Jatropha Genome Database

JcCA0154801.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154801.40 + phase: 0 
         (234 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g143990.1 Isopenicillin N synthetase; GRAM chr01_pseu...   228   1e-60
IMGA|Medtr7g096590.1 GRAM chr07_pseudomolecule_IMGAG_V3 21643694...   155   2e-38
IMGA|Medtr3g148890.1 GRAM chr03_pseudomolecule_IMGAG_V3 38816524...   140   8e-34
IMGA|Medtr2g092150.1 GRAM chr02_pseudomolecule_IMGAG_V3 20964531...   125   3e-29
IMGA|Medtr1g143980.1 hypothetical protein chr01_pseudomolecule_I...    97   5e-21
IMGA|Medtr8g081620.1 GRAM chr08_pseudomolecule_IMGAG_V3 16784330...    80   8e-16
IMGA|Medtr8g081610.1 GLABRA2 expression modulator, putative chr0...    65   2e-11

>IMGA|Medtr1g143990.1 Isopenicillin N synthetase; GRAM
           chr01_pseudomolecule_IMGAG_V3 32004369-32005386 E
           EGN_Mt090430 20090702
          Length = 222

 Score =  228 bits (582), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 119/226 (52%), Positives = 158/226 (69%), Gaps = 17/226 (7%)

Query: 5   TQEQVIGIPIT--SAANAVERMPRILLLENAAPT--YVPTPANKSLAVKQDKVDSVLKRM 60
             E V+G PI      N++ R     LL +A+    Y     +KSL     K        
Sbjct: 6   NHELVVGTPIIYHQFQNSINR----YLLGSASHQCQYPSKHQSKSLTNSNKK-------- 53

Query: 61  NKLGKKADKFAHGIREHVRLGAKITETLKGKLSLGARILQVGGVKKVFRQLFTVREGEKL 120
            +L +KAD  +  ++EHVR+GA I++T+K  LSLGA+ILQ+GGV+KVF Q F+V EGE+L
Sbjct: 54  -RLARKADSLSQRVQEHVRVGANISKTIKRTLSLGAQILQMGGVEKVFTQYFSVTEGERL 112

Query: 121 LKACQCYLSTTAGPIAGLVFISTDKIAFCSERSIKLSSTEGKIARIHYKVVIPLRKIKTA 180
            K  QCYLSTT+GP+AGL+FIS +K+AFCSERSIK+ + +G++ RI YKV IPL+KIK  
Sbjct: 113 SKVSQCYLSTTSGPLAGLLFISNEKVAFCSERSIKVFNQKGQMRRIRYKVAIPLKKIKCV 172

Query: 181 NQTENVKKPSQKYIEIVTVDDFDFWLMGFLNYQKAFKCLQQAISQA 226
            Q++NV+KP+QKYI IVT+D+FDFWLMG L YQK FK ++QAISQA
Sbjct: 173 RQSQNVEKPTQKYINIVTMDNFDFWLMGVLKYQKTFKYIEQAISQA 218


>IMGA|Medtr7g096590.1 GRAM chr07_pseudomolecule_IMGAG_V3
           21643694-21640713 E EGN_Mt090430 20090702
          Length = 288

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 117/201 (58%), Gaps = 3/201 (1%)

Query: 25  PRILLLENAAPTYVPTPANKSLAVKQDKVDSVLKRMNKLGKKADKFAHGIREHVRLGAKI 84
           P++   +   P    +P +K        ++S+L   +   KKA+  A+ I  +++ G  +
Sbjct: 79  PQVHYYQQDHPYVQHSPVDKP---SSSPMESILHMFDSWSKKAEATANNIWHNLKTGPSV 135

Query: 85  TETLKGKLSLGARILQVGGVKKVFRQLFTVREGEKLLKACQCYLSTTAGPIAGLVFISTD 144
           +    GK++L  + +  GG + +++Q+FT    EKL K   CYLSTT GP+AG +++S  
Sbjct: 136 SSAAMGKMNLTVKAISEGGFESLYKQIFTTYPNEKLKKTFACYLSTTTGPVAGTLYLSDI 195

Query: 145 KIAFCSERSIKLSSTEGKIARIHYKVVIPLRKIKTANQTENVKKPSQKYIEIVTVDDFDF 204
            +AFCS+R +  ++  G++   +YKV++PL KI T N     +  S++YI+IVTVD  DF
Sbjct: 196 HLAFCSDRPLSFTAPSGQVTWSYYKVMVPLGKIGTVNPVIMRENHSERYIQIVTVDGHDF 255

Query: 205 WLMGFLNYQKAFKCLQQAISQ 225
           W MGF+NY KA K L + IS 
Sbjct: 256 WFMGFVNYDKAVKNLSEGISH 276


>IMGA|Medtr3g148890.1 GRAM chr03_pseudomolecule_IMGAG_V3
           38816524-38820973 F EGN_Mt090430 20090702
          Length = 258

 Score =  140 bits (352), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 14/214 (6%)

Query: 17  AANAVERMPRILLLENAAPTYVPTPANKSLAVKQDKVDSVLKRMNKLGKKAD-------K 69
           A +A   MP       + P   P P     + K + +DSV   + K GKKA         
Sbjct: 49  ATDAATTMPA-----ESNPYVSPAPVPAPTSAK-NTLDSVKDVLGKWGKKAAEATKKAED 102

Query: 70  FAHGIREHVRLGAKITETLKGKLSLGARILQVGGVKKVFRQLFTVREGEKLLKACQCYLS 129
            A  + +H++ G    +   G+++ G ++L  GG +K+FRQ F     E+LLK   CYLS
Sbjct: 103 LAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLLKTYACYLS 162

Query: 130 TTAGPIAGLVFISTDKIAFCSERSIKLSSTEGKIARIHYKVVIPLRKIKTANQTENVKKP 189
           T+AGP+ G++++ST K+AFCS+  +    T  +    +YKVVIPL +++  N + +   P
Sbjct: 163 TSAGPVMGVLYLSTAKLAFCSDNPLSY-QTGDQTQWSYYKVVIPLHQLRAVNPSTSKANP 221

Query: 190 SQKYIEIVTVDDFDFWLMGFLNYQKAFKCLQQAI 223
           ++K+I+I++VD+ +FW MGF+ Y  A K +Q+A+
Sbjct: 222 TEKFIQIISVDNHEFWFMGFVYYDSAVKHIQEAL 255


>IMGA|Medtr2g092150.1 GRAM chr02_pseudomolecule_IMGAG_V3
           20964531-20962644 E EGN_Mt090430 20090702
          Length = 241

 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 10/202 (4%)

Query: 40  TPANKSLAV--KQDKVDSVLKRMNKLGKK-------ADKFAHGIREHVRLGAKITETLKG 90
           +PAN S A   + + +D V   +N   +K       A+     I  HVR+ +   +    
Sbjct: 32  SPANPSSAAANRPNPMDKVSGAINNCSRKVGEATRHAENMVDSIWNHVRMSSSPADAAMA 91

Query: 91  KLSLGARILQVGGVKKVFRQLFTVREGEKLLKACQCYLSTTA-GPIAGLVFISTDKIAFC 149
           +L  G +++  GG +K+F+Q F V  GEKLLK   CY+STTA GP+ G ++I+T ++AFC
Sbjct: 92  RLVQGTKVIANGGSEKLFQQTFGVFSGEKLLKQYVCYISTTASGPVIGTLYITTKRLAFC 151

Query: 150 SERSIKLSSTEGKIARIHYKVVIPLRKIKTANQTENVKKPSQKYIEIVTVDDFDFWLMGF 209
           S+  +       +   ++YKVVI L ++ T     N     +KYIEI TVD ++F  MGF
Sbjct: 152 SDYPMCHHPFSLQHQCLYYKVVIQLGQLGTVTPATNRFNSREKYIEIFTVDGYEFLFMGF 211

Query: 210 LNYQKAFKCLQQAISQAWTNAS 231
           ++Y +A K L + + Q   ++S
Sbjct: 212 VSYDRALKTLNEVLHQYGNHSS 233


>IMGA|Medtr1g143980.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 32003022-32003799 E
           EGN_Mt090430 20090702
          Length = 76

 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 163 IARIHYKVVIPLRKIKTANQTENVKKPSQKYIEIVTVDDFDFWLMGFLNYQKAFKCLQQA 222
           + RI YKV IPL+K+K   Q++NV+KP+QKYI IVTVD+FDFWLMG L YQK FK L+QA
Sbjct: 1   MCRIRYKVAIPLKKVKCVRQSQNVEKPTQKYINIVTVDNFDFWLMGVLKYQKTFKYLEQA 60

Query: 223 ISQA 226
           ISQ+
Sbjct: 61  ISQS 64


>IMGA|Medtr8g081620.1 GRAM chr08_pseudomolecule_IMGAG_V3
           16784330-16778274 E EGN_Mt090430 20090702
          Length = 254

 Score = 80.1 bits (196), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 5/125 (4%)

Query: 53  VDSVLKRMN-KLG---KKADKFAHGIREHVRLGAKITETLKGKLSLGARILQVGGVKKVF 108
           V +VL R + K+G   KKA+  A    +H++    + E   G+++ G ++L  GG +K+F
Sbjct: 94  VRNVLGRWSRKVGEATKKAETLAGNTWQHLKTSPSMAEAAMGRIAQGTKVLAEGGYEKIF 153

Query: 109 RQLFTVREGEKLLKACQCYLSTTAGPIAGLVFISTDKIAFCSERSIKLSSTEGKIARIHY 168
              F     E+L  +  CYLST+AGP+ G+++IST KIA+ S+  I   + E K    +Y
Sbjct: 154 LSTFDTVPEERLQNSFACYLSTSAGPVMGVLYISTAKIAYSSDSPISYKN-EDKTEWSYY 212

Query: 169 KVVIP 173
           K   P
Sbjct: 213 KKTFP 217


>IMGA|Medtr8g081610.1 GLABRA2 expression modulator, putative
           chr08_pseudomolecule_IMGAG_V3 16776453-16775963 H
           EGN_Mt090430 20090702
          Length = 74

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 39/58 (67%)

Query: 166 IHYKVVIPLRKIKTANQTENVKKPSQKYIEIVTVDDFDFWLMGFLNYQKAFKCLQQAI 223
           I +  VIPL ++K  N + N   P++KYI++++VD+ +FW MGFLNY  A   LQ A+
Sbjct: 7   ISWLSVIPLHELKAVNPSSNTANPAEKYIQVISVDNHEFWFMGFLNYDNAVGFLQDAL 64