Jatropha Genome Database

JcCA0216321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0216321.10 - phase: 0 
         (133 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g068360.1 Histone-like transcription factor CBF/NF-Y/...   216   2e-57
IMGA|Medtr7g120830.1 Transcription factor CBF/NF-Y/archaeal hist...   216   3e-57
IMGA|Medtr1g086990.1 Transcription factor CBF/NF-Y/archaeal hist...   203   2e-53
IMGA|Medtr5g103350.1 Histone-like transcription factor CBF/NF-Y/...   177   1e-45
IMGA|Medtr4g140740.1 Transcription factor CBF/NF-Y/archaeal hist...   172   3e-44
IMGA|Medtr4g143060.1 Transcription factor CBF/NF-Y/archaeal hist...   164   8e-42
IMGA|Medtr8g139040.1 Transcription factor CBF/NF-Y/archaeal hist...   150   2e-37
IMGA|Medtr1g046630.1 Transcription factor CBF/NF-Y/archaeal hist...   148   1e-36
IMGA|Medtr1g099630.1 Transcription factor CBF/NF-Y/archaeal hist...   123   3e-29
IMGA|Medtr5g103500.1 Histone-fold/TFIID-TAF/NF-Y chr05_pseudomol...    85   1e-17
IMGA|Medtr8g115740.1 Histone-fold/TFIID-TAF/NF-Y chr08_pseudomol...    73   4e-14

>IMGA|Medtr7g068360.1 Histone-like transcription factor
           CBF/NF-Y/archaeal histone, subunit A; Transcription
           factor CBF/NF-Y/archaeal histone
           chr07_pseudomolecule_IMGAG_V3 13992380-13994623 E
           EGN_Mt090430 20090702
          Length = 187

 Score =  216 bits (551), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 101/117 (86%), Positives = 109/117 (93%), Gaps = 1/117 (0%)

Query: 1   MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
           M+E P SP GGSHESG E SP S +REQDR+LPIANISRIMKKALPANGKIAKDAK+TVQ
Sbjct: 1   MSETPASPGGGSHESG-EHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQ 59

Query: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           ECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PLK+YL RYRE+
Sbjct: 60  ECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREM 116


>IMGA|Medtr7g120830.1 Transcription factor CBF/NF-Y/archaeal histone
           chr07_pseudomolecule_IMGAG_V3 28310079-28318474 H
           EGN_Mt090430 20090702
          Length = 227

 Score =  216 bits (550), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 101/117 (86%), Positives = 109/117 (93%), Gaps = 1/117 (0%)

Query: 1   MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
           M+E P SP GGSHESG E SP S +REQDR+LPIANISRIMKKALPANGKIAKDAK+TVQ
Sbjct: 68  MSETPASPGGGSHESG-EHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQ 126

Query: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           ECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PLK+YL RYRE+
Sbjct: 127 ECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREM 183


>IMGA|Medtr1g086990.1 Transcription factor CBF/NF-Y/archaeal
           histone; Histone-fold/TFIID-TAF/NF-Y
           chr01_pseudomolecule_IMGAG_V3 17393633-17389739 E
           EGN_Mt090430 20090702
          Length = 174

 Score =  203 bits (516), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 98/108 (90%), Positives = 102/108 (94%), Gaps = 3/108 (2%)

Query: 12  SHESGGEQSPH---SGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFIS 68
           SHESGGEQSP    S  REQDR+LPIANISRIMKKALP+NGKIAKDAKDT+QECVSEFIS
Sbjct: 11  SHESGGEQSPRGSSSASREQDRFLPIANISRIMKKALPSNGKIAKDAKDTMQECVSEFIS 70

Query: 69  FITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
           FITSEAS+KCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRE
Sbjct: 71  FITSEASEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRE 118


>IMGA|Medtr5g103350.1 Histone-like transcription factor
           CBF/NF-Y/archaeal histone, subunit A; Transcription
           factor CBF/NF-Y/archaeal histone
           chr05_pseudomolecule_IMGAG_V3 41407023-41408022 F
           EGN_Mt090430 20090702
          Length = 184

 Score =  177 bits (450), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 84/117 (71%), Positives = 97/117 (82%), Gaps = 4/117 (3%)

Query: 1   MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
           MA++     G  +    E SP    REQDR+LPIAN+SRIMKKALPAN KI+KDAK+TVQ
Sbjct: 1   MADSDNESGGAPNAGNSELSP----REQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 56

Query: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           ECVSEFISFIT EASDKCQ+EKRKTINGDDLLWAM TLGFE+Y+EPLK+YL R+RE+
Sbjct: 57  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREI 113


>IMGA|Medtr4g140740.1 Transcription factor CBF/NF-Y/archaeal
           histone; Histone-fold/TFIID-TAF/NF-Y
           chr04_pseudomolecule_IMGAG_V3 34593832-34594591 E
           EGN_Mt090430 20090702
          Length = 201

 Score =  172 bits (437), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/114 (71%), Positives = 94/114 (82%), Gaps = 2/114 (1%)

Query: 4   NPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECV 63
           N TSP G    + G  S     +EQDR+LPIAN+SRIMK+ALPAN KI+K+AK+TVQECV
Sbjct: 7   NQTSPVGSP--TSGNISDSLSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECV 64

Query: 64  SEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           SEFISFIT EASDKCQ+EKRKTINGDDLLWAM TLGFE+Y+ PLKVYL  YRE+
Sbjct: 65  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNNYREI 118


>IMGA|Medtr4g143060.1 Transcription factor CBF/NF-Y/archaeal
           histone; Histone-fold/TFIID-TAF/NF-Y
           chr04_pseudomolecule_IMGAG_V3 35761704-35762348 H
           EGN_Mt090430 20090702
          Length = 214

 Score =  164 bits (416), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 70/92 (76%), Positives = 86/92 (93%)

Query: 26  REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKT 85
           +EQDR+LPIAN+ RIMKK +PANGKI+KDAK+TVQECVSEFISF+T EASDKCQ+EKRKT
Sbjct: 39  KEQDRFLPIANVGRIMKKVIPANGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 98

Query: 86  INGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           INGDD++WA+ TLGFE+Y+EPLK YL +YR++
Sbjct: 99  INGDDIIWAITTLGFEEYVEPLKCYLQKYRDI 130


>IMGA|Medtr8g139040.1 Transcription factor CBF/NF-Y/archaeal
           histone; Histone-fold/TFIID-TAF/NF-Y
           chr08_pseudomolecule_IMGAG_V3 33818172-33819227 E
           EGN_Mt090430 20090702
          Length = 128

 Score =  150 bits (379), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 88/109 (80%), Gaps = 2/109 (1%)

Query: 9   AGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFIS 68
            GGS  S  E      ++EQDR LPIAN+ RIMK+ LP N KI+K++K+T+QECVSEFIS
Sbjct: 5   VGGSSFSNDENG--GIIKEQDRLLPIANVGRIMKQILPQNAKISKESKETMQECVSEFIS 62

Query: 69  FITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           F+TSEAS+KC+KE+RKT+NGDD+ WA+ TLGF+DY EP++ YL RYRE+
Sbjct: 63  FVTSEASEKCRKERRKTVNGDDICWALGTLGFDDYAEPMRRYLHRYREL 111


>IMGA|Medtr1g046630.1 Transcription factor CBF/NF-Y/archaeal
           histone; Histone-fold/TFIID-TAF/NF-Y
           chr01_pseudomolecule_IMGAG_V3 10947584-10947012 H
           EGN_Mt090430 20090702
          Length = 190

 Score =  148 bits (373), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 60/94 (63%), Positives = 82/94 (87%)

Query: 23  SGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEK 82
           +G+REQD+Y+PIAN+ RIM++ LP++ KI+ DAK+T+QECVSE+ISFITSEA+D+CQ+E+
Sbjct: 2   AGIREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITSEANDRCQREQ 61

Query: 83  RKTINGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
           RKT+  +D+LWAM  LGF+DY+ PL  YL RYRE
Sbjct: 62  RKTVTAEDILWAMGKLGFDDYVHPLTFYLQRYRE 95


>IMGA|Medtr1g099630.1 Transcription factor CBF/NF-Y/archaeal
           histone; Histone-fold/TFIID-TAF/NF-Y
           chr01_pseudomolecule_IMGAG_V3 20433180-20432589 E
           EGN_Mt090430 20090702
          Length = 127

 Score =  123 bits (309), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 71/91 (78%)

Query: 27  EQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTI 86
           E D+ LPIAN+ RIMK+ LP N KI+K++K  +QEC +EFISF+T EASDKC KE RKT+
Sbjct: 4   EGDKTLPIANVGRIMKQNLPPNAKISKESKQLMQECATEFISFVTGEASDKCHKENRKTV 63

Query: 87  NGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           NGDD+ WA+ +LGF++Y E +  YL ++R+ 
Sbjct: 64  NGDDICWALCSLGFDNYAEAIGRYLYKFRQA 94


>IMGA|Medtr5g103500.1 Histone-fold/TFIID-TAF/NF-Y
           chr05_pseudomolecule_IMGAG_V3 41467809-41470101 E
           EGN_Mt090430 20090702
          Length = 195

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 67/115 (58%)

Query: 2   AENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQE 61
           ++ P  P   S + G + +      E  R  PIAN+ R+MKKALP + KI  ++K+ + +
Sbjct: 3   SDGPDHPRESSSKDGVQPASSRVQEEFSRAFPIANVHRLMKKALPRHAKITDESKEIMVK 62

Query: 62  CVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
             +EFISF+T+EA+  C+ + R TI  +DLL  M  LGF+DY +    Y+  +R 
Sbjct: 63  YAAEFISFVTAEANHYCKLDCRTTITAEDLLATMQKLGFDDYAQYSFRYIQLFRH 117


>IMGA|Medtr8g115740.1 Histone-fold/TFIID-TAF/NF-Y
           chr08_pseudomolecule_IMGAG_V3 26066308-26070822 E
           EGN_Mt090430 20090702
          Length = 156

 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 61/89 (68%), Gaps = 2/89 (2%)

Query: 24  GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKR 83
           G  ++D  LP A +++I+K+ LP + ++A+D +D + EC  EFI+ I+SE+++ C +E +
Sbjct: 8   GKSKEDASLPKATMTKIIKEMLPQDVRVARDTQDLLIECCVEFINLISSESNEVCSREDK 67

Query: 84  KTINGDDLLWAMATLGFEDYIEPLKVYLA 112
           +TI  + +L A+  LGF +YIE  +VY A
Sbjct: 68  RTIAPEHVLKALQVLGFGEYIE--EVYAA 94