Jatropha Genome Database
- JcCA0237741.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0237741.10 - phase: 0 /pseudo/partial
(457 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC235009_42.1 Zinc finger, Sec23/Sec24-type; Sec23/Sec24 tr... 464 e-131
IMGA|AC235006_31.1 Zinc finger, Sec23/Sec24-type; Sec23/Sec24 tr... 464 e-131
IMGA|Medtr3g104400.2 Zinc finger, Sec23/Sec24-type; Sec23/Sec24 ... 270 9e-73
IMGA|Medtr3g104400.1 Zinc finger, Sec23/Sec24-type; Sec23/Sec24 ... 270 1e-72
IMGA|Medtr8g011640.1 Zinc finger, Sec23/Sec24-type; Sec23/Sec24 ... 266 2e-71
IMGA|AC235673_6.1 Sec23/Sec24 trunk region; Sec23/Sec24 beta-san... 123 2e-28
>IMGA|AC235009_42.1 Zinc finger, Sec23/Sec24-type; Sec23/Sec24 trunk
region; Sec23/Sec24 helical region; Gelsolin region;
Sec23/Sec24 beta-sandwich AC235009.1 168398-171685 E
EGN_Mt090430 20090702
Length = 746
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 216/301 (71%), Positives = 256/301 (85%), Gaps = 1/301 (0%)
Query: 1 GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
G++VDS ++RTH D+ NG+A +H KSCSFY ++++RL DAS+VLDLFACSLDQVGVA
Sbjct: 288 GLVVDSDFRQSMRTHNDIFNGQARHHSKSCSFYRQIAKRLFDASVVLDLFACSLDQVGVA 347
Query: 61 ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGED-GSLKMYFDATIEVITTRDVKIC 119
EL+ P+ERSGGF++L E FESDQFRKCLRH+F +D G LKM FDATIE++TT DVKI
Sbjct: 348 ELREPIERSGGFVVLAESFESDQFRKCLRHLFKHDDDEGFLKMNFDATIEIVTTNDVKIS 407
Query: 120 GALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAHPGSAFFI 179
GALGPC+SL KKN VS+ E GQGGT WKL TLT++TCIAFFF+V D+Q P SAF +
Sbjct: 408 GALGPCMSLRKKNASVSETEVGQGGTCVWKLNTLTDRTCIAFFFQVSDKQTIQPSSAFMV 467
Query: 180 QFITRYRHGNMGIQKRVTTAARRWVGNKSAEITAGFDQEAAASVMARLAIHRAETCYARD 239
QFITRYR GNMG++KRVTTAARRWV N S +I AGFDQEAAASVMARLAI RAETC+ARD
Sbjct: 468 QFITRYRQGNMGLRKRVTTAARRWVANHSTDIAAGFDQEAAASVMARLAILRAETCHARD 527
Query: 240 VIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSPDETA 299
V+RWLDD LIRF SKFGDY+ EDPS+FRLS+NFSLYPQFM++LRRSQFIDV N++PDETA
Sbjct: 528 VVRWLDDTLIRFTSKFGDYVPEDPSSFRLSSNFSLYPQFMFHLRRSQFIDVSNTTPDETA 587
Query: 300 F 300
+
Sbjct: 588 Y 588
>IMGA|AC235006_31.1 Zinc finger, Sec23/Sec24-type; Sec23/Sec24 trunk
region; Sec23/Sec24 helical region; Gelsolin region;
Sec23/Sec24 beta-sandwich AC235006.1 134629-137916 E
EGN_Mt090430 20090702
Length = 746
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 216/301 (71%), Positives = 256/301 (85%), Gaps = 1/301 (0%)
Query: 1 GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
G++VDS ++RTH D+ NG+A +H KSCSFY ++++RL DAS+VLDLFACSLDQVGVA
Sbjct: 288 GLVVDSDFRQSMRTHNDIFNGQARHHSKSCSFYRQIAKRLFDASVVLDLFACSLDQVGVA 347
Query: 61 ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGED-GSLKMYFDATIEVITTRDVKIC 119
EL+ P+ERSGGF++L E FESDQFRKCLRH+F +D G LKM FDATIE++TT DVKI
Sbjct: 348 ELREPIERSGGFVVLAESFESDQFRKCLRHLFKHDDDEGFLKMNFDATIEIVTTNDVKIS 407
Query: 120 GALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAHPGSAFFI 179
GALGPC+SL KKN VS+ E GQGGT WKL TLT++TCIAFFF+V D+Q P SAF +
Sbjct: 408 GALGPCMSLRKKNASVSETEVGQGGTCVWKLNTLTDRTCIAFFFQVSDKQTIQPSSAFMV 467
Query: 180 QFITRYRHGNMGIQKRVTTAARRWVGNKSAEITAGFDQEAAASVMARLAIHRAETCYARD 239
QFITRYR GNMG++KRVTTAARRWV N S +I AGFDQEAAASVMARLAI RAETC+ARD
Sbjct: 468 QFITRYRQGNMGLRKRVTTAARRWVANHSTDIAAGFDQEAAASVMARLAILRAETCHARD 527
Query: 240 VIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSPDETA 299
V+RWLDD LIRF SKFGDY+ EDPS+FRLS+NFSLYPQFM++LRRSQFIDV N++PDETA
Sbjct: 528 VVRWLDDTLIRFTSKFGDYVPEDPSSFRLSSNFSLYPQFMFHLRRSQFIDVSNTTPDETA 587
Query: 300 F 300
+
Sbjct: 588 Y 588
>IMGA|Medtr3g104400.2 Zinc finger, Sec23/Sec24-type; Sec23/Sec24
trunk region; Sec23/Sec24 helical region; Gelsolin
region; Sec23/Sec24 beta-sandwich
chr03_pseudomolecule_IMGAG_V3 25939185-25945358 E
EGN_Mt090430 20090702
Length = 702
Score = 270 bits (691), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 193/306 (63%), Gaps = 7/306 (2%)
Query: 1 GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
G IV L++ +R+H+DL APY K+ FY L+++L VLDLFA +LDQVGVA
Sbjct: 307 GTIVSKELSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQLVSQGHVLDLFASALDQVGVA 366
Query: 61 ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
E+K VER+GG ++L E F F+ + +F GE SL + F+ T+E+ ++++KI G
Sbjct: 367 EMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQ-SLGLCFNGTLEINCSKEIKIQG 425
Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAH-PGSA--- 176
+GPC S+ KK V+D G+G T WK+ L TC+ F++ +++ PG
Sbjct: 426 IVGPCTSMEKKGPSVADTVIGEGNTTIWKMCGLDKSTCLTVMFDLSSSDRSNTPGGVNPQ 485
Query: 177 FFIQFITRYRHGNMGIQKRVTTAARRWVGN--KSAEITAGFDQEAAASVMARLAIHRAET 234
++QF+T Y+ + + R TT RRWV + S E+ GFDQE AA VMAR A + ET
Sbjct: 486 LYLQFLTSYQGPDGQLVLRATTVTRRWVDSAVSSEELVQGFDQETAAVVMARYASLKMET 545
Query: 235 CYARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSS 294
D RWLD LIR SKFGDY ++DPS+F L+ +FSL+PQFM+ LRRSQF+ VFN+S
Sbjct: 546 EETFDCTRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNS 605
Query: 295 PDETAF 300
PDETA+
Sbjct: 606 PDETAY 611
>IMGA|Medtr3g104400.1 Zinc finger, Sec23/Sec24-type; Sec23/Sec24
trunk region; Sec23/Sec24 helical region; Gelsolin
region; Sec23/Sec24 beta-sandwich
chr03_pseudomolecule_IMGAG_V3 25939185-25945358 E
EGN_Mt090430 20090702
Length = 771
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 193/306 (63%), Gaps = 7/306 (2%)
Query: 1 GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
G IV L++ +R+H+DL APY K+ FY L+++L VLDLFA +LDQVGVA
Sbjct: 307 GTIVSKELSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQLVSQGHVLDLFASALDQVGVA 366
Query: 61 ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
E+K VER+GG ++L E F F+ + +F GE SL + F+ T+E+ ++++KI G
Sbjct: 367 EMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQ-SLGLCFNGTLEINCSKEIKIQG 425
Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAH-PGSA--- 176
+GPC S+ KK V+D G+G T WK+ L TC+ F++ +++ PG
Sbjct: 426 IVGPCTSMEKKGPSVADTVIGEGNTTIWKMCGLDKSTCLTVMFDLSSSDRSNTPGGVNPQ 485
Query: 177 FFIQFITRYRHGNMGIQKRVTTAARRWVGN--KSAEITAGFDQEAAASVMARLAIHRAET 234
++QF+T Y+ + + R TT RRWV + S E+ GFDQE AA VMAR A + ET
Sbjct: 486 LYLQFLTSYQGPDGQLVLRATTVTRRWVDSAVSSEELVQGFDQETAAVVMARYASLKMET 545
Query: 235 CYARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSS 294
D RWLD LIR SKFGDY ++DPS+F L+ +FSL+PQFM+ LRRSQF+ VFN+S
Sbjct: 546 EETFDCTRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNS 605
Query: 295 PDETAF 300
PDETA+
Sbjct: 606 PDETAY 611
>IMGA|Medtr8g011640.1 Zinc finger, Sec23/Sec24-type; Sec23/Sec24
trunk region; Sec23/Sec24 helical region; Gelsolin
region; Sec23/Sec24 beta-sandwich
chr08_pseudomolecule_IMGAG_V3 1599218-1607684 E
EGN_Mt090430 20090702
Length = 763
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 190/305 (62%), Gaps = 8/305 (2%)
Query: 3 IVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVAEL 62
IV L+ IR+H+DL P++ K FY+ LS++L VLDLFAC+LDQVG+AEL
Sbjct: 302 IVSKQLSEPIRSHKDLDKDSVPHYHKCVKFYDGLSKQLVHQGHVLDLFACALDQVGIAEL 361
Query: 63 KAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICGAL 122
K VER+GG ++L E F F+ L+ +F G D L + + E+ ++D+K+ G +
Sbjct: 362 KTAVERTGGLVVLTESFGHPVFKDSLKRVFQSG-DYDLGLASNGIFEINCSKDIKVQGII 420
Query: 123 GPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFF-----EVGDEQKAHPGSAF 177
GPC SL KK+ L SD GQGGT AWK+ L T + FF E D + F
Sbjct: 421 GPCASLEKKSPLCSDVVIGQGGTSAWKMCGLDKSTSLCLFFDIVRKETPDATMQSTSNQF 480
Query: 178 FIQFITRYRHGNMGIQKRVTTAARRWVGNKSA--EITAGFDQEAAASVMARLAIHRAETC 235
+ QF+T Y++ + ++ RVTT +RRWV + ++ +GFDQEAAA VMAR + ET
Sbjct: 481 YFQFLTYYQNNSGQMRFRVTTLSRRWVAGPGSIQDLISGFDQEAAAIVMARQVSFKMETE 540
Query: 236 YARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSP 295
D IRWLD LI S+FGD+ +E PS+F LS S++PQFM++LRRSQF+ VFN+SP
Sbjct: 541 AEFDPIRWLDKALINLCSRFGDFQKETPSSFSLSPRLSIFPQFMFHLRRSQFVQVFNNSP 600
Query: 296 DETAF 300
DETA+
Sbjct: 601 DETAY 605
>IMGA|AC235673_6.1 Sec23/Sec24 trunk region; Sec23/Sec24
beta-sandwich AC235673.1 31856-29331 E EGN_Mt090430
20090702
Length = 181
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 51 ACSLDQVGVAELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEV 110
C+ VG+AELK VER+GG ++L E F F+ L+ +F G D L + + E+
Sbjct: 5 VCNHILVGIAELKTAVERTGGLVVLTESFGHPVFKDSLKRVFQSG-DYDLGLASNGIFEI 63
Query: 111 ITTRDVKICGALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFF-----EV 165
++D+K+ G +GPC SL KK+ L SD GQGGT AWK+ L T + FF E
Sbjct: 64 NCSKDIKVQGIIGPCASLEKKSPLCSDVVIGQGGTSAWKMCGLDKSTSLCLFFDIVRKET 123
Query: 166 GDEQKAHPGSAFFIQFITRYRHGNMGIQKRVTTAARRWVGNKSA--EITAGFDQEA 219
D + F+ QF+T Y++ + ++ RVTT +RRWV + ++ +GFDQEA
Sbjct: 124 PDATMQSTSNQFYFQFLTYYQNNSGQMRFRVTTLSRRWVAGPGSIQDLISGFDQEA 179