Jatropha Genome Database

JcCA0225801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0225801.10 + phase: 0 /partial
         (249 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g077510.1 Phosphoglycerate kinase; ; chr02_pseudomole...   410   e-115
IMGA|Medtr2g077490.2 Phosphoglycerate kinase; ; chr02_pseudomole...   389   e-109
IMGA|Medtr2g077490.1 Phosphoglycerate kinase; ; chr02_pseudomole...   381   e-106
IMGA|Medtr2g077480.1 Phosphoglycerate kinase; ; chr02_pseudomole...   381   e-106

>IMGA|Medtr2g077510.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17878258-17873114 E
           EGN_Mt090430 20090702
          Length = 479

 Score =  410 bits (1053), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/221 (91%), Positives = 218/221 (98%)

Query: 10  GRPKGVTPKFSLAPLVPRLSELLGIQVVKADDSIGPEVEKLVASLPEGGVLLLENVRFYK 69
           GRPKGVTPK+SLAPLVPRLSEL+GI+V+KA+DSIGPEVEKLVASLP+GGVLLLENVRFYK
Sbjct: 139 GRPKGVTPKYSLAPLVPRLSELIGIEVIKAEDSIGPEVEKLVASLPDGGVLLLENVRFYK 198

Query: 70  EEEKNDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVG 129
           EEEKNDPEHAKKLA+LADLYVNDAFGTAHRAHASTEGVTK+LKPSVAGFLLQKELDYLVG
Sbjct: 199 EEEKNDPEHAKKLAALADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVG 258

Query: 130 AVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGLSVGSSLVEE 189
           AVS+PKRPFAAIVGGSKVSSKIGVIESLLEKVD+LLLGGGMIFTFYKAQGL+VGSSLVEE
Sbjct: 259 AVSSPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLAVGSSLVEE 318

Query: 190 DKLNLATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKVC 230
           DKL LAT+L+ KAKAKGVSLLLPSDVVIADKFAPDANS++ 
Sbjct: 319 DKLELATTLIAKAKAKGVSLLLPSDVVIADKFAPDANSQIV 359


>IMGA|Medtr2g077490.2 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17870259-17866346 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  389 bits (1000), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/221 (88%), Positives = 209/221 (94%)

Query: 10  GRPKGVTPKFSLAPLVPRLSELLGIQVVKADDSIGPEVEKLVASLPEGGVLLLENVRFYK 69
           GRPKGVTPK+SL PLVPRLSELLG QV  ADDSIG EVEKLVA +PEGGVLLLENVRF+K
Sbjct: 66  GRPKGVTPKYSLKPLVPRLSELLGTQVKIADDSIGEEVEKLVAQIPEGGVLLLENVRFHK 125

Query: 70  EEEKNDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVG 129
           EEEKNDPE AKKLASLADLYVNDAFGTAHRAHASTEGV K+LKPSVAGFL+QKELDYLVG
Sbjct: 126 EEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVG 185

Query: 130 AVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGLSVGSSLVEE 189
           AVSNPK+PFAAIVGGSKVSSKIGVIESLLEKVD+LLLGGGMIFTFYKAQG +VGSSLVEE
Sbjct: 186 AVSNPKKPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGYAVGSSLVEE 245

Query: 190 DKLNLATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKVC 230
           DKL+LAT+L+EKAKAKGVSLLLP+DVVIADKFA DAN K+ 
Sbjct: 246 DKLDLATTLIEKAKAKGVSLLLPTDVVIADKFAADANDKIV 286


>IMGA|Medtr2g077490.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17870259-17859756 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/221 (86%), Positives = 207/221 (93%)

Query: 10  GRPKGVTPKFSLAPLVPRLSELLGIQVVKADDSIGPEVEKLVASLPEGGVLLLENVRFYK 69
           GRPKGVTPK+SL PLVPRLSELL  QV  +DD IG EVEKLVA +PEGGVLLLENVRF+K
Sbjct: 66  GRPKGVTPKYSLKPLVPRLSELLETQVKISDDCIGEEVEKLVAQIPEGGVLLLENVRFHK 125

Query: 70  EEEKNDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVG 129
           EEEKN+PE AKKLASLADLYVNDAFGTAHRAHASTEGV K+LKPSVAGFL+QKELDYLVG
Sbjct: 126 EEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVG 185

Query: 130 AVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGLSVGSSLVEE 189
           AVSNPK+PFAAIVGGSKVSSKIGVIESLLEKVD+LLLGGGMI+TFYKAQG S+GSSLVEE
Sbjct: 186 AVSNPKKPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIYTFYKAQGYSIGSSLVEE 245

Query: 190 DKLNLATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKVC 230
           DKL+LATSL+EKAKAKGVSLLLP+DVVIADKF+ DAN K+ 
Sbjct: 246 DKLDLATSLMEKAKAKGVSLLLPTDVVIADKFSADANDKIV 286


>IMGA|Medtr2g077480.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17863663-17859756 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/221 (86%), Positives = 207/221 (93%)

Query: 10  GRPKGVTPKFSLAPLVPRLSELLGIQVVKADDSIGPEVEKLVASLPEGGVLLLENVRFYK 69
           GRPKGVTPK+SL PLVPRLSELL  QV  +DD IG EVEKLVA +PEGGVLLLENVRF+K
Sbjct: 66  GRPKGVTPKYSLKPLVPRLSELLETQVKISDDCIGEEVEKLVAQIPEGGVLLLENVRFHK 125

Query: 70  EEEKNDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVG 129
           EEEKN+PE AKKLASLADLYVNDAFGTAHRAHASTEGV K+LKPSVAGFL+QKELDYLVG
Sbjct: 126 EEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVG 185

Query: 130 AVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGLSVGSSLVEE 189
           AVSNPK+PFAAIVGGSKVSSKIGVIESLLEKVD+LLLGGGMI+TFYKAQG S+GSSLVEE
Sbjct: 186 AVSNPKKPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIYTFYKAQGYSIGSSLVEE 245

Query: 190 DKLNLATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKVC 230
           DKL+LATSL+EKAKAKGVSLLLP+DVVIADKF+ DAN K+ 
Sbjct: 246 DKLDLATSLMEKAKAKGVSLLLPTDVVIADKFSADANDKIV 286