Jatropha Genome Database

JcCA0224551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0224551.10 + phase: 0 
         (106 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g134050.1 hypothetical protein chr07_pseudomolecule_I...   165   6e-42

>IMGA|Medtr7g134050.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 31544322-31539684 F
           EGN_Mt090430 20090702
          Length = 212

 Score =  165 bits (417), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 79/106 (74%), Positives = 94/106 (88%)

Query: 1   MAEESPRAMRLMNFISEEQLDEAKKTRGERVDDGTAQRDRPLYEILKENKDKRDAEFNER 60
           M EES R +R+MNF+SEEQL E+K+TRGERV+DGTA RDRPL+EILKENKDK+DAEFNER
Sbjct: 1   MDEESGRPIRMMNFVSEEQLAESKRTRGERVEDGTAHRDRPLFEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLEKLEMSRREYEQQMAVDEAEQLRSFQVIF 106
           FKHRPPKALDEDETEFL+  E ++REYEQ++A +EA+QLRSFQ   
Sbjct: 61  FKHRPPKALDEDETEFLDNYESTKREYEQKLADEEAQQLRSFQAAI 106