Jatropha Genome Database

JcCA0155011.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155011.40 + phase: 0 
         (133 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g098350.1 Mo-co oxidoreductase dimerisation domain ch...    78   1e-15
IMGA|Medtr3g098320.1 Oxidoreductase, molybdopterin binding chr03...    69   8e-13

>IMGA|Medtr3g098350.1 Mo-co oxidoreductase dimerisation domain
           chr03_pseudomolecule_IMGAG_V3 23787225-23783668 E
           EGN_Mt090430 20090702
          Length = 921

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 3/110 (2%)

Query: 20  LKINSKQPFNAEPPRSALVS-SYVTPVDLFYKRNHGPIPIVDDIERYSVTISGLIDRPRE 78
           L++  K PFN+EPP   LV   ++TPV L Y RNHGP+P     + +++ +SGL+  P +
Sbjct: 98  LRLTGKHPFNSEPPLQELVEHGFITPVPLHYVRNHGPVPKA-QWDSWTIEVSGLVKNPTQ 156

Query: 79  LFMKD-IWKLPKYNVTATLQCAGNRRTAMSNVRKVRGVGWDVSAIGNGLF 127
             M   I   P +    TL CAGNRR   + +++  G  W  + I   ++
Sbjct: 157 FTMAQLIDDFPSHEFPVTLVCAGNRRKEQNMIKQSIGFNWGAAGISTSVW 206


>IMGA|Medtr3g098320.1 Oxidoreductase, molybdopterin binding
           chr03_pseudomolecule_IMGAG_V3 23759428-23758413 E
           EGN_Mt090430 20090702
          Length = 321

 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 8/117 (6%)

Query: 16  RHPSL-KINSKQPFNAEPPRSALVS-SYVTPVDLFYKRNHGPIPIV--DDIERYSVTISG 71
           R+PSL ++  K PFN+EPP  +L+   ++TPV L Y RNHG +P    DD   +S+ ++G
Sbjct: 79  RNPSLIRLTGKHPFNSEPPLQSLMHHGFITPVPLHYVRNHGHVPKACWDD---WSIEVTG 135

Query: 72  LIDRPRELFMKD-IWKLPKYNVTATLQCAGNRRTAMSNVRKVRGVGWDVSAIGNGLF 127
           L+  P    M   I   P      TL C+ NRR   + V++  G  W  SA    ++
Sbjct: 136 LVKNPACFTMDQLINDFPSREFPVTLVCSANRRKEQNMVKQTIGFNWGPSATSTSVW 192