Jatropha Genome Database
- JcCA0242371.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0242371.10 - phase: 0 /pseudo/partial
(147 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3 19... 244 8e-66
IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 21... 244 1e-65
IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3 87... 243 2e-65
IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32... 239 5e-64
IMGA|Medtr6g099230.1 Ras small GTPase, Rab type chr06_pseudomole... 224 1e-59
IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32... 127 2e-30
IMGA|Medtr1g081200.1 Sigma-54 factor, interaction region; Ras sm... 81 2e-16
IMGA|Medtr7g118430.1 Ras GTPase; Sigma-54 factor, interaction re... 81 2e-16
IMGA|Medtr7g093170.1 Ras GTPase; Sigma-54 factor, interaction re... 80 3e-16
IMGA|Medtr1g081200.3 Sigma-54 factor, interaction region; Ras sm... 80 3e-16
IMGA|Medtr2g005330.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 18... 80 4e-16
IMGA|Medtr2g097820.1 Sigma-54 factor, interaction region; Ras sm... 79 7e-16
IMGA|Medtr3g092520.1 Sigma-54 factor, interaction region; Ras sm... 77 2e-15
IMGA|Medtr4g078950.1 Sigma-54 factor, interaction region; Ras sm... 76 8e-15
IMGA|Medtr3g143270.1 Ras GTPase; Sigma-54 factor, interaction re... 75 1e-14
IMGA|Medtr2g091780.1 Sigma-54 factor, interaction region; Ras sm... 75 2e-14
IMGA|Medtr2g018470.1 Sigma-54 factor, interaction region; Ras sm... 74 3e-14
IMGA|Medtr2g005340.1 Sigma-54 factor, interaction region; Ras sm... 74 3e-14
IMGA|Medtr4g109180.1 Sigma-54 factor, interaction region; Ras sm... 73 5e-14
IMGA|Medtr3g101960.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3 2... 72 7e-14
IMGA|Medtr6g022720.1 Sigma-54 factor, interaction region; Ras sm... 72 1e-13
IMGA|Medtr2g114540.1 Sigma-54 factor, interaction region; Ras sm... 72 1e-13
IMGA|Medtr3g086620.1 Ras small GTPase, Rab type; chr03_pseudomol... 72 1e-13
IMGA|Medtr2g033230.1 Sigma-54 factor, interaction region; Ras sm... 70 3e-13
IMGA|Medtr5g014080.1 Ras small GTPase, Rab type; chr05_pseudomol... 70 4e-13
IMGA|Medtr8g034870.1 Sigma-54 factor, interaction region; Ras sm... 70 4e-13
IMGA|Medtr7g046180.1 Ras-related protein ARA-1, putative chr07_p... 69 7e-13
IMGA|Medtr5g084520.1 Ras small GTPase, Rab type; chr05_pseudomol... 69 8e-13
IMGA|Medtr2g132390.1 Sigma-54 factor, interaction region; Ras sm... 68 1e-12
IMGA|Medtr8g034810.1 Ras small GTPase, Rab type chr08_pseudomole... 68 1e-12
IMGA|Medtr2g123110.1 Ras small GTPase, Rab type; chr02_pseudomol... 68 2e-12
IMGA|Medtr8g029570.1 Ras small GTPase, Rab type; chr08_pseudomol... 68 2e-12
IMGA|Medtr4g158780.1 Ras small GTPase, Rab type; chr04_pseudomol... 68 2e-12
IMGA|Medtr4g142850.1 Sigma-54 factor, interaction region; Ras sm... 66 5e-12
IMGA|Medtr3g073500.1 Sigma-54 factor, interaction region; Ras sm... 65 1e-11
IMGA|Medtr2g122890.1 Sigma-54 factor, interaction region; Ras sm... 65 1e-11
IMGA|Medtr4g095400.1 Sigma-54 factor, interaction region; Ras sm... 64 3e-11
IMGA|Medtr4g141030.1 Sigma-54 factor, interaction region; Ras sm... 64 3e-11
IMGA|Medtr4g009230.1 Sigma-54 factor, interaction region; Ras sm... 64 4e-11
IMGA|Medtr4g142850.2 Sigma-54 factor, interaction region; Ras sm... 60 5e-10
IMGA|Medtr3g136520.2 Ras small GTPase, Rab type chr03_pseudomole... 59 7e-10
IMGA|Medtr3g136520.1 Ras small GTPase, Rab type chr03_pseudomole... 59 1e-09
IMGA|Medtr3g136500.1 Ras small GTPase, Rab type chr03_pseudomole... 59 1e-09
IMGA|Medtr3g136510.1 Ras small GTPase, Rab type chr03_pseudomole... 59 1e-09
IMGA|Medtr3g136510.2 Ras small GTPase, Rab type chr03_pseudomole... 59 1e-09
IMGA|Medtr3g101760.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3 2... 56 8e-09
IMGA|Medtr1g081200.2 Ras small GTPase, Rab type chr01_pseudomole... 55 2e-08
IMGA|Medtr1g081210.1 Ras small GTPase, Rab type chr01_pseudomole... 54 2e-08
IMGA|Medtr3g136500.2 Ras small GTPase, Rab type chr03_pseudomole... 52 9e-08
IMGA|Medtr7g145740.1 Ras small GTPase, Rab type; chr07_pseudomol... 50 6e-07
IMGA|Medtr1g086440.1 Calcium-binding EF-hand; Ras small GTPase, ... 49 7e-07
IMGA|Medtr5g099390.1 Ras small GTPase, Rab type chr05_pseudomole... 48 2e-06
IMGA|Medtr1g099480.1 Calcium-binding EF-hand; chr01_pseudomolecu... 48 2e-06
>IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3
19209541-19213679 F EGN_Mt090430 20090702
Length = 197
Score = 244 bits (624), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 116/120 (96%), Positives = 120/120 (100%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPELKHYAPGVP+ILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
>IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3
21246015-21242846 F EGN_Mt090430 20090702
Length = 197
Score = 244 bits (622), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/120 (94%), Positives = 119/120 (99%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGST+NLGLWD
Sbjct: 1 MSGSRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+AKKWIPEL+HYAPGVP+ILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKL 120
>IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3
8775550-8778414 E EGN_Mt090430 20090702
Length = 197
Score = 243 bits (621), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/139 (85%), Positives = 126/139 (90%), Gaps = 3/139 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GS VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPELKHYAPGVP+ILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 ---GNVTVAIDHLHGIDIS 136
+ IDH + I+
Sbjct: 121 DLRDDKQFCIDHPGAVPIT 139
>IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
32003647-32002013 E EGN_Mt090430 20090702
Length = 196
Score = 239 bits (609), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 109/120 (90%), Positives = 118/120 (98%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYEN++KKWIPEL+HYAP VP++LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKL 120
>IMGA|Medtr6g099230.1 Ras small GTPase, Rab type
chr06_pseudomolecule_IMGAG_V3 21851607-21855202 F
EGN_Mt090430 20090702
Length = 209
Score = 224 bits (572), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 102/120 (85%), Positives = 113/120 (94%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSAS+FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDGS VNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYENV KKW+PEL+ +AP VP++LVGTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
>IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3
32003647-32002723 E EGN_Mt090430 20090702
Length = 67
Score = 127 bits (319), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQE 65
TAG
Sbjct: 61 TAGNH 65
>IMGA|Medtr1g081200.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr01_pseudomolecule_IMGAG_V3
16060257-16053471 E EGN_Mt090430 20090702
Length = 216
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ K WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQHASDNVNKILVGNK 129
>IMGA|Medtr7g118430.1 Ras GTPase; Sigma-54 factor, interaction
region chr07_pseudomolecule_IMGAG_V3 27950642-27953739 F
EGN_Mt090430 20090702
Length = 216
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNK 129
>IMGA|Medtr7g093170.1 Ras GTPase; Sigma-54 factor, interaction
region chr07_pseudomolecule_IMGAG_V3 20752031-20755936 F
EGN_Mt090430 20090702
Length = 202
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAP-GVPVILVGTK 119
E + + YRGA I+ + + + S+ NV K+W+ E+ YA V +LVG K
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNK 122
>IMGA|Medtr1g081200.3 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr01_pseudomolecule_IMGAG_V3
16060257-16054311 E EGN_Mt090430 20090702
Length = 171
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ K WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQHASDNVNKILVGNK 129
>IMGA|Medtr2g005330.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
184635-185968 F EGN_Mt090430 20090702
Length = 203
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 6/136 (4%)
Query: 1 MSASRF---IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNL 56
MS++ + K + +GD +VGK+C+L+ + +++ Y+ T+ +F V ++G T L
Sbjct: 1 MSSNEYDYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKL 60
Query: 57 GLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVIL 115
+WDTAGQE + + YRGA I+ + + S+ NV K+W+ E+ YA V +L
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDIESFNNV-KQWLHEIDRYANHSVSKLL 119
Query: 116 VGTKLGNVTVAIDHLH 131
VG K + H H
Sbjct: 120 VGNKCDLTDNKLVHTH 135
>IMGA|Medtr2g097820.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
22987161-22993145 E EGN_Mt090430 20090702
Length = 218
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VD + +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E Y + YRGA +L + + +A++EN A +W+ EL+ H P + V+L+G K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENAA-RWLKELRDHTDPNIVVMLIGNK 127
>IMGA|Medtr3g092520.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr03_pseudomolecule_IMGAG_V3
21753746-21751718 E EGN_Mt090430 20090702
Length = 216
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKLGNVT 124
E Y + YRGA +L + + + ++ENV ++W+ EL+ +A VI++ GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENV-QRWLRELRDHADSNIVIMLA---GNKS 127
Query: 125 VAIDHLHGI 133
++HL +
Sbjct: 128 -DLNHLRAV 135
>IMGA|Medtr4g078950.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
15573426-15577863 E EGN_Mt090430 20090702
Length = 216
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRL--RPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E ++ + YRGA +L + + +AS+ N+ + WI + +H + V ILVG K
Sbjct: 75 ERFSFVINNFTYYRGAMGILLVYDVTDEASFNNI-RNWIRNIEQHASDNVNKILVGNK 131
>IMGA|Medtr3g143270.1 Ras GTPase; Sigma-54 factor, interaction
region; chr03_pseudomolecule_IMGAG_V3 36921743-36915347
E EGN_Mt090430 20090702
Length = 207
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS++F + PT+ +F +DG + L +WDTAGQE
Sbjct: 13 FKLLMIGDSGVGKSSLLLCFTSDSFE-NLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQE 71
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVI--LVGTKLGNV 123
+ L YRGA I+A+ + + ++ N+++ W E+ Y+ I LVG K+
Sbjct: 72 RFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVDKE 131
Query: 124 T-VAIDHLHGIDISE 137
+ + GID +
Sbjct: 132 SDRVVTKKEGIDFAR 146
>IMGA|Medtr2g091780.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
20763526-20767375 E EGN_Mt090430 20090702
Length = 217
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E Y + YRGA +L + + A++ENV +W+ EL+ H + V+LVG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFENV-DRWLKELRNHTDSNIVVMLVGNK 127
>IMGA|Medtr2g018470.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
4871209-4868238 F EGN_Mt090430 20090702
Length = 217
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E Y + YRGA +L + + ++ENV ++W+ EL+ H + V+LVG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVVMLVGNK 127
>IMGA|Medtr2g005340.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
188745-187533 F EGN_Mt090430 20090702
Length = 220
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 15 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKLGNVT 124
E Y + YRGA +L + + +++NV +W+ EL+ +A VI++ +GN T
Sbjct: 75 ERYRAITSAYYRGALGALLVYDVTKPTTFDNVT-RWLKELRDHADANIVIML---IGNKT 130
Query: 125 VAIDHLHGI 133
+ HL +
Sbjct: 131 -DLKHLRAV 138
>IMGA|Medtr4g109180.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
24355316-24353037 E EGN_Mt090430 20090702
Length = 217
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E Y + YRGA +L + + ++ENV ++W+ EL+ H + ++LVG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNK 127
>IMGA|Medtr3g101960.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3
24774853-24778399 E EGN_Mt090430 20090702
Length = 222
Score = 72.4 bits (176), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ +L + N F D T+ F +V++ +V +WDTAGQE
Sbjct: 18 KVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQER 77
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGTK 119
Y + YRGA +L + + + S++++ +W+ EL+++A + +IL+G K
Sbjct: 78 YRAVTSAYYRGAVGAMLVYDITKRPSFDHIP-RWLEELRNHADKNIVIILIGNK 130
>IMGA|Medtr6g022720.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr06_pseudomolecule_IMGAG_V3
5114319-5120121 E EGN_Mt090430 20090702
Length = 211
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS K + +GD VGK+C+L+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGT 118
DTAGQE + + YRGA +L + + + ++ ++A W+ + + +A P + + L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANPNMTITLIGN 119
Query: 119 K 119
K
Sbjct: 120 K 120
>IMGA|Medtr2g114540.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
27107054-27104346 E EGN_Mt090430 20090702
Length = 213
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQ 64
IK + +GD VGK+ +L+ ++ + F T Y+ T+ D + + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPG--VPVILVGTKL 120
E + + YRGA +L + + ++S+ N+ WI ++ ++ V ILVG K+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIT-NWIRSIEQHSSDNIVNKILVGNKV 131
>IMGA|Medtr3g086620.1 Ras small GTPase, Rab type;
chr03_pseudomolecule_IMGAG_V3 20313622-20319074 E
EGN_Mt090430 20090702
Length = 200
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
Y+ L P+ YRGA I+ + + S S+ AKKW+ EL K P + + L G K
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFSR-AKKWVQELQKQGNPNMVMALAGNK 124
>IMGA|Medtr2g033230.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
9016235-9019888 F EGN_Mt090430 20090702
Length = 211
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGT 118
DTAGQE + + YRGA +L + + + ++ ++A W+ + + +A + ++L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGN 119
Query: 119 K 119
K
Sbjct: 120 K 120
>IMGA|Medtr5g014080.1 Ras small GTPase, Rab type;
chr05_pseudomolecule_IMGAG_V3 4443349-4447486 E
EGN_Mt090430 20090702
Length = 223
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
+ L P R + V ++ + + S+ ++ N KWI E++ V ++LVG K
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQTFLNTT-KWIEEVRTERGSDVIIVLVGNK 123
>IMGA|Medtr8g034870.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr08_pseudomolecule_IMGAG_V3
7638438-7637794 E EGN_Mt090430 20090702
Length = 215
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS S K + +GD VGK+C+L+ +T N F + T+ F + ++ ++V L +W
Sbjct: 1 MSRSYAFKYIIIGDTGVGKSCLLLQFTDNRFQRFHDVTIGVEFGIRTININNNSVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPG-VPVILVGT 118
DTAGQE + + YR A +L + + + +++++A W+ + + +A + ++LVG
Sbjct: 61 DTAGQERFRSITRSYYRKAAGALLVYDITRRETFDHMA-TWLEDARQHASSDMIIMLVGN 119
Query: 119 K 119
K
Sbjct: 120 K 120
>IMGA|Medtr7g046180.1 Ras-related protein ARA-1, putative
chr07_pseudomolecule_IMGAG_V3 11284278-11288236 F
EGN_Mt090430 20090702
Length = 215
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L + N F ++ T+ F +V +DG V +WDTAGQ
Sbjct: 13 LFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA ++ + + + ++E++ K+W+ EL V +LVG K
Sbjct: 73 ERFRAVTSAYYRGAFGALVVYDISRRGTFESI-KRWLDELTTQNDSTVARMLVGNK 127
>IMGA|Medtr5g084520.1 Ras small GTPase, Rab type;
chr05_pseudomolecule_IMGAG_V3 32172903-32178330 E
EGN_Mt090430 20090702
Length = 200
Score = 68.9 bits (167), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
Y+ L P+ YRGA I+ + + + S+ AKKW+ EL K P + V G K
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTR-AKKWVQELQKQGNPNMVVAFAGNK 124
>IMGA|Medtr2g132390.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
31999589-31997335 F EGN_Mt090430 20090702
Length = 215
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ +V + V +WDTAGQ
Sbjct: 11 LFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQ 70
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTKLGNV 123
E Y + YRGA +L + ++ENV ++W+ EL+ H V ++LVG K
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDSTRHVTFENV-ERWLKELRDHTDAYVVIMLVGNK---- 125
Query: 124 TVAIDHLHGIDISE 137
+ HL + E
Sbjct: 126 -ADLKHLQAVSTEE 138
>IMGA|Medtr8g034810.1 Ras small GTPase, Rab type
chr08_pseudomolecule_IMGAG_V3 7613157-7612519 E
EGN_Mt090430 20090702
Length = 187
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS S K + +GD VGK+C+L+ +T N F + T+ F + ++ + V L +W
Sbjct: 1 MSRSYAFKYIIIGDIGVGKSCLLLQFTDNRFQRFHDTTIGVEFGIRTININNNPVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVI-LVGT 118
DTAGQE ++ + YR A +L + + + +++++A W+ + + +A +I L+G
Sbjct: 61 DTAGQERFSSITKSYYRKAADALLVYDITRRETFDHMA-TWLEDARQHASSDTIIMLIGN 119
Query: 119 K 119
K
Sbjct: 120 K 120
>IMGA|Medtr2g123110.1 Ras small GTPase, Rab type;
chr02_pseudomolecule_IMGAG_V3 29724457-29722809 E
EGN_Mt090430 20090702
Length = 200
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD GKT + + + F + PT+ F ++ + +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSLSEATVKFDIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
Y+ L P+ YRGA I+ + + S ++ AKKW+ EL +H + + + LV K
Sbjct: 72 YHSLAPMYYRGAAAAIVVYDISSIDTFVR-AKKWVQELQRHGSQKLVMALVANK 124
>IMGA|Medtr8g029570.1 Ras small GTPase, Rab type;
chr08_pseudomolecule_IMGAG_V3 6558177-6560109 E
EGN_Mt090430 20090702
Length = 216
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 17/113 (15%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDY 67
K V +GD AVGKT +L ++ N V ++G + +WDTAGQE Y
Sbjct: 28 KVVVIGDSAVGKTQILSRFSKNE---------------TVTINGKVIKAQIWDTAGQERY 72
Query: 68 NRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPG-VPVILVGTK 119
+ YRGA +L + + + S+++VA KW+ EL+ +A + ++LVG K
Sbjct: 73 RAVTSAYYRGALGAMLVYDITKRQSFDHVA-KWVEELRAHADNSIVIMLVGNK 124
>IMGA|Medtr4g158780.1 Ras small GTPase, Rab type;
chr04_pseudomolecule_IMGAG_V3 39962115-39963689 E
EGN_Mt090430 20090702
Length = 190
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 10 VTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYN 68
V +GD GKT +++ + F T+ F V+ ++ +TV +WDTAGQE Y+
Sbjct: 5 VLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYH 64
Query: 69 RLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGTK 119
L P+ YRG+ I+ + + S S+ AKKW+ E++ A P + ++LV K
Sbjct: 65 SLAPMYYRGSAAAIVVYDITSMDSFVR-AKKWVREVQRQANPNLIMLLVANK 115
>IMGA|Medtr4g142850.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
35680571-35684293 E EGN_Mt090430 20090702
Length = 217
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS+ F D PT+ +F V ++G + L +WDTAGQE
Sbjct: 14 FKLLMIGDSGVGKSSLLLRFTSDDFD-DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQE 72
Query: 66 DYNRLRPLSYRGADVFILA---------FSLISKASYENVAKKWIPELKHYAPGVPV--I 114
+ L YRGA I+ + + + ++ N+++ W E+ Y+ +
Sbjct: 73 RFRTLTSSYYRGAQGIIMGNISWKQLVFYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKM 132
Query: 115 LVGTKL 120
LVG K+
Sbjct: 133 LVGNKV 138
>IMGA|Medtr3g073500.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr03_pseudomolecule_IMGAG_V3
17019246-17019911 H EGN_Mt090430 20090702
Length = 221
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS S K + +GD VGK+C+++ + N F + T+ F + ++ + V L +W
Sbjct: 1 MSHSYAFKYIIIGDTGVGKSCLVLQFMDNRFQRFHNATIGVGFGFKTININNNPVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPG-VPVILVGT 118
DTAGQE + + YR A +L + + + ++ ++A W+ + + +A + ++L+G
Sbjct: 61 DTAGQERFRSITKSYYRKAACALLVYDITRRETFNHLA-TWLEDARQHASSDMIIMLIGN 119
Query: 119 K 119
K
Sbjct: 120 K 120
>IMGA|Medtr2g122890.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
29644699-29641448 E EGN_Mt090430 20090702
Length = 209
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V V+ L +WDTAGQ
Sbjct: 10 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQVEDRLFTLQIWDTAGQ 69
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAPGVPVILVGTKLGNV 123
E + L YRGAD +L + + S+EN+ W E L +P P LGN
Sbjct: 70 ERFQSLGVAFYRGADCCVLVYDVNVMKSFENL-NHWREEFLIQASPSDPENFPFVVLGN- 127
Query: 124 TVAIDHLHGIDISEL*LVSCCGVK 147
V +D + +SE + C K
Sbjct: 128 KVDVDGGNSRVVSEKKAKAWCASK 151
>IMGA|Medtr4g095400.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
19838057-19834450 F EGN_Mt090430 20090702
Length = 206
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-----PGVPVILVGTK 119
E + L YRGAD +L + + S S++N+ W E A P +++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNL-NNWREEFLIQANPSDPENFPFVVIGNK 126
Query: 120 L 120
+
Sbjct: 127 I 127
>IMGA|Medtr4g141030.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
34720246-34722755 E EGN_Mt090430 20090702
Length = 209
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + ++VD V L +WDTAGQ
Sbjct: 12 LLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPG----VPVILVGTKL 120
E ++ L YRGAD +L + + +++ + LK G P +L+G K+
Sbjct: 72 ERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPDAFPFVLLGNKV 131
>IMGA|Medtr4g009230.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
1421872-1425592 F EGN_Mt090430 20090702
Length = 207
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M++ R +K + +GD VGKT ++ Y + F Y T+ +F + V + L
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAP----GVP 112
+WDTAGQE + L YRGAD +L + + S+EN+ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENL-NHWREEFLIQASPSDPENFP 119
Query: 113 VILVGTKL 120
+++G K+
Sbjct: 120 FVVLGNKI 127
>IMGA|Medtr4g142850.2 Sigma-54 factor, interaction region; Ras
small GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
35680571-35684293 E EGN_Mt090430 20090702
Length = 93
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS+ F D PT+ +F V ++G + L +WDTAGQE
Sbjct: 14 FKLLMIGDSGVGKSSLLLRFTSDDFD-DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQE 72
Query: 66 DYNRLRPLSYRGADVFILA 84
+ L YRGA I+
Sbjct: 73 RFRTLTSSYYRGAQGIIMG 91
>IMGA|Medtr3g136520.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34476760-34478596 E
EGN_Mt090430 20090702
Length = 199
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ LR Y I+ F + ++ +Y+NV W +L +P++L G K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKV 127
>IMGA|Medtr3g136520.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34476760-34479459 E
EGN_Mt090430 20090702
Length = 221
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ LR Y I+ F + ++ +Y+NV W +L +P++L G K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKV 127
>IMGA|Medtr3g136500.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34470742 E
EGN_Mt090430 20090702
Length = 221
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ LR Y I+ F + ++ +Y+NV W +L +P++L G K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKV 127
>IMGA|Medtr3g136510.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34474773 E
EGN_Mt090430 20090702
Length = 221
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ LR Y I+ F + ++ +Y+NV W +L +P++L G K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKV 127
>IMGA|Medtr3g136510.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34471191-34474773 E
EGN_Mt090430 20090702
Length = 221
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ LR Y I+ F + ++ +Y+NV W +L +P++L G K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKV 127
>IMGA|Medtr3g101760.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3
24679515-24681411 E EGN_Mt090430 20090702
Length = 101
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSL 87
+ L P R + V ++ + +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDV 91
>IMGA|Medtr1g081200.2 Ras small GTPase, Rab type
chr01_pseudomolecule_IMGAG_V3 16060257-16053471 E
EGN_Mt090430 20090702
Length = 181
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-K 105
+ +DG + L +WDTAGQE + + YRGA +L + + ++S+ N+ K WI + +
Sbjct: 22 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQ 80
Query: 106 HYAPGVPVILVGTK 119
H + V ILVG K
Sbjct: 81 HASDNVNKILVGNK 94
>IMGA|Medtr1g081210.1 Ras small GTPase, Rab type
chr01_pseudomolecule_IMGAG_V3 16067992-16061303 E
EGN_Mt090430 20090702
Length = 181
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-K 105
+ +DG + L +WDTAGQE + + YRGA +L + + ++S+ N+ K WI + +
Sbjct: 22 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQ 80
Query: 106 HYAPGVPVILVGTK 119
H + V ILVG K
Sbjct: 81 HASDNVNKILVGNK 94
>IMGA|Medtr3g136500.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34470742 E
EGN_Mt090430 20090702
Length = 116
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHY 107
+ LR Y I+ F + ++ +Y+NV W +L Y
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRY 114
>IMGA|Medtr7g145740.1 Ras small GTPase, Rab type;
chr07_pseudomolecule_IMGAG_V3 34737364-34737979 F
EGN_Mt090430 20090702
Length = 98
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQED 66
K V +GD AVGKT ML + N F D T+ F V ++G + +WDTAGQE
Sbjct: 22 KVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIWDTAGQER 81
Query: 67 Y 67
+
Sbjct: 82 F 82
>IMGA|Medtr1g086440.1 Calcium-binding EF-hand; Ras small GTPase, Rab
type; ; chr01_pseudomolecule_IMGAG_V3 17111254-17102829
E EGN_Mt090430 20090702
Length = 640
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVF-DNFSANVVVDGSTVNLGLWDTAGQE 65
++ V VGD + GKT ++ + S++FP P + + +N D +V L L DT
Sbjct: 13 VRIVIVGDKSAGKTTLISAMASDSFPATVPPLLRPTHLPSNSFTD--SVPLILIDTPSSV 70
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ AD I+ ++ + S+E V+ W+P+L+ PV++VG KL
Sbjct: 71 GEQGKVVEELKRADSVIVTYACDNTMSFERVSTHWLPQLQKLEVKAPVLVVGCKL 125
>IMGA|Medtr5g099390.1 Ras small GTPase, Rab type
chr05_pseudomolecule_IMGAG_V3 39733208-39730184 E
EGN_Mt090430 20090702
Length = 289
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQE 65
+K +GD +GKT LI Y N + N + V G+ ++ +WD AG +
Sbjct: 105 LKISLLGDCHIGKTTFLIKYVGNEVEKRSLQMEGLNLMDKTLYVQGARISFCIWDVAGDK 164
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKLGN 122
P++ + A ++ F L S+++ NV W E + + IL+GTK +
Sbjct: 165 KSLDQIPMACKDAVALLIMFDLTSRSTLNNVV-GWYSEARKWNQTAIPILIGTKFDD 220
>IMGA|Medtr1g099480.1 Calcium-binding EF-hand;
chr01_pseudomolecule_IMGAG_V3 20333411-20342012 E
EGN_Mt090430 20090702
Length = 230
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ-E 65
++ V GD GK+ ++ + ++ F + P V + V + V + + DT+ +
Sbjct: 17 VRIVVAGDQGTGKSSLISTASTENFRPNVAP-VLPPTTLAVDLYPDRVPITIIDTSSRVA 75
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKLG---- 121
D NR+ R AD +L ++ + EN++ W+P L++ VPVI+VG KL
Sbjct: 76 DSNRVAEELQR-ADTVVLTYACDRPETLENLSTVWLPHLRNLEVNVPVIVVGCKLDLRDE 134
Query: 122 NVTVAIDHLHGIDISEL*LVSCC 144
N V+++ + + + + C
Sbjct: 135 NQQVSLEQVMSPIMQQFREIETC 157