Jatropha Genome Database

JcCA0154641.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154641.20 - phase: 0 
         (398 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g091460.1 Indole-3-glycerol phosphate synthase; TonB ...   542   e-155

>IMGA|Medtr5g091460.1 Indole-3-glycerol phosphate synthase; TonB
           box, N-terminal; chr05_pseudomolecule_IMGAG_V3
           35789863-35784612 E EGN_Mt090430 20090702
          Length = 391

 Score =  542 bits (1397), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 271/397 (68%), Positives = 313/397 (78%), Gaps = 7/397 (1%)

Query: 1   MEGLVSPRVSIKITPALYHRPKFSIKRSMNLHTGVNRFSVASIKAQQAETKEGSATVSAA 60
           ME L+S +    + P+    P+ +I  +  +    N     S++AQ  +  EGSAT++ +
Sbjct: 1   MEPLISLKGHFHVFPSFSSNPRTTIPPTQVITYRKNSIFTLSVRAQ-VDPNEGSATIATS 59

Query: 61  VKEEVPAATVENALEVKEWEVGMLQNEVAASQXXXXXXXXXXXXXLHYVGPFEFRIQNEG 120
                   +V  AL+VKEWEVGM  NEVAA+Q              HYVGPF+FR+QNEG
Sbjct: 60  ------GESVVEALKVKEWEVGMFHNEVAATQGIRIRRRPPTGPPNHYVGPFQFRLQNEG 113

Query: 121 NTPRNILEEIVWNKDIEVSQLKERKPLSSLKKSLDNAPPARDFIGALKEANIRTGFPGLI 180
           NTPRNILEEIVWNKD EV+QLKERKPL ++ K+L NAPP RDFIGAL+ AN RTG PGLI
Sbjct: 114 NTPRNILEEIVWNKDNEVAQLKERKPLITISKALGNAPPVRDFIGALRAANERTGLPGLI 173

Query: 181 AEVKKASPSRGIIREDFDPVEIAQAYEKGGAACLSVLTDEKYFKGSFENLEAIRNAGVKC 240
           AEVKKASPSRGI+RE+FDPVEIAQ+YEKGGAACLSVLTDEKYFKGSFENLE IRNAGVKC
Sbjct: 174 AEVKKASPSRGILRENFDPVEIAQSYEKGGAACLSVLTDEKYFKGSFENLELIRNAGVKC 233

Query: 241 PLLCKEFVIDAWQIYYARTKGADAILLIAAVLPDLDIRYMTKICKMLGLAALVEVHDERE 300
           PLLCKEF+IDAWQ+YYAR+KGADA+LLIAAVLPDLDI+YM KICK+LGL ALVEVHDE E
Sbjct: 234 PLLCKEFIIDAWQLYYARSKGADAVLLIAAVLPDLDIKYMVKICKLLGLTALVEVHDEME 293

Query: 301 MDRVXXXXXXXXXXXNNRDLETFKVDISNTKKLLQGERGEQIRQKGIIVVGESGLFTPED 360
            DRV           NNR+LETF++DIS TKKLL+GERG+ IR++ II+VGESGLFTPED
Sbjct: 294 FDRVLGIEGVELIGINNRNLETFELDISTTKKLLEGERGKIIRERNIIMVGESGLFTPED 353

Query: 361 IAYVQEAGVKAVLVGESIVKQSDPGKGIAGLFGKDIS 397
           IAYVQEAGVKAVLVGESIVKQSDPGKGI+ LFGKDIS
Sbjct: 354 IAYVQEAGVKAVLVGESIVKQSDPGKGISNLFGKDIS 390