Jatropha Genome Database
- JcCA0206791.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0206791.10 + phase: 0 /partial
(273 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g089200.1 Leucine-rich repeat 2 chr05_pseudomolecule_... 404 e-113
IMGA|Medtr3g093160.1 Leucine-rich repeat, cysteine-containing su... 388 e-108
IMGA|Medtr8g074230.1 Leucine-rich repeat, cysteine-containing su... 217 6e-57
IMGA|Medtr4g124940.1 Cyclin-like F-box chr04_pseudomolecule_IMGA... 131 3e-31
IMGA|Medtr7g096650.1 Cyclin-like F-box chr07_pseudomolecule_IMGA... 131 4e-31
IMGA|Medtr5g074580.1 Leucine-rich repeat 2 chr05_pseudomolecule_... 127 6e-30
IMGA|Medtr3g148840.1 Protein AUXIN SIGNALING F-BOX 3, related ch... 124 4e-29
IMGA|Medtr1g121930.1 hypothetical protein chr01_pseudomolecule_I... 62 4e-10
IMGA|Medtr8g120510.1 Cyclin-like F-box chr08_pseudomolecule_IMGA... 52 2e-07
IMGA|Medtr2g026110.1 Cyclin-like F-box chr02_pseudomolecule_IMGA... 49 4e-06
>IMGA|Medtr5g089200.1 Leucine-rich repeat 2
chr05_pseudomolecule_IMGAG_V3 34621888-34616774 E
EGN_Mt090430 20090702
Length = 587
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/269 (76%), Positives = 226/269 (84%), Gaps = 3/269 (1%)
Query: 1 ARNVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMA 60
+RNVIGDRGLEVLA CK+LKRLRIERG D+QGMED +GVVSQRGLIAL+ GC ELEYMA
Sbjct: 311 SRNVIGDRGLEVLARCCKKLKRLRIERGDDDQGMEDVDGVVSQRGLIALSLGCPELEYMA 370
Query: 61 VYVSDITNAALEHIGACLKNLNDFRLVLLDREERITDLPLDNGVRALLRHCEKLRRFALY 120
VYVSDITN +LEHI LKNL DFRLVLLDREE+ITDLPLDNGVRALL C+KLRRFALY
Sbjct: 371 VYVSDITNESLEHISTHLKNLCDFRLVLLDREEKITDLPLDNGVRALLTGCKKLRRFALY 430
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCC-FTES 179
LR GGLTDVGLGYIG+YS NVRW+LLGYVGE+D GLL FSKGCPSLQKLEMRGC F+E
Sbjct: 431 LRPGGLTDVGLGYIGKYSPNVRWILLGYVGETDAGLLEFSKGCPSLQKLEMRGCSFFSEH 490
Query: 180 ALARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVV 239
ALA A +LTSLRYLWVQGY AS+ G DLL MARP+WNIE+IP R++ + NQ VV
Sbjct: 491 ALAVAATRLTSLRYLWVQGYGASA-SGHDLLAMARPYWNIEVIPSRRMVVNNQQDRRPVV 549
Query: 240 -EQPAHILAYYSLAGPRTDFPECVLPLDP 267
E PAHILAYYSLAGPR D P+ V PL P
Sbjct: 550 IEHPAHILAYYSLAGPRADCPDTVRPLHP 578
>IMGA|Medtr3g093160.1 Leucine-rich repeat, cysteine-containing
subtype chr03_pseudomolecule_IMGAG_V3 22073407-22070105
E EGN_Mt090430 20090702
Length = 601
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/276 (75%), Positives = 227/276 (82%), Gaps = 4/276 (1%)
Query: 1 ARNVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMA 60
RNVIGDRGL +L CK+LKRLRIERG D+QG+EDEEG VS RGLIAL+QGC ELEY+A
Sbjct: 327 TRNVIGDRGLVILGHCCKKLKRLRIERGDDDQGLEDEEGTVSHRGLIALSQGCTELEYLA 386
Query: 61 VYVSDITNAALEHIGACLKNLNDFRLVLLDREERITDLPLDNGVRALLRHCEKLRRFALY 120
VYVSDITNA+LEHIG LK L DFRLVLLD ERI+DLPLDNGVRALL C+KL RFALY
Sbjct: 387 VYVSDITNASLEHIGTHLKKLCDFRLVLLDHAERISDLPLDNGVRALLMGCDKLVRFALY 446
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCC-FTES 179
LR+GGLTDVGLGYIGQ+SQNVRWMLLGYVGE+D GLL FS GCPSLQKLEMRGC F+E
Sbjct: 447 LRRGGLTDVGLGYIGQHSQNVRWMLLGYVGETDTGLLEFSNGCPSLQKLEMRGCSFFSEH 506
Query: 180 ALARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGED--A 237
ALA A +LTSLRYLWVQGY ASS G LL MARPFWNIELIP R+VA+ N V D
Sbjct: 507 ALAIAATRLTSLRYLWVQGYGASSS-GSGLLAMARPFWNIELIPSRQVAVNNNVNPDEPQ 565
Query: 238 VVEQPAHILAYYSLAGPRTDFPECVLPLDPMRLVSA 273
VV PAHILAYYSLAG R+DFP V+PL+P+ V A
Sbjct: 566 VVTHPAHILAYYSLAGLRSDFPNSVVPLNPVAYVDA 601
>IMGA|Medtr8g074230.1 Leucine-rich repeat, cysteine-containing
subtype chr08_pseudomolecule_IMGAG_V3 14712347-14710032
H EGN_Mt090430 20090702
Length = 557
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 125/262 (47%), Positives = 155/262 (59%), Gaps = 38/262 (14%)
Query: 1 ARNVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMA 60
+ +VIG++GL L C +LKRLRIE + + EDEE V+QRGLI ++ GC ELEY++
Sbjct: 322 SMDVIGNKGLIELGQYCTKLKRLRIE--TENERREDEEARVTQRGLIEISNGCPELEYIS 379
Query: 61 VYVSDITNAALEHIGACLKNLNDFRLVLLDREERITDLPLDNGVRALLRHCEKLRRFALY 120
V VS+ITN AL HI LKNL ++ LL+ C KLRRFALY
Sbjct: 380 VNVSNITNQALIHISTHLKNL----------------------LKELLQGCVKLRRFALY 417
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGC-CFTES 179
LR GGLTD L YIG++ N++W+LLGY G++D+GLL FS+GC SLQKLE+RGC F+E
Sbjct: 418 LRSGGLTDKDLEYIGRFGVNLKWILLGYCGQTDKGLLDFSQGCRSLQKLEIRGCKFFSEV 477
Query: 180 ALARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVV 239
L A L SLRYLWVQ Y S PG ARP+W E+I + NQ
Sbjct: 478 VLGVAAYNLKSLRYLWVQSYSPSFPPGSGFRFSARPYWFTEMISTSQDEDNNQ------- 530
Query: 240 EQPAHILAYYS-LAGPRTDFPE 260
L YYS L GPR D P
Sbjct: 531 -----FLGYYSILGGPRADIPH 547
>IMGA|Medtr4g124940.1 Cyclin-like F-box
chr04_pseudomolecule_IMGAG_V3 29352485-29348732 F
EGN_Mt090430 20090702
Length = 586
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 139/268 (51%), Gaps = 24/268 (8%)
Query: 3 NVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGV---VSQRGLIALAQGCLELEYM 59
+ + D+GLE + S C L+ LR+ G EEG V++ G IA+++GC +L Y+
Sbjct: 338 DTVEDKGLEAVGSYCPLLEELRVFPGD-----PFEEGAAHGVTESGFIAVSEGCRKLHYV 392
Query: 60 AVYVSDITNAALEHIGACLKNLNDFRLVLLD--REERITDLPLDNGVRALLRHCEKLRRF 117
+ +TNAA+ + + FRL ++ + + T P+D A+++ C KL+R
Sbjct: 393 LYFCRQMTNAAVATVVENCPDFTHFRLCIMTPGQPDYQTGEPMDEAFGAVVKTCTKLQRL 452
Query: 118 ALYLRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFT 177
A+ G LTD+ YIG+Y++N+ + + + G SD + GCP L+KLE+R F
Sbjct: 453 AV---SGSLTDLTFEYIGKYAKNLETLSVAFAGSSDWAMQCVLVGCPKLRKLEIRDSPFG 509
Query: 178 ESALARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDA 237
+AL + S+R LW+ K ++ G LL RP N+E+ M + G+D+
Sbjct: 510 NAALLSGFDKYESMRSLWMSDCKV-TMNGCRLLAQERPRLNVEV-------MQEEGGDDS 561
Query: 238 VVEQPAHILAYYSLAGPRTDFPECVLPL 265
Q + Y S+AGPR D P VL L
Sbjct: 562 ---QAGKLYVYRSVAGPRRDAPPFVLTL 586
>IMGA|Medtr7g096650.1 Cyclin-like F-box
chr07_pseudomolecule_IMGAG_V3 21663069-21659617 E
EGN_Mt090430 20090702
Length = 571
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 138/266 (51%), Gaps = 20/266 (7%)
Query: 5 IGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVYVS 64
IGD GL V+AS+CK L+ LR+ A + V+++GL+A++ GC +L + +
Sbjct: 321 IGDLGLGVVASTCKELQELRVFPSAPF----GNQAAVTEKGLVAISMGCPKLHSLLYFCH 376
Query: 65 DITNAALEHIGACLKNLNDFRLVLLDREERITDL--PLDNGVRALLRHCEKLRRFALYLR 122
+TNAAL + N FRL +LD + D PLD G A+++ C++LRR +L
Sbjct: 377 QMTNAALIAVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCKRLRRLSL--- 433
Query: 123 QGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESALA 182
G LTD YIG Y++ + + + + GESD+G+L GC ++KLE+R C F ++AL
Sbjct: 434 SGQLTDQVFLYIGMYAEQLEMLSIAFAGESDKGMLYVLNGCKKIRKLEIRDCPFGDTALL 493
Query: 183 RAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVVEQP 242
+ + ++R LW+ + ++ L P N+E+ + A D VE
Sbjct: 494 TDIGKYETMRSLWMSSCEV-TVEACKTLAKKMPRLNVEIFSESEQA-------DCYVEDG 545
Query: 243 AHILAYY---SLAGPRTDFPECVLPL 265
+ Y ++AG R D P+ V L
Sbjct: 546 QRVEKMYLYRTVAGKREDAPDYVWTL 571
>IMGA|Medtr5g074580.1 Leucine-rich repeat 2
chr05_pseudomolecule_IMGAG_V3 26963413-26966403 E
EGN_Mt090430 20090702
Length = 617
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 138/260 (53%), Gaps = 19/260 (7%)
Query: 5 IGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVYVS 64
I D GL+ +A++CK L+ LR+ E+ EG VS+ G A++QGC +LE + +
Sbjct: 371 ICDEGLQAVAATCKDLRELRV---FPVDAREETEGPVSEVGFEAISQGCRKLESILFFCQ 427
Query: 65 DITNAALEHIGACLKNLNDFRLVLLD--REERITDLPLDNGVRALLRHCEKLRRFALYLR 122
+TNAA+ + +L FRL ++ R + +T P+D G A++ +C+KL R A+
Sbjct: 428 TMTNAAVIAMSKNCPDLVVFRLCIIGVYRPDAVTQEPMDEGFGAIVMNCKKLTRLAV--- 484
Query: 123 QGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESALA 182
G LTD YIG+Y + +R + + + G++D L +GCP+LQKLE+R F + AL
Sbjct: 485 SGLLTDRCFEYIGRYGKLIRTLSVAFAGDTDNSLKYVLEGCPNLQKLEIRDSPFGDGALR 544
Query: 183 RAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVVEQP 242
+ ++R+LW+ K + ++ + A P +E+I V VN +
Sbjct: 545 SGLHHYYNMRFLWMSSCKLTRQACQE-VARALPQMVMEVIN-NDVEAVNDI--------- 593
Query: 243 AHILAYYSLAGPRTDFPECV 262
+ Y SL GPR D PE V
Sbjct: 594 EILYMYRSLDGPRDDAPENV 613
>IMGA|Medtr3g148840.1 Protein AUXIN SIGNALING F-BOX 3, related
chr03_pseudomolecule_IMGAG_V3 38779268-38775322 E
EGN_Mt090430 20090702
Length = 594
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 143/266 (53%), Gaps = 19/266 (7%)
Query: 3 NVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVY 62
+ I D GL+V+A +CK L+ LR+ +G+E G VS+ G A++QGC +L+ + +
Sbjct: 346 DAIFDEGLQVVAETCKDLRELRVFPLHAREGVE---GPVSEVGFEAISQGCRKLQSILFF 402
Query: 63 VSDITNAALEHIGACLKNLNDFRLVLLD--REERITDLPLDNGVRALLRHCEKLRRFALY 120
+ +TNAA+ + +L FRL ++ R + +T P+D G A++ +C+KL R A+
Sbjct: 403 CTRMTNAAVVAMSHNCPDLVVFRLCIIGQYRPDALTQQPMDEGFGAIVMNCKKLTRLAV- 461
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESA 180
G LTD+ YIG Y + +R + + + G++D GL GC +LQKLE+R F + A
Sbjct: 462 --SGLLTDLAFCYIGLYGKMIRTLSVAFAGDTDSGLKYVLDGCYNLQKLEIRDSPFGDGA 519
Query: 181 LARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVVE 240
L + ++R+LW+ K + +++ AR +P R V V ED V+
Sbjct: 520 LRSGLHHFYNMRFLWMSSCKLTRQACQEV---AR------TLP-RLVLEVINTDEDT-VD 568
Query: 241 QPAHILAYYSLAGPRTDFPECVLPLD 266
+ Y SL PR+D P+ V L+
Sbjct: 569 DFDILYMYRSLDKPRSDAPKVVTILN 594
>IMGA|Medtr1g121930.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 26679867-26679647 F
EGN_Mt090430 20090702
Length = 66
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 128 DVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGC-CFTESALARAVM 186
+V L Y+GQY NV+W+LLGY ES G+L SKG SL+K+E R C CF + A ++
Sbjct: 5 NVCLSYVGQYGHNVKWILLGYTVESATGILEVSKGYSSLRKVETRECYCFCKHVYALTIV 64
>IMGA|Medtr8g120510.1 Cyclin-like F-box
chr08_pseudomolecule_IMGAG_V3 27575566-27578422 E
EGN_Mt090430 20090702
Length = 633
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 48/233 (20%)
Query: 5 IGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAV-YV 63
IGD+GL +A C L+ L + + ++ +GLIA+A+GC L + +
Sbjct: 193 IGDKGLCEIAKGCHMLETLDLSHSSS----------ITNKGLIAIAEGCPNLTTLNIESC 242
Query: 64 SDITNAALEHIGACLKNLNDFRLVLLDREERITDLPL--DNGVRALLRHCEKLRRFALYL 121
S I N L+ + L+ I D PL D+GV +LL L + L +
Sbjct: 243 SMIGNEGLQTVAKLCPKLHSI---------CIKDCPLVGDHGVSSLLSLASNLSKVKLQI 293
Query: 122 RQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESAL 181
+TD L IG Y + V ++L LQ + RG C +
Sbjct: 294 LN--ITDFSLAVIGHYGKAVTNLVL-----------------SGLQNVSERGFCVM--GV 332
Query: 182 ARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVG 234
A+ + +L SL QG +SI M + F +++ + LR+ + V+ G
Sbjct: 333 AQGLQKLMSLTITSCQGVTDASIE-----AMGKGFPHLKQMCLRRCSFVSDFG 380
>IMGA|Medtr2g026110.1 Cyclin-like F-box
chr02_pseudomolecule_IMGAG_V3 7083652-7076263 E
EGN_Mt090430 20090702
Length = 610
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 22/195 (11%)
Query: 7 DRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVY-VSD 65
D+GL + + CK+LK L + + +S +GL A+A GC EL ++ V +
Sbjct: 309 DKGLRAIGNGCKKLKNLTLS----------DCYFLSDKGLEAIATGCKELTHLEVNGCHN 358
Query: 66 ITNAALEHIGACLKNLNDFRLVLLDREERITDLPLDNGVRALLRHCEKLRRFALYLRQ-G 124
I L+ +G +L++ L+ +RI DL G+ + + C+ L+ AL+L
Sbjct: 359 IGTLGLDSVGKSCLHLSELALLYC---QRIGDL----GLLQVGKGCQFLQ--ALHLVDCS 409
Query: 125 GLTDVGLGYIGQYSQNVRWMLLGYVGE-SDEGLLAFSKGCPSLQKLEMRGCCFTESALAR 183
+ D + I +N++ + + E ++G++A + C SL L +R C
Sbjct: 410 SIGDEAMCGIATGCRNLKKLHIRRCYEIGNKGIIAVGENCKSLTDLSIRFCDRVGDGALI 469
Query: 184 AVMQLTSLRYLWVQG 198
A+ + SL YL V G
Sbjct: 470 AIAEGCSLHYLNVSG 484