Jatropha Genome Database

JcCA0154801.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154801.20 + phase: 0 
         (223 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g143990.1 Isopenicillin N synthetase; GRAM chr01_pseu...   213   5e-56
IMGA|Medtr7g096590.1 GRAM chr07_pseudomolecule_IMGAG_V3 21643694...   161   2e-40
IMGA|Medtr3g148890.1 GRAM chr03_pseudomolecule_IMGAG_V3 38816524...   157   4e-39
IMGA|Medtr2g092150.1 GRAM chr02_pseudomolecule_IMGAG_V3 20964531...   127   4e-30
IMGA|Medtr1g143980.1 hypothetical protein chr01_pseudomolecule_I...    90   7e-19
IMGA|Medtr8g081620.1 GRAM chr08_pseudomolecule_IMGAG_V3 16784330...    86   1e-17
IMGA|Medtr8g081610.1 GLABRA2 expression modulator, putative chr0...    73   9e-14

>IMGA|Medtr1g143990.1 Isopenicillin N synthetase; GRAM
           chr01_pseudomolecule_IMGAG_V3 32004369-32005386 E
           EGN_Mt090430 20090702
          Length = 222

 Score =  213 bits (543), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 113/219 (51%), Positives = 147/219 (67%), Gaps = 17/219 (7%)

Query: 9   VIGIPI------KSVSRSPAVGYLPEPVDTQCRTSCSANGSNVAGKTDSMLKRINKLGKK 62
           V+G PI       S++R     YL      QC+        ++   T+S  KR   L +K
Sbjct: 10  VVGTPIIYHQFQNSINR-----YLLGSASHQCQYPSKHQSKSL---TNSNKKR---LARK 58

Query: 63  ADNFTNCVLEHVRLGPKITETLRGKLRLGAKILQVGGVERIFRQLFPFSEDEKLLKASQC 122
           AD+ +  V EHVR+G  I++T++  L LGA+ILQ+GGVE++F Q F  +E E+L K SQC
Sbjct: 59  ADSLSQRVQEHVRVGANISKTIKRTLSLGAQILQMGGVEKVFTQYFSVTEGERLSKVSQC 118

Query: 123 YLSTTAGPIAGLLFISTHKVAFCSERSIKFSTPNGKSVRLYYKVLIPLRKIKSVNESENV 182
           YLSTT+GP+AGLLFIS  KVAFCSERSIK     G+  R+ YKV IPL+KIK V +S+NV
Sbjct: 119 YLSTTSGPLAGLLFISNEKVAFCSERSIKVFNQKGQMRRIRYKVAIPLKKIKCVRQSQNV 178

Query: 183 KKPSQKYMEIVTVDNFEFWFMGFLNYQKALKYIQQAISH 221
           +KP+QKY+ IVT+DNF+FW MG L YQK  KYI+QAIS 
Sbjct: 179 EKPTQKYINIVTMDNFDFWLMGVLKYQKTFKYIEQAISQ 217


>IMGA|Medtr7g096590.1 GRAM chr07_pseudomolecule_IMGAG_V3
           21643694-21640713 E EGN_Mt090430 20090702
          Length = 288

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 111/172 (64%)

Query: 50  DSMLKRINKLGKKADNFTNCVLEHVRLGPKITETLRGKLRLGAKILQVGGVERIFRQLFP 109
           +S+L   +   KKA+   N +  +++ GP ++    GK+ L  K +  GG E +++Q+F 
Sbjct: 105 ESILHMFDSWSKKAEATANNIWHNLKTGPSVSSAAMGKMNLTVKAISEGGFESLYKQIFT 164

Query: 110 FSEDEKLLKASQCYLSTTAGPIAGLLFISTHKVAFCSERSIKFSTPNGKSVRLYYKVLIP 169
              +EKL K   CYLSTT GP+AG L++S   +AFCS+R + F+ P+G+    YYKV++P
Sbjct: 165 TYPNEKLKKTFACYLSTTTGPVAGTLYLSDIHLAFCSDRPLSFTAPSGQVTWSYYKVMVP 224

Query: 170 LRKIKSVNESENVKKPSQKYMEIVTVDNFEFWFMGFLNYQKALKYIQQAISH 221
           L KI +VN     +  S++Y++IVTVD  +FWFMGF+NY KA+K + + ISH
Sbjct: 225 LGKIGTVNPVIMRENHSERYIQIVTVDGHDFWFMGFVNYDKAVKNLSEGISH 276


>IMGA|Medtr3g148890.1 GRAM chr03_pseudomolecule_IMGAG_V3
           38816524-38820973 F EGN_Mt090430 20090702
          Length = 258

 Score =  157 bits (397), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 108/158 (68%), Gaps = 1/158 (0%)

Query: 65  NFTNCVLEHVRLGPKITETLRGKLRLGAKILQVGGVERIFRQLFPFSEDEKLLKASQCYL 124
           +    + +H++ GP   +   G++  G K+L  GG E+IFRQ F    +E+LLK   CYL
Sbjct: 102 DLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLLKTYACYL 161

Query: 125 STTAGPIAGLLFISTHKVAFCSERSIKFSTPNGKSVRLYYKVLIPLRKIKSVNESENVKK 184
           ST+AGP+ G+L++ST K+AFCS+  + + T   ++   YYKV+IPL ++++VN S +   
Sbjct: 162 STSAGPVMGVLYLSTAKLAFCSDNPLSYQT-GDQTQWSYYKVVIPLHQLRAVNPSTSKAN 220

Query: 185 PSQKYMEIVTVDNFEFWFMGFLNYQKALKYIQQAISHR 222
           P++K+++I++VDN EFWFMGF+ Y  A+K+IQ+A+  R
Sbjct: 221 PTEKFIQIISVDNHEFWFMGFVYYDSAVKHIQEALQSR 258


>IMGA|Medtr2g092150.1 GRAM chr02_pseudomolecule_IMGAG_V3
           20964531-20962644 E EGN_Mt090430 20090702
          Length = 241

 Score =  127 bits (319), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 112/189 (59%), Gaps = 5/189 (2%)

Query: 36  TSCSANGSN----VAGKTDSMLKRINKLGKKADNFTNCVLEHVRLGPKITETLRGKLRLG 91
           +S +AN  N    V+G  ++  +++ +  + A+N  + +  HVR+     +    +L  G
Sbjct: 37  SSAAANRPNPMDKVSGAINNCSRKVGEATRHAENMVDSIWNHVRMSSSPADAAMARLVQG 96

Query: 92  AKILQVGGVERIFRQLFPFSEDEKLLKASQCYLSTTA-GPIAGLLFISTHKVAFCSERSI 150
            K++  GG E++F+Q F     EKLLK   CY+STTA GP+ G L+I+T ++AFCS+  +
Sbjct: 97  TKVIANGGSEKLFQQTFGVFSGEKLLKQYVCYISTTASGPVIGTLYITTKRLAFCSDYPM 156

Query: 151 KFSTPNGKSVRLYYKVLIPLRKIKSVNESENVKKPSQKYMEIVTVDNFEFWFMGFLNYQK 210
                + +   LYYKV+I L ++ +V  + N     +KY+EI TVD +EF FMGF++Y +
Sbjct: 157 CHHPFSLQHQCLYYKVVIQLGQLGTVTPATNRFNSREKYIEIFTVDGYEFLFMGFVSYDR 216

Query: 211 ALKYIQQAI 219
           ALK + + +
Sbjct: 217 ALKTLNEVL 225


>IMGA|Medtr1g143980.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 32003022-32003799 E
           EGN_Mt090430 20090702
          Length = 76

 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 50/61 (81%)

Query: 161 RLYYKVLIPLRKIKSVNESENVKKPSQKYMEIVTVDNFEFWFMGFLNYQKALKYIQQAIS 220
           R+ YKV IPL+K+K V +S+NV+KP+QKY+ IVTVDNF+FW MG L YQK  KY++QAIS
Sbjct: 3   RIRYKVAIPLKKVKCVRQSQNVEKPTQKYINIVTVDNFDFWLMGVLKYQKTFKYLEQAIS 62

Query: 221 H 221
            
Sbjct: 63  Q 63


>IMGA|Medtr8g081620.1 GRAM chr08_pseudomolecule_IMGAG_V3
           16784330-16778274 E EGN_Mt090430 20090702
          Length = 254

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 44  NVAGKTDSMLKRINKLGKKADNFTNCVLEHVRLGPKITETLRGKLRLGAKILQVGGVERI 103
           NV G+     +++ +  KKA+       +H++  P + E   G++  G K+L  GG E+I
Sbjct: 96  NVLGR---WSRKVGEATKKAETLAGNTWQHLKTSPSMAEAAMGRIAQGTKVLAEGGYEKI 152

Query: 104 FRQLFPFSEDEKLLKASQCYLSTTAGPIAGLLFISTHKVAFCSERSIKFSTPNGKSVRLY 163
           F   F    +E+L  +  CYLST+AGP+ G+L+IST K+A+ S+  I +   + K+   Y
Sbjct: 153 FLSTFDTVPEERLQNSFACYLSTSAGPVMGVLYISTAKIAYSSDSPISYKNED-KTEWSY 211

Query: 164 YKVLIP 169
           YK   P
Sbjct: 212 YKKTFP 217


>IMGA|Medtr8g081610.1 GLABRA2 expression modulator, putative
           chr08_pseudomolecule_IMGAG_V3 16776453-16775963 H
           EGN_Mt090430 20090702
          Length = 74

 Score = 73.2 bits (178), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/53 (50%), Positives = 42/53 (79%)

Query: 167 LIPLRKIKSVNESENVKKPSQKYMEIVTVDNFEFWFMGFLNYQKALKYIQQAI 219
           +IPL ++K+VN S N   P++KY+++++VDN EFWFMGFLNY  A+ ++Q A+
Sbjct: 12  VIPLHELKAVNPSSNTANPAEKYIQVISVDNHEFWFMGFLNYDNAVGFLQDAL 64