Jatropha Genome Database
- JcCA0155091.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0155091.30 - phase: 1 /TE
(1237 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 211 2e-54
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 207 3e-53
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 203 5e-52
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 199 8e-51
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 197 3e-50
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 196 6e-50
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 194 2e-49
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 191 3e-48
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 190 3e-48
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 179 5e-45
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 173 4e-43
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 169 6e-42
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 148 2e-35
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 148 2e-35
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 142 1e-33
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 132 1e-30
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 131 2e-30
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 78 2e-14
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 72 2e-12
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 70 6e-12
IMGA|Medtr5g029040.1 LTRGag-pol-polymerase 3, related chr05_pseu... 67 7e-11
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 59 1e-08
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 56 1e-07
IMGA|Medtr7g123950.1 Retrotransposon gag protein chr07_pseudomol... 52 1e-06
IMGA|Medtr5g086570.1 Ty1/copia-element polyprotein, related chr0... 52 3e-06
IMGA|Medtr7g116810.1 hypothetical protein chr07_pseudomolecule_I... 52 3e-06
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 168/294 (57%), Gaps = 12/294 (4%)
Query: 461 VWHQRLGH---PQMSALNNLHNKGLISVRGPLKINQVCDSCQLGKLSKFPFYKSANSATT 517
+WH RLGH ++S ++ L+ ++ + CD C + K PF S++ A +
Sbjct: 511 LWHFRLGHLSNQRLSTMSRLYPSIIVDNKA------ACDICHFARHKKLPFPHSSSHANS 564
Query: 518 PFEKIHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIKRQ 577
F+ +H D+WGP + + KY+ +VDD ++++WII L+ K++ F + I+ Q
Sbjct: 565 KFQLLHFDIWGPLAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQ 624
Query: 578 YNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGMSM 637
++ K+ ++D G EF+ L + GI+H SC TP+Q G VER+H+ I +G ++
Sbjct: 625 FHITPKIIRTDNGSEFL---LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRAL 681
Query: 638 LFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFPYI 697
L+ S+LPLSFW AF AV+LINR+P+ + +SP+ L+ PD + +VFGC C+
Sbjct: 682 LYQSKLPLSFWSYAFLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASS 741
Query: 698 WDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHVVFDEGYFPYKS 751
+ + K + ++ VF GY +KG YD+ R+ ISRHVVF E PYKS
Sbjct: 742 LQSHRTKLETRARKSVFLGYKSGFKGSVLYDLHTREIFISRHVVFHECVLPYKS 795
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 161/289 (55%), Gaps = 6/289 (2%)
Query: 461 VWHQRLGHPQMSALNNLHNKGLISVRGPLKINQVCDSCQLGKLSKFPFYKSANSATTPFE 520
+WH RLGH +S +H L + ++ CD C K K PF S + A+ FE
Sbjct: 491 LWHFRLGH--VSPKRLIHMSQLYPTLT-VDVHATCDICHFAKQKKLPFSNSISVASIKFE 547
Query: 521 KIHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIKRQYNA 580
+H D+WGP + SI +Y+ ++DD+S+YVWI+ L+ KS+ F + I+ QYN
Sbjct: 548 LLHFDIWGPLSITSIHNHRYFLTILDDYSRYVWIVLLKSKSEVSQHVKNFINLIQTQYNI 607
Query: 581 VIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGMSMLFH 640
K +SD G EF+ L + + GIVHH SC TP+Q G VER+H+ I +G ++L+
Sbjct: 608 TPKTVRSDNGPEFL---LHSFYASKGIVHHRSCVETPQQNGRVERKHQHILNVGRALLYQ 664
Query: 641 SRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFPYIWDT 700
S+LP+S+W A A ++INR+ S ++ +SP+ LH P + +VFG C+ +
Sbjct: 665 SKLPVSYWSYALLHATFIINRVTSPTLHNKSPYQLLHDTIPAEHIFKVFGSLCYSTTLHS 724
Query: 701 RKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHVVFDEGYFPY 749
+ K ++ VF GY+ +KGY DI R+ ISRHV F E PY
Sbjct: 725 HRTKLSARARKSVFLGYTVGFKGYVLLDIHTREIHISRHVQFYEHILPY 773
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 199/412 (48%), Gaps = 26/412 (6%)
Query: 319 TLDNSVRDHDWTSDTGTTNHMTGNEGMISSLYKYTXXXXXXXXXXXXXXXAGVGTAEICK 378
+ D+ D W DTG T+H + +S Y +G ++ K
Sbjct: 388 SFDSKQNDPGWIVDTGATHHTCYDLNWFTS-YSKIETINVNLPNGSVIEACYIGQVKLSK 446
Query: 379 NNNVLPLSEILYVPXXXXXXXXXXXXXXQFPVNCEFTNDSFIVKEWKTGATIMQGPKKGD 438
+ L + +LY+P + EF D I++E T I +K
Sbjct: 447 D---LSIDNVLYLPKFAVNLISVSKLCREQNCKLEFEADICIIQEKNTLRKIGLAKEKHG 503
Query: 439 LYTISSSPEANFSFRFKSCSADV----------WHQRLGH---PQMSALNNLHNKGLISV 485
LY + + S S ++ WH RLGH +M +N +++
Sbjct: 504 LYYLETDERNKVSVSNISAQVELHQKHVPDGVLWHLRLGHLSHDRMICMNKMYS------ 557
Query: 486 RGPLKINQVCDSCQLGKLSKFPFYKSANSATTPFEKIHCDVWGPAPVLSIEKFKYYACLV 545
P+ + CD CQ+ + PF S+ +A T F+ +H D+WGP S+ KY+ ++
Sbjct: 558 YVPVSPHTACDVCQMCRQKILPFPISSRNAKTAFDLVHFDIWGPFSTTSVHGHKYFLTIL 617
Query: 546 DDFSKYVWIIPLRLKSDFYSAFIAFESYIKRQYNAVIKVYQSDGGGEFVNSALATHFLKT 605
DD +++VWI+ L+ KS+ F S ++RQ+ IK+ +SD G EF+ L + K
Sbjct: 618 DDCTRHVWIVMLKNKSEASYQVKNFVSMVERQFERKIKMIRSDNGPEFM---LREFYDKK 674
Query: 606 GIVHHISCPYTPEQAGTVERRHRIIRELGMSMLFHSRLPLSFWFNAFSTAVYLINRLPSS 665
GI+H SC YTP+Q G VERRH+ I + +++F S+LP +FW A AVYLINR+P+
Sbjct: 675 GIIHQRSCVYTPQQNGRVERRHQHILNISRALMFQSKLPKNFWSYAVLHAVYLINRIPTK 734
Query: 666 SISFESPFYQLHHKHPDYSVLRVFGCKCFPYIWDTRKNKFDPKSVLCVFAGY 717
++ +S + L+++ PD S L+VFGC + + KFDPK+ C F G+
Sbjct: 735 ILNNKSSYEVLYNEVPDLSSLKVFGCLSYASTLPVNRYKFDPKARKCAFLGF 786
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 160/294 (54%), Gaps = 23/294 (7%)
Query: 465 RLGHPQMSALNNLHNKGLISVRGPLKINQVCDSCQLGKLSKFPFYKSANSATTPFEKIHC 524
L H +M+ +++L++ + + N VCD C K PF S + AT+ FE +H
Sbjct: 473 HLSHQRMNMMSSLYSNIVSDNK-----NSVCDICHFAKQKHLPFSISTSHATSNFELLHL 527
Query: 525 DVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIKRQYNAVIKV 584
D+WGP + SI KY+ +VDD S+++WII L+ KS +F ++ Q++ K
Sbjct: 528 DIWGPLSISSIHGHKYFLTIVDDHSRFLWIISLKTKSGVSHHVKSFIKMVQTQFHVTPKC 587
Query: 585 YQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGMSMLFHSRLP 644
+SD G EF+ + + + GI+H SC TP+Q G VER+H I +G ++L+ S+LP
Sbjct: 588 IRSDNGPEFL---ILSFYESLGILHQKSCVETPQQNGRVERKHHHILNVGRALLYQSKLP 644
Query: 645 LSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFPYIWDTRKNK 704
S+W A AV+LINR P+ + +SP+Y LHHK PD DT KN+
Sbjct: 645 ASYWSYALLHAVFLINRKPTPLLEGQSPYYALHHKFPDI---------------DTFKNQ 689
Query: 705 FDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHVVFDEGYFPYKSKEKKCIS 758
++ VF GY YKG+ DI +R+ +SRHVVF E + PY S + S
Sbjct: 690 ASTRARKTVFLGYKSGYKGFILLDIHSREIFVSRHVVFHEYFLPYPSNSESITS 743
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 168/320 (52%), Gaps = 12/320 (3%)
Query: 439 LYTISSSPEANFSFRFKSCSADVWHQR----LGHPQMSALNNLHNKGL--ISVRGP---L 489
++ + SS SF K C H + LG L ++ NK L +S P +
Sbjct: 449 IFKVCSSLHCYASFHDKKCFLQDLHSQKMIGLGEQVRGLLGHVSNKRLNHMSHLYPTLTV 508
Query: 490 KINQVCDSCQLGKLSKFPFYKSANSATTPFEKIHCDVWGPAPVLSIEKFKYYACLVDDFS 549
+ CD CQ K K F S + A++ FE +H D+WGP V SI +Y+ ++DD+S
Sbjct: 509 DNHATCDICQFAKQKKLSFPTSVSVASSKFELLHFDIWGPLAVTSIHNHRYFLTILDDYS 568
Query: 550 KYVWIIPLRLKSDFYSAFIAFESYIKRQYNAVIKVYQSDGGGEFVNSALATHFLKTGIVH 609
+ WI+ L+ K + F + I QY+ KV +SD G EF+ L + + GIVH
Sbjct: 569 IFFWIVLLKSKYEVSQHVKNFINLIHTQYHITPKVVRSDNGPEFL---LNSFYASKGIVH 625
Query: 610 HISCPYTPEQAGTVERRHRIIRELGMSMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISF 669
H SC TP+Q G VER+H+ I +G ++LF S+LP S+W A A+++INR+ S ++
Sbjct: 626 HKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPSSYWSYALLHAIFIINRVTSPTLHN 685
Query: 670 ESPFYQLHHKHPDYSVLRVFGCKCFPYIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDI 729
+SP+ LH PD +VFG C+ + + K ++ VF GY+ YKGY DI
Sbjct: 686 KSPYQLLHGTIPDVQTFKVFGSLCYSTTLQSHRTKLSARARKTVFLGYAVGYKGYVLLDI 745
Query: 730 QNRKYVISRHVVFDEGYFPY 749
R+ ISRHV F E PY
Sbjct: 746 HTREIHISRHVQFHEHILPY 765
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 151/257 (58%), Gaps = 3/257 (1%)
Query: 495 CDSCQLGKLSKFPFYKSANSATTPFEKIHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWI 554
CD C + K PF S++ A++ F+ +H D+WGP + SI KY+ +VDD ++++WI
Sbjct: 16 CDVCHFARHKKLPFSHSSSHASSKFQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLWI 75
Query: 555 IPLRLKSDFYSAFIAFESYIKRQYNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCP 614
I L+ K++ F I+ Q++ K+ ++D G EF+ L + GI+H SC
Sbjct: 76 ILLKTKAEVPMHIKNFIVMIENQFHVTPKIIRTDNGSEFL---LHEFYASKGILHQSSCV 132
Query: 615 YTPEQAGTVERRHRIIRELGMSMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFY 674
TP+Q G VER+H+ I +G ++L+ S+LPLSFW AF AV+LINR+ + + SP++
Sbjct: 133 ETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPYH 192
Query: 675 QLHHKHPDYSVLRVFGCKCFPYIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKY 734
L+ PD + +VFGC C+ + K + ++ VF GY +KGY YD+ R+
Sbjct: 193 LLYDSPPDITTFKVFGCLCYASSLQSHITKLETRARKSVFLGYKLGFKGYVLYDLHTREI 252
Query: 735 VISRHVVFDEGYFPYKS 751
ISRHVVF E PYKS
Sbjct: 253 FISRHVVFHECVLPYKS 269
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 172/320 (53%), Gaps = 36/320 (11%)
Query: 441 TISSSPEANFSFRFKSCS-------ADVWHQRLGH---PQMSALNNLHNKGLISVRGPLK 490
++ SP + +F SC+ A +WH RLGH +M +++L+ + + R
Sbjct: 467 SLMHSPNKSCNFSSISCNSNNCIPVAALWHFRLGHLSNQRMIKMSHLYPSIVHNNR---- 522
Query: 491 INQVCDSCQLGKLSKFPFYKSANSATTPFEKIHCDVWGPAPVLSIEKFKYYACLVDDFSK 550
VCD C K PF S + A+T FE +H D+WGP + S+ +Y+ ++DD S+
Sbjct: 523 --DVCDICHFSKQKHLPFSSSLSHASTNFELLHFDIWGPISISSVHGHRYFLTILDDHSR 580
Query: 551 YVWIIPLRLKSDFYSAFIAFESYIKRQYNAVIKVYQSDGGGEFV-NSALATHFLKTGIVH 609
++WII L+ KS+ F I+ Q++ K +SD G EF+ N ++H GI+H
Sbjct: 581 FLWIILLKSKSEVSLHVKNFILMIRTQFHVTPKYVRSDNGPEFLLNDFYSSH----GIIH 636
Query: 610 HISCPYTPEQAGTVERRHRIIRELGMSMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISF 669
SC TP+Q G VER+H+ I +G ++L+ S+LP SFW A AV+LINR+P+ +
Sbjct: 637 QKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAILHAVFLINRVPTHVLHN 696
Query: 670 ESPFYQLHHKHPDYSVLRVFGCKCFPYIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDI 729
+SP++ L HK PD + K+K P++ +F GY YKGY +D+
Sbjct: 697 QSPYHVLFHKLPDIQLF---------------KSKLQPRARKSLFLGYKSGYKGYHLFDL 741
Query: 730 QNRKYVISRHVVFDEGYFPY 749
R+ +SRHV+F E PY
Sbjct: 742 STREIFVSRHVIFHENILPY 761
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%)
Query: 461 VWHQRLGHPQMSALNNLHNKGLISVRG-----PLKINQVCDSCQLGKLSKFPFYKSANSA 515
+WH RLGH L N L+ ++ + N VCD C + K PF S N A
Sbjct: 534 LWHFRLGH--------LSNDRLLRMQQHFPCIKVDSNSVCDICHYSRHKKLPFKLSMNKA 585
Query: 516 TTPFEKIHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIK 575
+ +E IH D+WGP SI KY+ +DD+S++ WI+ + KS+ + F I+
Sbjct: 586 SHCYELIHFDIWGPISTHSIHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIE 645
Query: 576 RQYNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGM 635
Q+N +K ++D G EF+ + + GI H SC TP+Q G VER+H+ I +
Sbjct: 646 NQFNCKVKTVRTDNGPEFL---MPDFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVAR 702
Query: 636 SMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFP 695
++LF S+LP FW + A+Y+INR+P+ + +SP++ + PD + +VFGC +
Sbjct: 703 ALLFQSKLPKIFWSYSVLHAIYIINRIPTPLLQNKSPYFLRYGHDPDLNNFKVFGCLSYA 762
Query: 696 YIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHVVFDEGYFPYKSKEK 754
+ KFD ++ CVF GY KG YD+ ++ SR+V + E PY + +
Sbjct: 763 STLHNHRTKFDSRAQKCVFLGYKQGIKGAILYDLNHKTIFASRNVTYHEHILPYSNSNQ 821
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 16/299 (5%)
Query: 461 VWHQRLGHPQMSALNNLHNKGLISVRG-----PLKINQVCDSCQLGKLSKFPFYKSANSA 515
+WH RLGH L N L+ ++ + N VCD C + K PF S N A
Sbjct: 464 LWHFRLGH--------LSNDRLLRMQQHFPCIKVDSNSVCDICHYSRHKKLPFKLSMNKA 515
Query: 516 TTPFEKIHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIK 575
+ +E IH D+WGP SI KY+ +DD+S++ WI+ + KS+ + F I+
Sbjct: 516 SHCYELIHFDIWGPISTHSIHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIE 575
Query: 576 RQYNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGM 635
Q+N +K ++D G EF+ + + GI H SC TP+Q G VER+H+ I +
Sbjct: 576 NQFNCKVKTVRTDNGPEFL---MPDFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVAR 632
Query: 636 SMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFP 695
++LF S+LP FW + A+Y+INR+P+ + +SP++ + PD + +VFGC +
Sbjct: 633 ALLFQSKLPKVFWSYSVLHAIYIINRIPTPLLQNKSPYFLRYGHDPDLNNFKVFGCLSYA 692
Query: 696 YIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHVVFDEGYFPYKSKEK 754
+ KFD ++ CVF GY KG YD+ ++ SR+V + E PY + ++
Sbjct: 693 STLHNHRTKFDSRAQKCVFLGYKQGIKGAILYDLNHKTIFASRNVTYHEHILPYSNSKQ 751
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 152/270 (56%), Gaps = 12/270 (4%)
Query: 461 VWHQRLGH---PQMSALNNLHNKGLISVRGPLKINQVCDSCQLGKLSKFPFYKSANSATT 517
+WH RLGH ++S ++ L+ ++ + CD C + K PF S++ A +
Sbjct: 511 LWHFRLGHLSNQRLSTMSRLYPSIIVDNKA------ACDICHFARHKKLPFPHSSSHANS 564
Query: 518 PFEKIHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIKRQ 577
F+ +H D+WGP + + KY+ +VDD ++++WII L+ K++ F + I+ Q
Sbjct: 565 KFQLLHFDIWGPLAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQ 624
Query: 578 YNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGMSM 637
++ K+ ++D G EF+ L + GI+H SC TP+Q G VER+H+ I +G ++
Sbjct: 625 FHITPKIIRTDNGSEFL---LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRAL 681
Query: 638 LFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFPYI 697
L+ S+LPLSFW AF AV+LINR+P+ + +SP+ L+ PD + +VFGC C+
Sbjct: 682 LYQSKLPLSFWSYAFLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASS 741
Query: 698 WDTRKNKFDPKSVLCVFAGYSDKYKGYRCY 727
+ + K + ++ VF GY + Y C+
Sbjct: 742 LQSHRTKLETRARKSVFLGYKNFYFQTCCF 771
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 146/292 (50%), Gaps = 41/292 (14%)
Query: 458 SADVWHQRLGHPQMSALNNLHNKGLISVRGPLKINQVCDSCQLGKLSKFPFYKSANSATT 517
S +WH RLGH L L L+ + +CD C K PF
Sbjct: 532 SDTLWHFRLGHLSKQRLQTL---SLLYPSIKIDNKAICDLCHFAKHKHLPFTS------- 581
Query: 518 PFEKIHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIKRQ 577
+D S+++WII L+ K++ + F + IK
Sbjct: 582 ----------------------------NDHSRFLWIILLKTKAEVSTHVKNFITMIKNH 613
Query: 578 YNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGMSM 637
++ K ++D G EF+ L+T + GI+H SC TP+Q G VER+H+ I +G ++
Sbjct: 614 FHTTPKFIRTDNGPEFM---LSTLYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGRAL 670
Query: 638 LFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFPYI 697
L+ S+LP ++W A AV+LINR+P+ +++ +SP++ LHHK PD S+ +VFGC C+
Sbjct: 671 LYQSKLPPAYWCYAIQHAVFLINRVPTPTLNNQSPYFVLHHKLPDSSLFKVFGCLCYAST 730
Query: 698 WDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHVVFDEGYFPY 749
+ K ++ +F GY YKG+ YD+ +R+ ISRHV F E + PY
Sbjct: 731 LQSHTTKLKHRARKSIFIGYQSGYKGFTLYDLHSREIFISRHVTFHENFLPY 782
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 10 VTLKLTQNNYLLWREQVLGLAESQDLTEHITEEPPMNPAGSDKATDQAIQNFTTWKKADR 69
+T KLT +NY+ W V +++ I PM D+ N W++ +
Sbjct: 27 ITPKLTGSNYIAWSRTVERSLGTKNKLGFINGSIPM--------PDEDDLNRAAWERCNH 78
Query: 70 LLRGWIIGTLSEESLGLVIGLDTAFAVWNGLKESYSQVSQEREFTLCQQLTYLRKDETVP 129
L++ W+I ++S+ V+ DTA VW LKE +S++ + R L + L++
Sbjct: 79 LVQSWLINSVSDSIAPTVVFCDTALEVWLDLKERFSKIDRIRIANLRSSINNLKQGAKT- 137
Query: 130 ITTHIRQFKNICDSLAAIGRPIS--------------------KKEKIYSLLTSLGPQYE 169
+ + + K++ + L++ RPI +++I LTSL Q+
Sbjct: 138 VLDYFTEMKSLWEELSS-HRPIPNCVCVHQCRCLASRIAKTHRNEDQIMQFLTSLNDQFS 196
Query: 170 TF-TTTMLKPPTPS----YTELISQLQNH 193
T +L P PS Y+ ++ + NH
Sbjct: 197 VVRTQVLLLDPLPSLNKVYSLVVQEESNH 225
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 169 bits (429), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 181/793 (22%), Positives = 313/793 (39%), Gaps = 143/793 (18%)
Query: 10 VTLKLTQNNYLLWR---EQVLGLAESQDLTEHITEEPPMNPAGSDKATDQAIQNFTTWKK 66
VT LT NYL W ++ LG + PPM+ N T W++
Sbjct: 32 VTPLLTGPNYLAWNRSMKRALGTKNKFVFIDGSVPIPPMDDL-----------NRTAWER 80
Query: 67 ADRLLRGWIIGTLSEESLGLVIGLDTAFAVWNGLKESYSQVSQEREFTLCQQLTYLRK-D 125
+ L+ WII ++S + ++ + A VW L+E +S+V + R +L + L++ D
Sbjct: 81 CNNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSINNLKQGD 140
Query: 126 ETV------------------PITTHIRQFKNICDSLAAIGRPISKKEKIYSLLTSLGPQ 167
++V P+ + C+S+ A R ++++ LT L
Sbjct: 141 KSVLDYFTSIKSLWEELNSHRPMPMCTCPYPCRCESMRA-ARDFRMEDQVIQFLTGLNDS 199
Query: 168 YETFTT-TMLKPPTPS----YTELISQLQNHDQRRTWFTNTGNSALA----TRTPHLAFY 218
+ T +L P PS Y+ +I + N + +N +S L R P L
Sbjct: 200 FSVVKTQVLLIDPLPSINKVYSMVIQEESNIIPPTSLASNEDSSILVNASDARKPFL--- 256
Query: 219 AQSKRDQQFGVSNSNYDSKNXXXXXXXXXXXXQAQNQGNFSGQTRRPAPPGKRRMTVAER 278
R + G S S +S+ + +F + P +E
Sbjct: 257 ----RGKSSGTSQSKNNSRYCTFCRRNNHTVEYCYLKHDFPNANK---PTASSNAVTSEH 309
Query: 279 E-----------------LYRDETCQICSKKGHIAKICWWIPSSTP---------TESLP 312
L +++ + S + + +PS+TP S P
Sbjct: 310 AVDSHTSSEGTSSSSQTGLTQEQYVHLVS----LLQQSSLVPSATPPNPASTNHVATSFP 365
Query: 313 QALASLTLDNSV--------RDHDWTSDTGTTNHMTGNEGMISSLYKYTXXXXXXXXXXX 364
++ + N++ DH W D+G H+ + + S Y+
Sbjct: 366 SSIDFTSGINTIFSCSLHVPSDH-WLIDSGANEHICSSLHLFHSYYRIKPICVNLPNGSS 424
Query: 365 XXXXAGVGTAEICKNNNVLPLSEILYVPXXXXXXXXXXXXXXQFPVNCEFTNDSFIVKEW 424
GT + ++ + +LY P P + F +++++++
Sbjct: 425 VIVQYA-GTVVFSPHFHI---THVLYSPSFKVYLISVSKICQSLPYHVHFLLNTYVIQDV 480
Query: 425 KTGATIMQGPKKGDLYTIS----SSPEANF-------------------SFRFKSCSADV 461
KT I G LY + +SP+A+F + S +
Sbjct: 481 KTQKMIGLGNLCDGLYRLHPFAPASPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAI 540
Query: 462 WHQRLGHPQMSALNNLHNKGLISVRGPLKINQVCDSCQLGKLSKFPFYKSANSATTPFEK 521
WH RLGH L+ +H S+ + I+ K+ + A++ FE
Sbjct: 541 WHFRLGHLSNQRLSMMH-----SLYSSITIDN----------------KAYSIASSKFEL 579
Query: 522 IHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIKRQYNAV 581
+H D+WGP V S+ KY+ +VDDFS+++W+I L+ KS+ + F I Y
Sbjct: 580 LHFDIWGPLSVTSVHGHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQIT 639
Query: 582 IKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGMSMLFHS 641
K +SD G EF+ + + GI+H SC TP+Q G VER+H+ I + ++LF S
Sbjct: 640 PKYIRSDNGPEFL---IPEFYASKGIIHQKSCVETPQQNGRVERKHQHILNVARALLFQS 696
Query: 642 RLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFPYIWDTR 701
+LP FW A AV+LIN++P+ +SP+ L+ PD + +VFGC CF +
Sbjct: 697 KLPNFFWSYAVIHAVFLINKVPTPLFKQKSPYQLLYDSLPDINSFKVFGCLCFASTLLAQ 756
Query: 702 KNKFDPKSVLCVF 714
++K ++ +F
Sbjct: 757 RSKLQSRARKSIF 769
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 108/178 (60%), Gaps = 3/178 (1%)
Query: 574 IKRQYNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIREL 633
I+ Q++ K+ ++D G EF+ L + GI+H SC TP+Q G VER+H+ I +
Sbjct: 2 IENQFHVTPKIIRTDNGSEFL---LHEFYASKGILHQRSCVETPQQNGRVERKHQHILNI 58
Query: 634 GMSMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKC 693
G ++L+ S+LPLSFW AF AV+LINR+P+ + SP++ L+ PD + +VFGC C
Sbjct: 59 GRALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDITTFKVFGCLC 118
Query: 694 FPYIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHVVFDEGYFPYKS 751
+ + + K + ++ VF GY +KGY YD+ R+ ISRHVVF E PYKS
Sbjct: 119 YASSLQSHRTKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHECVLPYKS 176
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 49/250 (19%)
Query: 500 LGKLSKFPFYKSANSATTPFEKIHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRL 559
+ + S+ PF ++ T FE +H D+WGP + + FKY+ LVDDFSK W L
Sbjct: 1 MARQSRLPFPPKTHTTTGIFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSC 60
Query: 560 KSDFYSAFIAFESYIKRQYNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQ 619
KS+ + AF ++ Q++ +K +SD G EF ++ F GI+H SCPYTP+Q
Sbjct: 61 KSNAFHVLKAFILMVENQFSTTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQ 120
Query: 620 AGTVERRHRIIRELGMSMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHK 679
G VER+H+ I E ++LF S+LP+ +W S F+
Sbjct: 121 NGVVERKHKFILETARALLFQSKLPVKYW----------------------SEFH----- 153
Query: 680 HPDYSVLRVFGCKCFPYIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRH 739
+ KFDPK++ VF GY KGY+ ++ +K +SR
Sbjct: 154 ----------------------RTKFDPKTIPHVFVGYPYATKGYKVLNLSTQKIHVSRD 191
Query: 740 VVFDEGYFPY 749
V+F E FP+
Sbjct: 192 VIFHETIFPF 201
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 45/296 (15%)
Query: 458 SADVWHQRLGHPQMSALNNLHNKGLISVRGPLKINQ--VCDSCQLGKLSKFPFYKSANSA 515
S +WH RLGH L+ +H+ + + ++ +CD C K K P+ S + A
Sbjct: 441 STALWHFRLGHLSNQRLSQMHH-----LYPDIHVDNKFICDICHFAKQRKLPYNSSTSIA 495
Query: 516 TTPFEKIHCDVWGPAPVLSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIK 575
++ FE ++ D+WGP +SI +Y+ +VDD S+++W I + KS+ S F I+
Sbjct: 496 SSNFELLYLDIWGPLAKVSIHGQRYFLTIVDDHSRFLWTILFKNKSEVPSHIQHFIYLIQ 555
Query: 576 RQYNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGM 635
++ K+ +SD G F+ SA + GI+H SC TP+
Sbjct: 556 NKHKVTPKIIRSDNGHVFLLSAF---YASQGIIHQRSCVETPQH---------------- 596
Query: 636 SMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFP 695
V+LINR+P+ + +SP+ L+ PD + +VFGC C+
Sbjct: 597 -------------------NVFLINRVPTLVLENKSPYQVLYKTLPDINSFKVFGCLCYA 637
Query: 696 YIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHVVFDEGYFPYKS 751
+ + K ++ VF GY YKG YD+ ++ +SR+V F E PY S
Sbjct: 638 STLQSHRTKLQSRARKSVFLGYKSGYKGSFLYDLNTKEIFMSRNVTFHESILPYNS 693
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 95/167 (56%), Gaps = 3/167 (1%)
Query: 583 KVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGMSMLFHSR 642
K + D G EF+ L + GI+HH SC TP+Q G VER+H+ I + ++LF S+
Sbjct: 459 KTIRIDNGPEFM---LKDFYASHGIIHHKSCVETPQQNGRVERKHQHILNVVRALLFQSK 515
Query: 643 LPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFPYIWDTRK 702
LP +FW A AV+LINR+ + + +SP+ LH+K P + +VFGC C+ +
Sbjct: 516 LPPTFWSYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYASTLQNHR 575
Query: 703 NKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHVVFDEGYFPY 749
K ++ +F GY YKGY +D+ +R+ ISRHV F E PY
Sbjct: 576 TKLQSRARKSIFLGYQSGYKGYVLFDLTSREIFISRHVSFHETILPY 622
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 10 VTLKLTQNNYLLWREQVLGLAESQDLTEHITEEPPMNPAGSDKATDQAIQNFTTWKKADR 69
VT K NYL W + ++ I E P+ P D N T W++ +
Sbjct: 31 VTPKFNGTNYLAWSRSMQRALGAKCKLGFINGEIPV-PDADD-------LNRTAWERCNH 82
Query: 70 LLRGWIIGTLSEESLGLVIGLDTAFAVWNGLKESYSQVSQEREFTLCQQLTYLRKDETVP 129
L++ WI+ +LSE V+ D+A VW L E +S+ + R TL + L K T
Sbjct: 83 LVQSWILNSLSESIAQTVVFCDSASEVWQDLHERFSKTDRIRIATLRSSINIL-KQGTKS 141
Query: 130 ITTHIRQFKNICDSLAA-------------------IGRPISKKEKIYSLLTSLGPQYET 170
+ + + K + + ++ + + +++I LT L Q+
Sbjct: 142 VLDYFTELKGLWEEFSSHLPIPNCICVHPCRCEATRVAKTHRTEDQIMQFLTGLNDQFSV 201
Query: 171 F-TTTMLKPPTPSYTELISQL 190
T +L P PS ++ S +
Sbjct: 202 VKTQILLLDPLPSLNKVYSMV 222
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 11/215 (5%)
Query: 480 KGLISVRGPLKINQVCDSCQLGKLSKFPFYKSANSATTPFEKIHCDV-------WGPAPV 532
K LI + LK+ + Q G +P KS+N + C+V WGP V
Sbjct: 469 KCLIQDQQSLKMIGLAKQ-QDGLYKFYPSCKSSNFEFSALSPSSCNVVSISNYIWGPLSV 527
Query: 533 LSIEKFKYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIKRQYNAVIKVYQSDGGGE 592
S+ +Y+ ++DD ++++W+I L+ K++ S F + I+ ++ K ++D G E
Sbjct: 528 ASVHGHRYFLTILDDHTRFLWVILLKTKAEVSSHVKNFITMIQNHFHTTPKFIRTDNGPE 587
Query: 593 FVNSALATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGMSMLFHSRLPLSFWFNAF 652
F+ L + + GI+H SC TP+Q G VER+H+ I +G ++L+ S+LP SFW A
Sbjct: 588 FM---LPSFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAI 644
Query: 653 STAVYLINRLPSSSISFESPFYQLHHKHPDYSVLR 687
AV+LINR+P+ + +SP++ LHHK PD ++ +
Sbjct: 645 HHAVFLINRVPTPLLHNQSPYFLLHHKLPDIALFK 679
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 35/209 (16%)
Query: 10 VTLKLTQNNYLLWREQVLGLAESQDLTEHITEEPPMNPAGSDKATDQAIQNFTTWKKADR 69
+T K +NY+ W V +++ I PM D+ N T W++ +
Sbjct: 28 ITPKFNGSNYIAWSRTVERSLGTKNKLGFINGSIPM--------PDEDDLNRTAWERCNH 79
Query: 70 LLRGWIIGTLSEESLGLVIGLDTAFAVWNGLKESYSQVSQEREFTLCQQLTYLRKDETVP 129
L++ W+I ++SE ++ D+A VW LKE +S++ + R L + L++
Sbjct: 80 LVQSWLINSVSESIAQTIVFCDSALEVWLDLKERFSKIDRIRIANLRSNINNLKQGSKF- 138
Query: 130 ITTHIRQFKNICDSLAAIGRPIS--------------------KKEKIYSLLTSLGPQYE 169
+ + + K++ + L++ RPI +++I LT L Q+
Sbjct: 139 VLDYFTEIKSLWEELSS-HRPIPNCSCIHPCRCAASKVAKIHRNEDQIMQFLTGLNDQFS 197
Query: 170 TF-TTTMLKPPTPS----YTELISQLQNH 193
T +L P PS Y+ ++ + NH
Sbjct: 198 VVRTQVLLLDPLPSMNKVYSLVVQEESNH 226
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 491 INQVCDSCQLGKLSKFPFYKSAN-SATTPFEKIHCDVWGPAPVLSIEKFKYYACLVDDFS 549
+ + C+ C +GK S+ F A +H D++GP V + +Y+ VD++S
Sbjct: 11 VEKSCNICLVGKHSRSAFKSELKMRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDEYS 70
Query: 550 KYVWIIPLRLKSDFYSAFIAFESYIKRQYNAVIKVYQSDGGGEFVNSALATHFLKTGIVH 609
K +W+ ++LKSD F F+ ++Q +K+ + GGGE+ + ++ GI+H
Sbjct: 71 KMLWLYLIKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSKDFESYCTNQGIIH 130
Query: 610 HISCPYTP 617
++ PYTP
Sbjct: 131 EVTTPYTP 138
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 636 SMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQLHHKHPDYSVLRVFGCKCFP 695
SML ++P FW A +TA Y++NR P+ + + P + P S L+VFG +
Sbjct: 4 SMLKEKKIPHEFWGAAVNTATYILNRCPTKKMKDKVPEEIWSRRKPSISNLKVFGSIFYK 63
Query: 696 YIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKYVISRHV-VFDEGYFPYKSKE 753
++ D+R+ K + K+ + GY + YR D+ ++K I+R V V +E Y+ + S E
Sbjct: 64 HVPDSRRKKLEDKTEAMILVGYHNT-GAYRLLDLHSKKISITRDVKVLEEEYWDWNSNE 121
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 539 KYYACLVDDFSKYVWIIPLRLKSDFYSAFIAFESYIKRQYNAVIKVYQSDGGGEFVNSAL 598
+Y+ +DD+S + WI ++ + + +I F I+ Q++ VIKV++ D E+ +S L
Sbjct: 5 RYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYRDSKL 64
Query: 599 ATHFLKTGIVHHISCPYTPEQAGTVERRHRIIRELGMSMLFHSRLP 644
+ + G S PYT +Q G ER+HR I + +ML + P
Sbjct: 65 LSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISASCP 110
>IMGA|Medtr5g029040.1 LTRGag-pol-polymerase 3, related
chr05_pseudomolecule_IMGAG_V3 12052697-12051982 H
EGN_Mt090430 20090702
Length = 223
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 18 NYLLWREQVLGLAESQDLTEHITEEPPMNPAGSDKATDQAIQNFTTWKKADRLLRGWIIG 77
+Y W E L A + D+ +HI PP N + A W D +++ WI
Sbjct: 5 HYDSWAELFLNAANAFDVADHII--PPKNATVKEDAQ---------WSCLDAIVKQWIYS 53
Query: 78 TLSEESLGLVIGLD-TAFAVWNGLKESYSQVSQEREFTLCQQLTYLRKDETVPITTHIRQ 136
T+S + L ++ TA WN LK+ + R L QQ + + D +++ +
Sbjct: 54 TISIDLLHTILKPGATAQEAWNRLKDIFHDNKNSRAVYLEQQFSQIHMDNYPNASSYCQA 113
Query: 137 FKNICDSLAAIGRPISKKEKIYSLLTSLGPQYETFTTTMLK-PPTPSYTELISQLQNHDQ 195
K I + L +G P+S+ + L+T L Y++ T + + P PS+ + S L +
Sbjct: 114 LKLIAEQLGNVGAPVSEDRLVLRLVTGLSSGYDSLATIIQQLDPLPSFYKARSMLTLEET 173
Query: 196 RRTWFTNTGNSALATRTPHLAFYAQSKRDQQFGVSNSNYDSKN 238
RR NTG + T A R + V+ S Y ++N
Sbjct: 174 RRN--KNTGAESALVHTQSDVSSAAPNRSSE--VAPSRYSNRN 212
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 616 TPEQAGTVERRHRIIRELGMSMLFHSRLPLSFWFNAFSTAVYLINRLPSSSISFESPFYQ 675
TP+ G ER ++ + E ML + L +FW A +T YL+NR P +SI+ ++ +
Sbjct: 5 TPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTLYEL 64
Query: 676 LHHKHPDYSVLRVFGCKCFPYI--WDTRKNK 704
K DYS LRVFGC + ++ W + K
Sbjct: 65 WPGKSVDYSNLRVFGCTVYYHVNEWKLERRK 95
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 558 RLKSDFYSAFIAFESYIKRQYNAVIKVYQSDGGGEFVNSALATHFLKTGIVHHISCPYTP 617
+ KS+ + F I+ Q+N +K ++D G EF+ + + GI H SC TP
Sbjct: 4 KTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL---MPDFYSSKGIEHQTSCVETP 60
Query: 618 EQAGTVERRHRIIRELGMSMLFHSRLPLSFWF 649
+Q G VER+H+ I + +MLF S+ + F F
Sbjct: 61 QQNGRVERKHQHILNVARAMLFQSKFMVLFSF 92
>IMGA|Medtr7g123950.1 Retrotransposon gag protein
chr07_pseudomolecule_IMGAG_V3 29015812-29013196 E
EGN_Mt090430 20090702
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 49 GSDKATDQAIQNFTTWKKADRLLRGWIIGTLSEESLGLVIGLDTAFAVWNGLKESYSQVS 108
G+ KA WK+ + L+ WI+ ++ + VI DTA AVW+ L + +SQ
Sbjct: 79 GTVKAPSADDPKLPLWKRCNDLVLTWILHSIEPDIARSVIFSDTAAAVWSDLHDRFSQGD 138
Query: 109 QEREFTLCQQLTYLRKDETVPITTHIRQFKNICDSLAAIGRPIS-------------KKE 155
+ R + + Q+++ R+ + I+ + + K++ D L + PI+ +KE
Sbjct: 139 ESRIYQIRQEISECRQGSLL-ISDYYTKLKSLWDELGSYQEPITCSCDMLKKVAVREEKE 197
Query: 156 KIYSLLTSLGPQYETFTTTML 176
K+ L L Y ++L
Sbjct: 198 KVMQFLMGLNESYSQVRGSIL 218
>IMGA|Medtr5g086570.1 Ty1/copia-element polyprotein, related
chr05_pseudomolecule_IMGAG_V3 33221869-33220686 H
EGN_Mt090430 20090702
Length = 369
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 20/183 (10%)
Query: 60 NFTTWKKADRLLRGWIIGTLSEESLGLVIGLDTAFAVWNGLKESYSQVSQEREFTLCQQL 119
N+ W++AD ++ WII + TA +W L+E ++Q + R L + L
Sbjct: 98 NYVNWERADSMVTAWIINATDPVLHSSISHASTARDIWLDLEERFAQTNTPRIHQLWRNL 157
Query: 120 TYLRKDETVPITTHIRQFKNICDSLAAIGRPI--------------SKKEKIYSLLTSL- 164
+++D+ + +T QFK++ D L+ + +P+ ++++++ L SL
Sbjct: 158 CLMQEDDELSVTAFYTQFKSLLDELSEL-QPLPECTCGASKELMRMEEEQRLHLFLGSLD 216
Query: 165 GPQYETFTTTMLK-PPTPSYTELISQLQNHDQRRTWFTNTGNSALATRTPHLAFYAQSKR 223
+Y T++L P PS + + + GN+ + P AF++ S+
Sbjct: 217 NEKYGHVKTSILNVEPLPSLRRAFNHVLREEAHFPVEKEKGNNKM---DPGTAFHSYSEN 273
Query: 224 DQQ 226
Q+
Sbjct: 274 KQK 276
>IMGA|Medtr7g116810.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 27118605-27118065 H
EGN_Mt090430 20090702
Length = 141
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 687 RVFGCKCFPYIWDTRKNKFDPKSVLCVFAGYSDKYKGYRCYDIQNRKY 734
++FGC F YI ++K DP+++ CVF GYS KGY CY + KY
Sbjct: 10 KIFGCTSFVYIQSDGRSKLDPRALKCVFIGYSSTQKGYICYHPPSHKY 57