Jatropha Genome Database

JcCA0206521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0206521.10 + phase: 0 
         (251 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g024670.1 Amino acid transporter, transmembrane chr03...   461   e-130
IMGA|Medtr5g089600.1 Tachykinin/Neurokinin like chr05_pseudomole...   429   e-121
IMGA|Medtr3g097960.1 Amino acid transporter, transmembrane chr03...   375   e-105
IMGA|Medtr4g073560.1 amino acid transporter family protein, puta...    48   5e-06

>IMGA|Medtr3g024670.1 Amino acid transporter, transmembrane
           chr03_pseudomolecule_IMGAG_V3 6264866-6272858 E
           EGN_Mt090430 20090702
          Length = 484

 Score =  461 bits (1186), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/255 (87%), Positives = 240/255 (94%), Gaps = 6/255 (2%)

Query: 1   MLPQKQAEEAIVPNFSETENE----ARQEELEDEHSMFNVKSFLWHGGSAWDAWFSCASN 56
           MLPQKQ EEAIV +F+ET+ +     R+EE+ED HS F+VK+FLWHGGS WDAWFSCASN
Sbjct: 1   MLPQKQGEEAIVSSFNETDQQEGVVGREEEVED-HS-FSVKNFLWHGGSVWDAWFSCASN 58

Query: 57  QVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYLISVLYIEYRTRKEKENVSFKNH 116
           QVAQVLLTLPYSFSQLGMLSGIL Q+FYG++GSWTAYLISVLY+EYR+RKEKENV+FKNH
Sbjct: 59  QVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYRSRKEKENVNFKNH 118

Query: 117 VIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFG 176
           VIQWFEVLDGLLGPYWKA GLAFNCTFLLFGSVIQLIACASNIYYIND+LDKRTWTYIFG
Sbjct: 119 VIQWFEVLDGLLGPYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFG 178

Query: 177 ACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGVTHTGPKKLVLYFTG 236
           ACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIA++VHGQ E VTHTGPKKLVLYFTG
Sbjct: 179 ACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASIVHGQAENVTHTGPKKLVLYFTG 238

Query: 237 ATNILYTFGGHAVTV 251
           ATNILYTFGGHAVTV
Sbjct: 239 ATNILYTFGGHAVTV 253


>IMGA|Medtr5g089600.1 Tachykinin/Neurokinin like
           chr05_pseudomolecule_IMGAG_V3 34843281-34849584 E
           EGN_Mt090430 20090702
          Length = 479

 Score =  429 bits (1103), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/252 (82%), Positives = 228/252 (90%), Gaps = 1/252 (0%)

Query: 1   MLPQKQAEEAIVPNFSETENEARQEELEDEHSMFN-VKSFLWHGGSAWDAWFSCASNQVA 59
           ML +KQ EE ++ + +ET     + E E   S  +  K+FLWHGGS +DAWFSCASNQVA
Sbjct: 1   MLSEKQGEETMMSSLNETIELNEEREEEKGASPGSGFKNFLWHGGSVYDAWFSCASNQVA 60

Query: 60  QVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYLISVLYIEYRTRKEKENVSFKNHVIQ 119
           QVLLTLPYSFSQLGM+SGI+FQ+FYGLMGSWTAYLIS+LY+EYR+RKEKENVSFKNHVIQ
Sbjct: 61  QVLLTLPYSFSQLGMISGIIFQVFYGLMGSWTAYLISILYVEYRSRKEKENVSFKNHVIQ 120

Query: 120 WFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACC 179
           WFEVL+GLLGPYWKA GLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACC
Sbjct: 121 WFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACC 180

Query: 180 ATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGVTHTGPKKLVLYFTGATN 239
           ATTVFIPSFHNYRIWSFLGLGMTTYTAWY+TIAA+VHGQVE V H+GPKK+V YFTGATN
Sbjct: 181 ATTVFIPSFHNYRIWSFLGLGMTTYTAWYMTIAAIVHGQVENVVHSGPKKMVWYFTGATN 240

Query: 240 ILYTFGGHAVTV 251
           ILYTFGGHAVTV
Sbjct: 241 ILYTFGGHAVTV 252


>IMGA|Medtr3g097960.1 Amino acid transporter, transmembrane
           chr03_pseudomolecule_IMGAG_V3 23602008-23599104 E
           EGN_Mt090430 20090702
          Length = 453

 Score =  375 bits (964), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/250 (73%), Positives = 204/250 (81%), Gaps = 16/250 (6%)

Query: 2   LPQKQAEEAIVPNFSETENEARQEELEDEHSMFNVKSFLWHGGSAWDAWFSCASNQVAQV 61
           +  ++ E  +  N+ E E    +EE   + +   +  F WHGGS            VAQV
Sbjct: 1   MTSEKVETVVAGNYLEME----REEEGSKSTTGKLSKFFWHGGS------------VAQV 44

Query: 62  LLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYLISVLYIEYRTRKEKENVSFKNHVIQWF 121
           LLTLPYSFSQLGMLSGILFQIFYGLMGSWTAY+ISVLY+EYRTRKE+E V F+NHVIQWF
Sbjct: 45  LLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYIISVLYVEYRTRKEREKVDFRNHVIQWF 104

Query: 122 EVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCAT 181
           EVLDGLLG +W+  GL FNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCAT
Sbjct: 105 EVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCAT 164

Query: 182 TVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGVTHTGPKKLVLYFTGATNIL 241
           TVFIPSFHNYRIWSFLGL MTTYTAWY+TIA+++HGQ E V H+GP KLVLYFTGATNIL
Sbjct: 165 TVFIPSFHNYRIWSFLGLVMTTYTAWYMTIASILHGQAEDVKHSGPTKLVLYFTGATNIL 224

Query: 242 YTFGGHAVTV 251
           YTFGGHAVTV
Sbjct: 225 YTFGGHAVTV 234


>IMGA|Medtr4g073560.1 amino acid transporter family protein,
           putative chr04_pseudomolecule_IMGAG_V3 14619089-14624759
           E EGN_Mt090430 20090702
          Length = 462

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 35/207 (16%)

Query: 1   MLPQKQAEEAIVPNFSETENEARQ----EELEDEHSMFNVKSFLWHGGSAWDAWFSCASN 56
           +LP   AE       SE +N + Q    +   D  ++F +KS     GS     +   ++
Sbjct: 4   LLPSSTAEH----EKSEKQNSSLQIDEHQRDVDAGALFVLKS----KGSWVHCGYHLTTS 55

Query: 57  QVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYLISVLYIEYRTRKEKENVSFKNH 116
            VA  LL+LPY+F+ LG  +GI F +   ++  ++  L+S        R  +      N 
Sbjct: 56  IVAPPLLSLPYAFTLLGWTAGIFFLVIGAMVTFYSYNLLS--------RVLEHQAQLGNR 107

Query: 117 VIQWFEVLDGLLGPYWK-----------AAGLAFNCTFLLFGSVIQLIACASNIYYINDH 165
            +++ ++   +LGP W              G    CT LL G  ++ +   SN    N  
Sbjct: 108 QLRFRDMARDILGPRWGRYFVGPIQFAVCYGAVVACT-LLGGQCMKAVYLLSN---PNGS 163

Query: 166 LDKRTWTYIFGACCATTVFIPSFHNYR 192
           +    +  IFG        IPSFH+ R
Sbjct: 164 MKLYEFVIIFGCFMLILAQIPSFHSLR 190