Jatropha Genome Database
- JcCA0154801.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0154801.10 + phase: 0
(198 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g073480.1 Myb-like DNA-binding region, SHAQKYF class;... 122 9e-29
IMGA|AC233577_45.1 Myb-like DNA-binding region, SHAQKYF class; H... 106 6e-24
IMGA|Medtr5g078240.1 Homeodomain-related; chr05_pseudomolecule_I... 104 2e-23
IMGA|Medtr5g089190.1 Homeodomain-related; chr05_pseudomolecule_I... 99 2e-21
IMGA|Medtr4g012540.1 Myb-like DNA-binding region, SHAQKYF class;... 91 3e-19
IMGA|Medtr8g105400.1 Myb-like DNA-binding region, SHAQKYF class;... 89 1e-18
IMGA|Medtr4g160800.1 Interleukin-6/G-CSF/MGF; Myb-like DNA-bindi... 87 4e-18
IMGA|Medtr5g027740.1 Homeodomain-related chr05_pseudomolecule_IM... 84 3e-17
IMGA|Medtr5g095050.1 Homeodomain-related chr05_pseudomolecule_IM... 82 1e-16
IMGA|Medtr5g095110.1 Homeodomain-related chr05_pseudomolecule_IM... 80 5e-16
IMGA|Medtr5g038100.1 Zinc finger, CCHC-type; Homeodomain-related... 79 1e-15
IMGA|Medtr5g027730.1 Homeodomain-related chr05_pseudomolecule_IM... 70 6e-13
IMGA|Medtr3g140030.1 Homeodomain-related chr03_pseudomolecule_IM... 69 2e-12
IMGA|Medtr1g099710.1 Myb-like DNA-binding region, SHAQKYF class;... 61 4e-10
IMGA|Medtr3g093140.1 Myb-like DNA-binding region, SHAQKYF class;... 55 2e-08
IMGA|Medtr3g140030.2 Homeodomain-related chr03_pseudomolecule_IM... 51 4e-07
IMGA|Medtr8g087470.1 Myb-like DNA-binding region, SHAQKYF class;... 50 5e-07
IMGA|Medtr5g083570.1 Homeodomain-related chr05_pseudomolecule_IM... 50 8e-07
IMGA|Medtr8g087540.1 Homeodomain-related chr08_pseudomolecule_IM... 49 2e-06
IMGA|Medtr5g083610.1 Homeodomain-related chr05_pseudomolecule_IM... 48 3e-06
>IMGA|Medtr8g073480.1 Myb-like DNA-binding region, SHAQKYF class;
Homeodomain-like; chr08_pseudomolecule_IMGAG_V3
14339736-14342896 H EGN_Mt090430 20090702
Length = 290
Score = 122 bits (307), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSM--NKDRRRSSIHDITS 84
LFL GL+ +G GDWRSISR VVTRTPTQVASHAQKY IR +SM K+RRRSSIHD+T
Sbjct: 115 LFLQGLENHGWGDWRSISRYSVVTRTPTQVASHAQKYKIRQDSMKEKKERRRSSIHDVTF 174
Query: 85 VGNGDISAPQGPITGQTNXXXXXXXXXXXXXQPPQHXXXXXXXXXXXXXXXXXXXXXXL- 143
V NGDISAPQGPITGQ + PP +
Sbjct: 175 VKNGDISAPQGPITGQASNSAANSAGQSAEQAPPVPPAGIKTLDNPPSPPAGIHAAPRIG 234
Query: 144 -------VSAVGTPVNLPAPAHMAY 161
VSAVGT VNL AP M Y
Sbjct: 235 QPIGGPVVSAVGTTVNLTAPGDMDY 259
>IMGA|AC233577_45.1 Myb-like DNA-binding region, SHAQKYF class;
Homeodomain-like AC233577.5 206855-206079 E
EGN_Mt090430 20090702
Length = 114
Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 57/67 (85%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
LFL+GL K+GKGDWRSISRN VVTRTPTQVASHAQKYF+R NS+ K+R+RSSIHDITSV
Sbjct: 3 LFLIGLTKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITSVD 62
Query: 87 NGDISAP 93
+ P
Sbjct: 63 SNSAPVP 69
>IMGA|Medtr5g078240.1 Homeodomain-related;
chr05_pseudomolecule_IMGAG_V3 28984628-28986611 E
EGN_Mt090430 20090702
Length = 307
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 54/60 (90%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
LFLLGL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR S KD+RR+SIHDIT+V
Sbjct: 141 LFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVN 200
>IMGA|Medtr5g089190.1 Homeodomain-related;
chr05_pseudomolecule_IMGAG_V3 34612404-34614655 E
EGN_Mt090430 20090702
Length = 271
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 58/68 (85%), Gaps = 2/68 (2%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIR--LNSMNKDRRRSSIHDITSV 85
FL+GL KYGKGDWR+ISRNFVVT+TPTQVASHAQKY+IR ++S KD+RR SIHDIT+V
Sbjct: 135 FLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSSGGKDKRRPSIHDITTV 194
Query: 86 GNGDISAP 93
+ S+P
Sbjct: 195 TLTETSSP 202
>IMGA|Medtr4g012540.1 Myb-like DNA-binding region, SHAQKYF class;
Homeodomain-like chr04_pseudomolecule_IMGAG_V3
2138903-2139157 E EGN_Mt090430 20090702
Length = 84
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 47/56 (83%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDIT 83
FL+GL KYGKGDWR+IS +FV TR TQVASHAQKYFIR + KD+RRSSIHDIT
Sbjct: 3 FLMGLKKYGKGDWRNISHDFVTTRIQTQVASHAQKYFIRQQNGGKDKRRSSIHDIT 58
>IMGA|Medtr8g105400.1 Myb-like DNA-binding region, SHAQKYF class;
Homeodomain-like chr08_pseudomolecule_IMGAG_V3
23272122-23276402 E EGN_Mt090430 20090702
Length = 326
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 54/65 (83%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
+FLLGL+K GKGDWR I+RN+V++RTPTQVASHAQKYFIR +++++ +RRSS+ DI +
Sbjct: 104 MFLLGLNKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADD 163
Query: 87 NGDIS 91
D S
Sbjct: 164 APDTS 168
>IMGA|Medtr4g160800.1 Interleukin-6/G-CSF/MGF; Myb-like DNA-binding
region, SHAQKYF class; Homeodomain-like
chr04_pseudomolecule_IMGAG_V3 40887118-40888902 E
EGN_Mt090430 20090702
Length = 280
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDI 82
+FL+GL+K GKGDWR IS+NFV +RTPTQVASHAQKYF+RL ++NK +RRSS+ D+
Sbjct: 114 MFLVGLEKLGKGDWRGISKNFVTSRTPTQVASHAQKYFLRLATINK-KRRSSLFDL 168
>IMGA|Medtr5g027740.1 Homeodomain-related
chr05_pseudomolecule_IMGAG_V3 11357289-11358401 H
EGN_Mt090430 20090702
Length = 233
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 16 QRLKFDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLN--SMNKD 73
+R+ + + + LFL G++KYGKG W+ IS+ FVVT+TP Q+ASHAQKYFI N + K
Sbjct: 90 ERVHWTEGEHKLFLEGIEKYGKGRWKDISKEFVVTKTPIQIASHAQKYFIHQNVKDIEKR 149
Query: 74 RRRSSIHDITSVGNG 88
++R SIHD T NG
Sbjct: 150 KKRRSIHDTTLNKNG 164
>IMGA|Medtr5g095050.1 Homeodomain-related
chr05_pseudomolecule_IMGAG_V3 37687716-37690184 E
EGN_Mt090430 20090702
Length = 436
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%), Gaps = 3/65 (4%)
Query: 22 DCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN---KDRRRSS 78
D + LFL GL K+GKG W+ IS+ FVVT+TPTQ+ASHAQKYFI N + K+++R S
Sbjct: 251 DDEHKLFLKGLKKHGKGRWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKS 310
Query: 79 IHDIT 83
IHD T
Sbjct: 311 IHDTT 315
>IMGA|Medtr5g095110.1 Homeodomain-related
chr05_pseudomolecule_IMGAG_V3 37698380-37695860 E
EGN_Mt090430 20090702
Length = 461
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 3/60 (5%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN---KDRRRSSIHDIT 83
LFL GL K+GKG W+ IS+ FVVT+TPTQ+ASHAQKYFI N + K+++R SIHD T
Sbjct: 281 LFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHDTT 340
>IMGA|Medtr5g038100.1 Zinc finger, CCHC-type; Homeodomain-related
chr05_pseudomolecule_IMGAG_V3 16070933-16073293 E
EGN_Mt090430 20090702
Length = 314
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 50/58 (86%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 84
LFLLGL + GKGDWR ISRNFV TRTPTQVASHAQKYF+R ++ N+ RRRSS+ DIT+
Sbjct: 111 LFLLGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITT 168
>IMGA|Medtr5g027730.1 Homeodomain-related
chr05_pseudomolecule_IMGAG_V3 11348649-11351585 H
EGN_Mt090430 20090702
Length = 271
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 16 QRLKFDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNS---MNK 72
+R+ + + + LFL G+ K+G+G W+ ISR FV T+TPTQ+ASHAQKYF+ + + K
Sbjct: 117 ERVHWTEGEHKLFLQGVKKHGRGRWKDISREFVKTKTPTQIASHAQKYFVHHQTAKEIEK 176
Query: 73 DRRRSSIHDITSVGNGDI 90
++R SIHDIT N I
Sbjct: 177 KKKRRSIHDITLNNNDTI 194
>IMGA|Medtr3g140030.1 Homeodomain-related
chr03_pseudomolecule_IMGAG_V3 36173953-36172763 E
EGN_Mt090430 20090702
Length = 220
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 36/40 (90%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIR 66
+FL GL+K GKG+WR ISR+FV T+TPTQVASHAQK+F+R
Sbjct: 100 IFLRGLEKLGKGNWRGISRDFVTTKTPTQVASHAQKHFLR 139
>IMGA|Medtr1g099710.1 Myb-like DNA-binding region, SHAQKYF class;
Homeodomain-like chr01_pseudomolecule_IMGAG_V3
20490388-20489640 H EGN_Mt090430 20090702
Length = 186
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 20 FDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNS---MNKDRRR 76
+D+ + LFL G +KYGKG W I+++ V T+T TQVASHAQK+FIR+ ++K R+R
Sbjct: 63 WDEEQHRLFLEGFEKYGKGKWIKIAQH-VGTKTTTQVASHAQKHFIRIKESAKLSKIRKR 121
Query: 77 SSIHDITSVGNG 88
SI T+ N
Sbjct: 122 RSIFYTTTTTNN 133
>IMGA|Medtr3g093140.1 Myb-like DNA-binding region, SHAQKYF class;
Homeodomain-like chr03_pseudomolecule_IMGAG_V3
22057996-22059332 H EGN_Mt090430 20090702
Length = 245
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL------NSMNKDRR-RSSIH 80
FL GL G W+ IS+++V T+TP QVASHAQKY R +S N R+ R+SIH
Sbjct: 134 FLKGLVDGKDGKWKEISKDYVKTKTPPQVASHAQKYEKRQKQRLDDDSKNMKRKLRASIH 193
Query: 81 DITSV 85
DIT++
Sbjct: 194 DITTL 198
>IMGA|Medtr3g140030.2 Homeodomain-related
chr03_pseudomolecule_IMGAG_V3 36173953-36172763 E
EGN_Mt090430 20090702
Length = 203
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVA 57
+FL GL+K GKG+WR ISR+FV T+TPTQV
Sbjct: 100 IFLRGLEKLGKGNWRGISRDFVTTKTPTQVG 130
>IMGA|Medtr8g087470.1 Myb-like DNA-binding region, SHAQKYF class;
Homeodomain-like chr08_pseudomolecule_IMGAG_V3
18186716-18185364 H EGN_Mt090430 20090702
Length = 242
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 QRLKFDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 67
Q + + + LF++GL KYG+G W I+ NFV +TP QV S+A +F L
Sbjct: 98 QMVPWSQTEHDLFVMGLIKYGQGRWGKIAENFVCNKTPQQVQSYAASFFRHL 149
>IMGA|Medtr5g083570.1 Homeodomain-related
chr05_pseudomolecule_IMGAG_V3 31732571-31733786 H
EGN_Mt090430 20090702
Length = 224
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 25/106 (23%)
Query: 6 FSCCSIDFLFQRLKFDDCKG---------------------TLFLLGLDKYGKGDWRSIS 44
FS S DF+ + D+ K LFL G++ +GKG W+ IS
Sbjct: 80 FSTNSDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLIS 139
Query: 45 RNFVVTRTPTQVASHAQKYFI-RLNSMNKD--RRRSSIHDITSVGN 87
++ V TRT +QVASHAQK+F+ +L+ +K ++RS+ + + GN
Sbjct: 140 QH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFYITSLKGN 184
>IMGA|Medtr8g087540.1 Homeodomain-related
chr08_pseudomolecule_IMGAG_V3 18210749-18209071 E
EGN_Mt090430 20090702
Length = 225
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNS--MNKDRRRSSIHDIT- 83
LFL+GL +YGKG W I++N+V ++T QV S+ +F+ L + ++ R+R I + +
Sbjct: 112 LFLMGLIEYGKGKWSKIAKNYVSSKTRQQVKSYGLSFFMYLPATFVHGFRKRKQIANPSN 171
Query: 84 SVGNGDISAPQGPITGQ 100
S + ++P P G+
Sbjct: 172 SASKRNRNSPSAPYYGE 188
>IMGA|Medtr5g083610.1 Homeodomain-related
chr05_pseudomolecule_IMGAG_V3 31744971-31745980 H
EGN_Mt090430 20090702
Length = 224
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 4/65 (6%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI-RLNSMNKD--RRRSSIHDIT 83
LFL G++ + KG+W+ IS++ V TRT +QVASHAQK+F+ +L+ +K ++RS+ + +
Sbjct: 122 LFLEGIEIHKKGNWKMISQH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFYITS 180
Query: 84 SVGNG 88
GN
Sbjct: 181 LKGNS 185