Jatropha Genome Database
- JcCA0193141.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0193141.20 - phase: 2 /pseudo/partial
(94 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g087380.1 AMP-dependent synthetase and ligase chr01_p... 82 6e-17
IMGA|Medtr3g117340.1 AMP-dependent synthetase and ligase chr03_p... 78 1e-15
IMGA|Medtr3g117330.1 AMP-dependent synthetase and ligase chr03_p... 78 1e-15
IMGA|AC235664_5.1 AMP-dependent synthetase and ligase; Calcium-b... 70 3e-13
IMGA|AC235487_7.2 AMP-dependent synthetase and ligase AC235487.1... 69 8e-13
IMGA|Medtr8g128740.1 AMP-dependent synthetase and ligase chr08_p... 67 2e-12
IMGA|Medtr5g027650.1 AMP-dependent synthetase and ligase chr05_p... 66 5e-12
IMGA|Medtr5g027670.1 AMP-dependent synthetase and ligase chr05_p... 64 2e-11
IMGA|Medtr8g043300.1 AMP-dependent synthetase and ligase chr08_p... 62 8e-11
IMGA|Medtr4g107290.1 AMP-dependent synthetase and ligase chr04_p... 61 1e-10
IMGA|Medtr5g007720.1 AMP-dependent synthetase and ligase chr05_p... 60 3e-10
IMGA|Medtr4g023340.1 AMP-dependent synthetase and ligase chr04_p... 59 4e-10
IMGA|AC233655_1.1 AMP-dependent synthetase and ligase AC233655.2... 59 6e-10
>IMGA|Medtr1g087380.1 AMP-dependent synthetase and ligase
chr01_pseudomolecule_IMGAG_V3 17602444-17596379 E
EGN_Mt090430 20090702
Length = 542
Score = 82.4 bits (202), Expect = 6e-17, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 48/54 (88%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
YP+E+AGQ+P+AFV+RQ + E++I +F+A+QVAPYK++RRV+FV+S+PKNA
Sbjct: 467 YPDEDAGQIPLAFVIRQPHSSMGEAEIINFVAKQVAPYKKVRRVVFVNSIPKNA 520
>IMGA|Medtr3g117340.1 AMP-dependent synthetase and ligase
chr03_pseudomolecule_IMGAG_V3 29544585-29537488 E
EGN_Mt090430 20090702
Length = 560
Score = 77.8 bits (190), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
YP+E+AGQ+P+AFVVR+ G I +Q+ D++A+QV PYK+IRRV F++S+PK+
Sbjct: 486 YPDEDAGQIPMAFVVRKPGSNITAAQVMDYVAKQVTPYKKIRRVSFINSIPKS 538
>IMGA|Medtr3g117330.1 AMP-dependent synthetase and ligase
chr03_pseudomolecule_IMGAG_V3 29534795-29530003 E
EGN_Mt090430 20090702
Length = 562
Score = 77.8 bits (190), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
YP+E+AGQ+P+AFVVR+ G I +Q+ D++A+QV PYK+IRRV F++S+PK+
Sbjct: 488 YPDEDAGQIPMAFVVRKPGSNITAAQVMDYVAKQVTPYKKIRRVSFINSIPKS 540
>IMGA|AC235664_5.1 AMP-dependent synthetase and ligase;
Calcium-binding EF-hand AC235664.1 17504-20540 E
EGN_Mt090430 20090702
Length = 544
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
+EE GQ+P+A+VVR G ++ E Q+ F+A QVAPYK++RRV F+D +P++A
Sbjct: 472 DEETGQIPMAYVVRAAGSQLTEDQVIQFVAGQVAPYKKVRRVSFIDGIPRSA 523
>IMGA|AC235487_7.2 AMP-dependent synthetase and ligase AC235487.1
32119-34637 E EGN_Mt090430 20090702
Length = 207
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
+P+ EAG+VPVA+VVR + E I+ FIA QVAP+KR+RRV F++++PK A
Sbjct: 137 FPDAEAGEVPVAYVVRSPNSSLTEEDIQKFIADQVAPFKRLRRVTFINTVPKTA 190
>IMGA|Medtr8g128740.1 AMP-dependent synthetase and ligase
chr08_pseudomolecule_IMGAG_V3 30193734-30191189 E
EGN_Mt090430 20090702
Length = 161
Score = 66.6 bits (161), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
+E AG+VPVAFVVR +G +I+E +IK +I+QQV YKRI RV F +++PK A
Sbjct: 88 DEAAGEVPVAFVVRSNGSKISEDEIKQYISQQVVFYKRINRVYFTETIPKAA 139
>IMGA|Medtr5g027650.1 AMP-dependent synthetase and ligase
chr05_pseudomolecule_IMGAG_V3 11309428-11306876 E
EGN_Mt090430 20090702
Length = 555
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 42/51 (82%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
+EEAG++PVAFVV++ G ++ + DF+A+QVAP+K++R+V+F D +P++
Sbjct: 487 DEEAGEIPVAFVVKKVGSVLSPKDVIDFVAKQVAPFKKVRKVVFTDKIPRS 537
>IMGA|Medtr5g027670.1 AMP-dependent synthetase and ligase
chr05_pseudomolecule_IMGAG_V3 11319976-11317383 E
EGN_Mt090430 20090702
Length = 568
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 40/49 (81%)
Query: 25 AGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
AG++PVAFVV++ G ++ + D++A+QVAPYK++R+V+F D +P++A
Sbjct: 503 AGEIPVAFVVKKVGSVLSSQHVIDYVAKQVAPYKKVRKVVFTDKIPRSA 551
>IMGA|Medtr8g043300.1 AMP-dependent synthetase and ligase
chr08_pseudomolecule_IMGAG_V3 9294714-9291001 E
EGN_Mt090430 20090702
Length = 559
Score = 61.6 bits (148), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
YP++EAGQ P+A+VVR+ G I+ESQ+ +F+A Q+ IR+V F+ S+PKN
Sbjct: 493 YPDKEAGQYPMAYVVRKDGSNISESQVMEFVAGQII----IRKVAFIPSIPKN 541
>IMGA|Medtr4g107290.1 AMP-dependent synthetase and ligase
chr04_pseudomolecule_IMGAG_V3 23387848-23390872 E
EGN_Mt090430 20090702
Length = 478
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 40/51 (78%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
+EE G++PVAFVV++ G ++ + +++A+QVAPYK++R+V F D +P++
Sbjct: 410 DEEIGEIPVAFVVKKVGSVLSPKDVVNYVAEQVAPYKKVRKVFFTDKIPRS 460
>IMGA|Medtr5g007720.1 AMP-dependent synthetase and ligase
chr05_pseudomolecule_IMGAG_V3 1270333-1276333 E
EGN_Mt090430 20090702
Length = 587
Score = 59.7 bits (143), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 25 AGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
AG+VPVAFVVR +G + E +K+FIA+QV YKR+ +V FV ++PK+
Sbjct: 522 AGEVPVAFVVRSNGNDLTEEIVKEFIAKQVVFYKRLHKVYFVHAIPKS 569
>IMGA|Medtr4g023340.1 AMP-dependent synthetase and ligase
chr04_pseudomolecule_IMGAG_V3 4958138-4954468 F
EGN_Mt090430 20090702
Length = 539
Score = 59.3 bits (142), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 22 NEEAGQVPVAFVVRQHGR-RINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
+E AG+VPVAFVVR +G E IK F+++QV YKRI RV F+D++PK+
Sbjct: 468 DEAAGEVPVAFVVRSNGSIDTTEDDIKKFVSKQVVFYKRINRVFFIDAIPKS 519
>IMGA|AC233655_1.1 AMP-dependent synthetase and ligase AC233655.2
29515-24780 E EGN_Mt090430 20090702
Length = 551
Score = 58.9 bits (141), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 22 NEEAGQVPVAFVVRQHG-RRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
+E AG+VPVAFVVR +G + + +IK FI++QV YKRI +V F+D++PK+
Sbjct: 480 DEAAGEVPVAFVVRSNGYTDLTQDEIKHFISKQVVFYKRINQVFFIDAIPKS 531