19  VKLVWYYNNALGRPNKKKFIARAKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH 78
           VKLVWYY NALG+P+KKKFIAR KSYHGSTLI+ASLSGL ALHQKFDLPAPFVLHTDCPH
Sbjct: 175 VKLVWYYYNALGKPDKKKFIARTKSYHGSTLIAASLSGLSALHQKFDLPAPFVLHTDCPH 234

Query: 79  YWRYHLPGETEEEFSSRLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPASYFEK 136
           YWRYHLPGETEEEF++RLA NLE+LILKEGPETIAAFIAEPVMGAGGVI PPA+YF+K
Sbjct: 235 YWRYHLPGETEEEFATRLANNLEELILKEGPETIAAFIAEPVMGAGGVILPPAAYFDK 292