Jatropha Genome Database

JcCA0242131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0242131.10 + phase: 1 /TE/partial
         (474 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g129380.1 H+ transporting ATPase, proton pump chr08_p...   117   9e-27
IMGA|Medtr3g133390.1 H+ transporting ATPase, proton pump chr03_p...   110   1e-24
IMGA|Medtr2g041550.1 H+ transporting ATPase, proton pump chr02_p...   107   9e-24

>IMGA|Medtr8g129380.1 H+ transporting ATPase, proton pump
           chr08_pseudomolecule_IMGAG_V3 30548785-30552354 H
           EGN_Mt090430 20090702
          Length = 250

 Score =  117 bits (294), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 60/62 (96%)

Query: 178 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQ 237
           QSALTGESLPVT+NPGD VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLV++T+ VGHFQ
Sbjct: 183 QSALTGESLPVTRNPGDEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 242

Query: 238 KV 239
           K+
Sbjct: 243 KL 244


>IMGA|Medtr3g133390.1 H+ transporting ATPase, proton pump
           chr03_pseudomolecule_IMGAG_V3 33794639-33791892 E
           EGN_Mt090430 20090702
          Length = 246

 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 52/63 (82%), Positives = 57/63 (90%)

Query: 178 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQ 237
           QSALTGESLP TKNP D V+SGST K+GEIEAVVIATGVHTFFGKAAHLV++T+ VGHFQ
Sbjct: 180 QSALTGESLPATKNPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 239

Query: 238 KVF 240
           KV 
Sbjct: 240 KVL 242


>IMGA|Medtr2g041550.1 H+ transporting ATPase, proton pump
           chr02_pseudomolecule_IMGAG_V3 11416534-11420473 H
           EGN_Mt090430 20090702
          Length = 252

 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 50/60 (83%), Positives = 58/60 (96%)

Query: 178 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQ 237
           Q+ALTGESLPVT++PG  V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV++T++VGHFQ
Sbjct: 185 QAALTGESLPVTRHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQ 244