Jatropha Genome Database

JcCA0224821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0224821.10 + phase: 0 
         (164 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g106250.1 Glycoside hydrolase, family 32; Concanavali...    77   3e-15
IMGA|Medtr3g009930.1 Acid beta-fructofuranosidase AIV-18, relate...    65   2e-11

>IMGA|Medtr8g106250.1 Glycoside hydrolase, family 32; Concanavalin
           A-like lectin/glucanase; chr08_pseudomolecule_IMGAG_V3
           23736238-23741069 E EGN_Mt090430 20090702
          Length = 640

 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 6/66 (9%)

Query: 83  SQDTAKPEILRPVSRGVSAGVSQKANLISSH----SESPDYPWNNSMLSWQRTAFHFQPE 138
           S +  KP ++  VS  VSAGVS+K+N+  S      E+  +PWNN+MLSWQRT+FHFQPE
Sbjct: 63  SHEETKPNMV--VSPSVSAGVSEKSNVFLSGPNKVGETESFPWNNTMLSWQRTSFHFQPE 120

Query: 139 KNWMNG 144
           KNWMNG
Sbjct: 121 KNWMNG 126


>IMGA|Medtr3g009930.1 Acid beta-fructofuranosidase AIV-18, related
           chr03_pseudomolecule_IMGAG_V3 1602286-1602651 H
           EGN_Mt090430 20090702
          Length = 121

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 33/49 (67%), Gaps = 2/49 (4%)

Query: 97  RGVSAGVSQKANLISSHSESPDYPWNNSMLSWQRTAFHFQPEKNWMNGR 145
           RGV+ GVS K+N   SH     Y W   M SWQRTAFHFQP+ NWMNG+
Sbjct: 73  RGVAQGVSAKSN--PSHFNEVSYNWTKDMFSWQRTAFHFQPQNNWMNGK 119