Jatropha Genome Database
- JcCA0220511.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0220511.20 + phase: 1 /partial
(152 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g103260.1 Glyceraldehyde-3-phosphate dehydrogenase, t... 254 9e-69
IMGA|Medtr8g109660.1 Glyceraldehyde-3-phosphate dehydrogenase, t... 249 3e-67
IMGA|Medtr2g077990.2 Glyceraldehyde-3-phosphate dehydrogenase, t... 229 4e-61
IMGA|Medtr2g077990.1 Glyceraldehyde-3-phosphate dehydrogenase, t... 229 6e-61
IMGA|Medtr3g160060.1 Protein of unknown function CP12; Glycerald... 99 7e-22
IMGA|Medtr7g099600.1 Glyceraldehyde-3-phosphate dehydrogenase, t... 98 2e-21
>IMGA|Medtr3g103260.1 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr03_pseudomolecule_IMGAG_V3 25359130-25364058 E
EGN_Mt090430 20090702
Length = 340
Score = 254 bits (650), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/151 (83%), Positives = 131/151 (86%)
Query: 1 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
TQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPTVDVSVV
Sbjct: 189 TQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVV 248
Query: 61 DLTVRLXXXXXXXXXXXXXXXXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIAL 120
DLTVRL SEG +KGILGYTEDDVVSTDF+GD+RSSIFDAKAGIAL
Sbjct: 249 DLTVRLEKKATYEEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDSRSSIFDAKAGIAL 308
Query: 121 NDNFVKLVSWYDNEWGYSSRVIDLICHIASV 151
NDNFVKLVSWYDNEWGYS+RVIDLI HIASV
Sbjct: 309 NDNFVKLVSWYDNEWGYSTRVIDLIVHIASV 339
>IMGA|Medtr8g109660.1 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr08_pseudomolecule_IMGAG_V3 24655871-24652454 F
EGN_Mt090430 20090702
Length = 339
Score = 249 bits (637), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/149 (83%), Positives = 129/149 (86%)
Query: 1 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
TQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV
Sbjct: 188 TQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 247
Query: 61 DLTVRLXXXXXXXXXXXXXXXXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIAL 120
DLTVRL SEG++KGILGYTEDDVVSTDF+GD RSSIFDAKAGIAL
Sbjct: 248 DLTVRLEKPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDAKAGIAL 307
Query: 121 NDNFVKLVSWYDNEWGYSSRVIDLICHIA 149
NDNFVKLVSWYDNE GYS+RV+DLI HIA
Sbjct: 308 NDNFVKLVSWYDNELGYSTRVVDLIVHIA 336
>IMGA|Medtr2g077990.2 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr02_pseudomolecule_IMGAG_V3 18112574-18118811 E
EGN_Mt090430 20090702
Length = 392
Score = 229 bits (584), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/151 (73%), Positives = 124/151 (82%)
Query: 1 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
TQKTVDGPSMKDWRGGR A+ NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +VSVV
Sbjct: 238 TQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVV 297
Query: 61 DLTVRLXXXXXXXXXXXXXXXXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIAL 120
DLT RL SEG +KGILGYT++DVVS DF+GD+RSSIFDAKAGI L
Sbjct: 298 DLTCRLQKNASYEDVKAAIKLASEGQLKGILGYTDEDVVSNDFIGDSRSSIFDAKAGIGL 357
Query: 121 NDNFVKLVSWYDNEWGYSSRVIDLICHIASV 151
+ +FVKLVSWYDNEWGYS+RV+DL+ H+A V
Sbjct: 358 SKSFVKLVSWYDNEWGYSNRVLDLVGHMALV 388
>IMGA|Medtr2g077990.1 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr02_pseudomolecule_IMGAG_V3 18112574-18118811 E
EGN_Mt090430 20090702
Length = 418
Score = 229 bits (583), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 111/151 (73%), Positives = 124/151 (82%)
Query: 1 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
TQKTVDGPSMKDWRGGR A+ NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +VSVV
Sbjct: 264 TQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVV 323
Query: 61 DLTVRLXXXXXXXXXXXXXXXXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIAL 120
DLT RL SEG +KGILGYT++DVVS DF+GD+RSSIFDAKAGI L
Sbjct: 324 DLTCRLQKNASYEDVKAAIKLASEGQLKGILGYTDEDVVSNDFIGDSRSSIFDAKAGIGL 383
Query: 121 NDNFVKLVSWYDNEWGYSSRVIDLICHIASV 151
+ +FVKLVSWYDNEWGYS+RV+DL+ H+A V
Sbjct: 384 SKSFVKLVSWYDNEWGYSNRVLDLVGHMALV 414
>IMGA|Medtr3g160060.1 Protein of unknown function CP12;
Glyceraldehyde-3-phosphate dehydrogenase, type I
chr03_pseudomolecule_IMGAG_V3 42055909-42059863 F
EGN_Mt090430 20090702
Length = 451
Score = 99.4 bits (246), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 78/124 (62%), Gaps = 1/124 (0%)
Query: 22 NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLXXX-XXXXXXXXXXX 80
NI+P+STGAAKAV VLP L GKL G+A RVPT +VSVVDL V +
Sbjct: 291 NIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFR 350
Query: 81 XXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSR 140
+EG +KG+L + +VS DF + SS D+ + + D+ VK+V+WYDNEWGYS R
Sbjct: 351 KAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQR 410
Query: 141 VIDL 144
V+DL
Sbjct: 411 VVDL 414
>IMGA|Medtr7g099600.1 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr07_pseudomolecule_IMGAG_V3 22250718-22247269 F
EGN_Mt090430 20090702
Length = 404
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 78/123 (63%)
Query: 22 NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLXXXXXXXXXXXXXXX 81
NI+P+STGAAKAV VLP+L GKL G+A RVPT +VSVVDL V++
Sbjct: 273 NIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRD 332
Query: 82 XSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRV 141
+ + GIL ++ +VS DF + SS D+ + + D+ VK+++WYDNEWGYS RV
Sbjct: 333 SAAKELSGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRV 392
Query: 142 IDL 144
+DL
Sbjct: 393 VDL 395