Jatropha Genome Database

JcCA0155001.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155001.30 - phase: 0 
         (609 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g025250.1 Carotenoid oxygenase chr05_pseudomolecule_I...   312   3e-85
IMGA|Medtr5g025270.1 Carotenoid oxygenase chr05_pseudomolecule_I...   310   2e-84
IMGA|Medtr5g025290.1 Carotenoid oxygenase chr05_pseudomolecule_I...   300   1e-81
IMGA|Medtr3g130620.1 Carotenoid oxygenase chr03_pseudomolecule_I...    78   1e-14

>IMGA|Medtr5g025250.1 Carotenoid oxygenase
           chr05_pseudomolecule_IMGAG_V3 10093326-10091325 E
           EGN_Mt090430 20090702
          Length = 578

 Score =  312 bits (800), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 187/525 (35%), Positives = 287/525 (54%), Gaps = 18/525 (3%)

Query: 85  QKTNFPIGLNPLQMLAASALDTIESSIILMLERNQVLPKSVDPVVQISGNFAPV-QEFPV 143
           + TN  +  + +  L  + LD I ++ I     +  +  SVDP   +S NFAPV  E P 
Sbjct: 60  KNTNKRLQTSSISALILNTLDDIINTFI-----DPPIKPSVDPRHVLSQNFAPVLDELPP 114

Query: 144 RHGLEVVGQIPECLRGVYLRNGANPVYEPKGGHHLFDGDGMIHAVTLGSGNQASYSCRYT 203
              + + G +P  L G Y+RNG NP + P+G +HLFDGDGM+HA+T+ +G +A+   RY 
Sbjct: 115 TQCVIIKGTLPPSLYGAYIRNGPNPQFLPRGPYHLFDGDGMLHAITISNG-KATLCSRYV 173

Query: 204 RTSRLEQEAALGRPLFPKPIGELHGPLGLA-RLMLFMARAGVGLVDGSRGSGVANAGLIY 262
           +T + + E   G  L P      +  + LA R  + +AR   G  + S G G+ N  L  
Sbjct: 174 KTYKYKIENKAGHQLIPNVFSGFNSLIALAARGSVVVARVLTGQYNPSNGIGLVNTSLAL 233

Query: 263 FNGRLLAMSEEDLPYQVKIIDDGDLETVGRFSFHNQLDGPMIAHPKVDPITGDLHALSCN 322
           F  RL A+ E DLPY+VK+  +GD++T+GR+ F+ +L   M AHPK+D  T +  A    
Sbjct: 234 FGNRLFALGESDLPYEVKLTPNGDIQTMGRYDFNGKLLMSMTAHPKIDSDTSECFAFRYG 293

Query: 323 VIKKPYLKYIKFDKHGKKSRDLSI-TLDQPTMIHDFAVSRNFVIIPDHQVVFKLTEMIRG 381
            I +P+L Y +FD +G K  D+ + ++ +P+ +HDFA+++ + +  D Q+      MI G
Sbjct: 294 PI-RPFLTYFRFDSNGVKHNDVPVFSMKRPSFLHDFAITKKYAVFADIQLEMNPLGMIFG 352

Query: 382 GSPVIYDKEKTSRFGILSKNDMSESRIQWVDVPNCFCFHLYNAWEEISDNGDDIIVVIGS 441
           GSPV  D  K SR GIL +    ES+++W DVP     H  NAW+E  ++G  + +V  +
Sbjct: 353 GSPVRSDPSKVSRIGILPRYANDESKMKWFDVPGFNIMHTINAWDE--EDGGTVTLVATN 410

Query: 442 CMNPPDSMFSESEIPVQIELTEIRFNLRAGESTMKTLVSGMNLEVGVVNRKLLGEKTQFV 501
            ++    M     I   IE  ++R N+  G  T + L S  NL++ V+N   LG+K++FV
Sbjct: 411 ILSVQHVMERMDLIHAMIE--KVRINVETGLVTRQPL-SARNLDLAVINNDFLGKKSRFV 467

Query: 502 YLAIAEPWPKCCGIARVDLETG-EVTXXXXXXXXXXXXXXXVAXXXXXXXXXXYIIGYVR 560
           Y AI  P PK  G+ ++D+  G EV                VA          Y++ YV 
Sbjct: 468 YAAIGNPMPKFSGVVKIDVLKGEEVGCRLYGEGCYGGEPFFVAMEGGEEEDDGYLVSYVH 527

Query: 561 DEIKEKSELVIVNAL--DMEQVASVRLPSRVPYGFHGTFVTEDEL 603
           DE K +S+ ++++A   + E VA V+LP RVPYGFHG FV + ++
Sbjct: 528 DEKKGESKFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLFVKQSDI 572


>IMGA|Medtr5g025270.1 Carotenoid oxygenase
           chr05_pseudomolecule_IMGAG_V3 10102084-10100345 E
           EGN_Mt090430 20090702
          Length = 579

 Score =  310 bits (793), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 187/523 (35%), Positives = 287/523 (54%), Gaps = 18/523 (3%)

Query: 87  TNFPIGLNPLQMLAASALDTIESSIILMLERNQVLPKSVDPVVQISGNFAPV-QEFPVRH 145
           TN  +  + +  L  + LD I ++ I     +  +  SVDP   +S NFAPV  E P   
Sbjct: 63  TNKTLQTSSISALILNTLDDIINTFI-----DPPIKPSVDPRHVLSQNFAPVLDELPPTQ 117

Query: 146 GLEVVGQIPECLRGVYLRNGANPVYEPKGGHHLFDGDGMIHAVTLGSGNQASYSCRYTRT 205
              + G +P  L GVY+RNG NP + P+G +HLFDGDGM+HAV + +G +A+   RY +T
Sbjct: 118 CKVIKGTLPPSLNGVYIRNGPNPQFLPRGPYHLFDGDGMLHAVKITNG-KATLCSRYVQT 176

Query: 206 SRLEQEAALGRPLFPKPIGELHGPLGLA-RLMLFMARAGVGLVDGSRGSGVANAGLIYFN 264
            + + E   G  + P      +  +GLA R  + +AR   G  +   G G+ N  L  F 
Sbjct: 177 YKYKIENEAGYQILPNVFSGFNSLIGLAARGSVAVARVLTGQYNPINGIGLINTSLALFG 236

Query: 265 GRLLAMSEEDLPYQVKIIDDGDLETVGRFSFHNQLDGPMIAHPKVDPITGDLHALSCNVI 324
            RL A+ E DLPY++K+  +GD++T+GR+ F+ +L   M AHPK+D  TG+  A    +I
Sbjct: 237 NRLFALGESDLPYEIKVTPNGDIQTIGRYDFNGKLFMNMTAHPKIDSDTGECFAYRYGLI 296

Query: 325 KKPYLKYIKFDKHGKKSRDLSI-TLDQPTMIHDFAVSRNFVIIPDHQVVFKLTEMIRGGS 383
            +P+L Y +FD +G K  D+ + ++ +P+ +HDFA+++ + +  D Q+     +MI GGS
Sbjct: 297 -RPFLTYFRFDSNGVKHNDVPVFSMKRPSFLHDFAITKKYALFADIQLEINPLDMIFGGS 355

Query: 384 PVIYDKEKTSRFGILSKNDMSESRIQWVDVPNCFCFHLYNAWEEISDNGDDIIVVIGSCM 443
           PV  D  K  R GIL +   +ES+++W DVP     HL NAW+E  ++G  + +V  + +
Sbjct: 356 PVRSDPSKVPRIGILPRYADNESKMKWFDVPGLNIMHLINAWDE--EDGKTVTIVAPNIL 413

Query: 444 NPPDSMFSESEIPVQIELTEIRFNLRAGESTMKTLVSGMNLEVGVVNRKLLGEKTQFVYL 503
                M     I   IE  ++R N+  G  T + L S  NL++ V+N + LG+K +F+Y 
Sbjct: 414 CVEHMMERLELIHEMIE--KVRINVETGIVTRQPL-SARNLDLAVINNEFLGKKHRFIYA 470

Query: 504 AIAEPWPKCCGIARVDLETG-EVTXXXXXXXXXXXXXXXVAXXXXXXXXXXYIIGYVRDE 562
           AI  P PK  G+ ++D+  G EV                VA          Y++ YV DE
Sbjct: 471 AIGNPMPKFSGVVKIDVLKGEEVGCRLYGEDCYGGEPFFVAREDGEEEDDGYLVSYVHDE 530

Query: 563 IKEKSELVIVNAL--DMEQVASVRLPSRVPYGFHGTFVTEDEL 603
            K +S  ++++A   + E VA V+LP RVPYGFHG FV E ++
Sbjct: 531 KKGESRFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLFVKESDI 573


>IMGA|Medtr5g025290.1 Carotenoid oxygenase
           chr05_pseudomolecule_IMGAG_V3 10116366-10118405 E
           EGN_Mt090430 20090702
          Length = 581

 Score =  300 bits (769), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 172/486 (35%), Positives = 269/486 (55%), Gaps = 12/486 (2%)

Query: 124 SVDPVVQISGNFAPV-QEFPVRHGLEVVGQIPECLRGVYLRNGANPVYEPKGGHHLFDGD 182
           SVDP   +S NFAPV  E P      + G +P  L GVY+RNG NP + P+G +HLFDGD
Sbjct: 96  SVDPRHVLSQNFAPVLDELPPTQCKVIKGTLPPSLNGVYIRNGPNPQFLPRGPYHLFDGD 155

Query: 183 GMIHAVTLGSGNQASYSCRYTRTSRLEQEAALGRPLFPKPIGELHGPLG-LARLMLFMAR 241
           GM+HA+T+ +G +A+   RY +T + + E   G  L P      +  +   AR  +  AR
Sbjct: 156 GMLHAITISNG-KATLCSRYVQTYKYKIENEAGYQLIPNVFSGFNSLIASAARGSVTAAR 214

Query: 242 AGVGLVDGSRGSGVANAGLIYFNGRLLAMSEEDLPYQVKIIDDGDLETVGRFSFHNQLDG 301
              G  + S G G+AN  L  F  +L A+ E DLPY++ +  +GD++T+GR+ F+ +L  
Sbjct: 215 VISGQYNPSNGIGLANTSLALFGNKLFALGESDLPYEINLTPNGDIQTIGRYDFNGKLSM 274

Query: 302 PMIAHPKVDPITGDLHALSCNVIKKPYLKYIKFDKHGKKSRDLSI-TLDQPTMIHDFAVS 360
            M AHPK+D  TG+  A     +  P+L Y +FD +G K  D+ + ++ +P+ +HDFA++
Sbjct: 275 SMTAHPKIDGDTGETFAFRYGPM-PPFLTYFRFDANGVKHNDVPVFSMTRPSFLHDFAIT 333

Query: 361 RNFVIIPDHQVVFKLTEMIRGGSPVIYDKEKTSRFGILSKNDMSESRIQWVDVPNCFCFH 420
           + + +  D Q+     +MI GGSPV  D  K SR GIL +    ES+++W DVP     H
Sbjct: 334 KKYAVFTDIQLGMNPLDMISGGSPVGSDPSKVSRIGILPRYASDESKMKWFDVPGFNIMH 393

Query: 421 LYNAWEEISDNGDDIIVVIGSCMNPPDSMFSESEIPVQIELTEIRFNLRAGESTMKTLVS 480
             N+W+   D+ + + ++  + ++   +M     +   IE  +++ N++ G  + + L S
Sbjct: 394 AINSWDG-EDDEETVTLIAPNVLSIEHTMERLELVHAMIE--KVKINIKTGIVSRQPL-S 449

Query: 481 GMNLEVGVVNRKLLGEKTQFVYLAIAEPWPKCCGIARVDLETG-EVTXXXXXXXXXXXXX 539
             NL+  V+N   +G+K +FVY AI  P PK  G+ ++D+  G EV              
Sbjct: 450 ARNLDFAVINGDYMGKKNRFVYAAIGNPMPKISGVVKIDVLKGEEVGCRLYGEGCYGGEP 509

Query: 540 XXVAXXXXXXXXXXYIIGYVRDEIKEKSELVIVNAL--DMEQVASVRLPSRVPYGFHGTF 597
             VA          Y++ YV DE K +S+ ++++A   + E VA V+LP RVPYGFHG F
Sbjct: 510 FFVAREDGEEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLF 569

Query: 598 VTEDEL 603
           V E ++
Sbjct: 570 VKESDI 575


>IMGA|Medtr3g130620.1 Carotenoid oxygenase
           chr03_pseudomolecule_IMGAG_V3 33198267-33194913 E
           EGN_Mt090430 20090702
          Length = 565

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 112/494 (22%), Positives = 200/494 (40%), Gaps = 70/494 (14%)

Query: 147 LEVVGQIPECLRGVYLRNGANPVYEPKGGH---HLFDGDGMIHAVTLGSGNQASYSCRYT 203
           L V G IP  L+G Y+RNG  P     G +   HLFDG   +  +    G   +      
Sbjct: 97  LLVQGHIPLWLKGTYIRNG--PGMWNIGDYNFRHLFDGYATLVGLHFEDGRLVA--GHRQ 152

Query: 204 RTSRLEQEAALGRPLFPKPIGELHGPLGLARLMLFMARAG--VGLVDGSRGSGVANAGLI 261
             S+  Q A   + +  +   E+       +   F+A  G    L  GS  +  AN G++
Sbjct: 153 VESQAYQAAKKNQKICYREFSEV------PKAENFLAYVGELANLFSGSSLTDNANTGVV 206

Query: 262 YF-NGRLLAMSEEDLPYQVKIIDDGDLETVGRFSFHNQLDGPM-IAHPKVDPITGDLHAL 319
              +GR++ ++E        +ID   LET+G+F + + L G +  AHP V     +   L
Sbjct: 207 KLGDGRVVCLTETQ--KGSIVIDPDTLETIGKFDYSDSLGGLIHSAHPIV--TDNEFLTL 262

Query: 320 SCNVIKKPYLKYIKFDKHGKKSRDLSITLD-----QPTMIHDFAVSRNFVIIPDHQVVFK 374
             +++K  YL  +   + G   R +   +D      P  +H F V+ ++VI+P+  + + 
Sbjct: 263 IPDLVKPGYL--VARMEPGSNERKVIGRVDCRGGTSPGWVHSFPVTEHYVIVPEMPLRYC 320

Query: 375 LTEMIRGGSPVIYD----KEKTSRFGILSKNDMSESRIQWVDVPNCFCFHLYNAWEEISD 430
              ++R     +Y      E  +   ++ K   S   +  V+VP    FH  NA+EE  +
Sbjct: 321 AQNLLRAEPTPLYKFQWHPESKAFMHVMCKT--SGKIVASVEVPLFVTFHFINAYEEEDE 378

Query: 431 NGDDIIVVIGSCMNPPDSMFSESEIPVQIELTEIR-FN-------LRAG----------- 471
           +G    V+   C +      S ++I  ++ L  +R FN        R G           
Sbjct: 379 DGRVTAVIADCCEHN-----SNTDILDKLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPY 433

Query: 472 ---ESTMKTLVSGMNLEVGVVNRKLLGEKTQFVYLAIAEPWPKCCG----IARVDLETGE 524
              ++ +     G  +++  +N   LG K ++ Y   A+   + C     + ++DL++ E
Sbjct: 434 GTLDAALDPNEHGKGMDMCSINPNYLGLKYRYAYACGAQ---RPCNFPNTLTKIDLQS-E 489

Query: 525 VTXXXXXXXXXXXXXXXVAXXXXXXXXXXYIIGYVRDEIKEKSELVIVNALDMEQVASVR 584
                            V            +I  + ++  E   LV+ +    E++A  +
Sbjct: 490 RAKNWYEEGAVPSEPFFVPRPGATKEDDGVVISIISEKNGEGYALVL-DGSTFEEIARAK 548

Query: 585 LPSRVPYGFHGTFV 598
            P  +PYG HG +V
Sbjct: 549 FPYGLPYGLHGCWV 562