Jatropha Genome Database

JcCA0154641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154641.10 - phase: 0 
         (129 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g106600.1 hypothetical protein chr03_pseudomolecule_I...    94   1e-20
IMGA|Medtr4g028620.1 hypothetical protein chr04_pseudomolecule_I...    94   1e-20
IMGA|Medtr3g106610.1 hypothetical protein chr03_pseudomolecule_I...    92   5e-20
IMGA|Medtr4g028440.1 hypothetical protein chr04_pseudomolecule_I...    92   9e-20
IMGA|Medtr6g035630.1 hypothetical protein chr06_pseudomolecule_I...    85   8e-18
IMGA|Medtr6g035760.1 hypothetical protein chr06_pseudomolecule_I...    77   2e-15

>IMGA|Medtr3g106600.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 26865898-26865419 H
           EGN_Mt090430 20090702
          Length = 159

 Score = 94.4 bits (233), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 1/93 (1%)

Query: 11  PRLPSGYDVEYRAIADDAWYSVRTVLN-GEKLTVKYDNFSDENDSIFEPQNFKSVAEIED 69
           P     Y  E+R   D AWY+V   L   E L V+Y+ F+DE D+IFEP  F+S+ E+ +
Sbjct: 34  PEQNQNYVTEFRNYEDGAWYTVMVTLEEKETLRVRYEKFTDEEDNIFEPSFFESLEELVE 93

Query: 70  FEKRFRPISIQLQDRECKNVPNGAVVCASHSFT 102
           FEKRFRP+S+Q+QD EC+ +  G  VCAS  FT
Sbjct: 94  FEKRFRPLSVQVQDYECRKLVKGVRVCASLHFT 126


>IMGA|Medtr4g028620.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 6623322-6622843 H
           EGN_Mt090430 20090702
          Length = 159

 Score = 94.4 bits (233), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 1/93 (1%)

Query: 11  PRLPSGYDVEYRAIADDAWYSVRTVLN-GEKLTVKYDNFSDENDSIFEPQNFKSVAEIED 69
           P     Y  E+R   D AWY+V   L   E L V+Y+ F+DE D+IFEP  F+S+ E+ +
Sbjct: 34  PEQNQNYVTEFRNYEDGAWYTVMVTLEEKETLRVRYEKFTDEEDNIFEPSFFESLEELVE 93

Query: 70  FEKRFRPISIQLQDRECKNVPNGAVVCASHSFT 102
           FEKRFRP+S+Q+QD EC+ +  G  VCAS  FT
Sbjct: 94  FEKRFRPLSVQVQDYECRKLVKGVRVCASLHFT 126


>IMGA|Medtr3g106610.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 26874860-26868257 E
           EGN_Mt090430 20090702
          Length = 543

 Score = 92.4 bits (228), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 17  YDVEYRAIADDAWYSVRTVLNG-EKLTVKYDNFSDENDSIFEPQNFKSVAEIEDFEKRFR 75
           Y  E+R   DDAWY+V     G E L VKY+  +DE D++FEP  F S+ ++++FE RFR
Sbjct: 51  YVTEFRNFLDDAWYTVSVTFEGNESLRVKYEKNTDEIDNLFEPGFFNSMEDLQEFETRFR 110

Query: 76  PISIQLQDRECKNVPNGAVVCASHSF 101
           P+S+Q+QD +C+ +  G  VCASH F
Sbjct: 111 PLSVQVQDHQCRELVPGVRVCASHEF 136


>IMGA|Medtr4g028440.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 6544478-6546425 E
           EGN_Mt090430 20090702
          Length = 258

 Score = 91.7 bits (226), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 1/87 (1%)

Query: 16  GYDVEYRAIADDAWYSVRTVLNG-EKLTVKYDNFSDENDSIFEPQNFKSVAEIEDFEKRF 74
            Y  E+R   DDAWY+V     G E L VKY+  +DE D++FEP  F S+ ++++FE RF
Sbjct: 50  NYVTEFRNFLDDAWYTVSVTFEGNESLRVKYEKNTDEIDNLFEPGFFNSMEDLQEFETRF 109

Query: 75  RPISIQLQDRECKNVPNGAVVCASHSF 101
           RP+S+Q+QD +C+ +  G  VCASH F
Sbjct: 110 RPLSVQVQDHQCRELVPGVRVCASHEF 136


>IMGA|Medtr6g035630.1 hypothetical protein
           chr06_pseudomolecule_IMGAG_V3 7661499-7660136 E
           EGN_Mt090430 20090702
          Length = 246

 Score = 85.1 bits (209), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 17  YDVEYRAIADDAWYSVRTVLN-GEKLTVKYDNFSDENDSIFEPQNFKSVAEIEDFEKRFR 75
           Y  E+R   D AWY+V   L   E L V Y+ F+D +D++FE  +F S+ ++ +FEKRFR
Sbjct: 11  YVTEFRNYEDGAWYTVTVTLQEKETLRVGYEEFTDGDDNLFEQSSFDSLEKLHEFEKRFR 70

Query: 76  PISIQLQDRECKNVPNGAVVCASHSF 101
           P+SIQ QD EC  + +G  VCAS  F
Sbjct: 71  PLSIQAQDHECHKLVHGVRVCASLHF 96


>IMGA|Medtr6g035760.1 hypothetical protein
           chr06_pseudomolecule_IMGAG_V3 7693471-7697870 E
           EGN_Mt090430 20090702
          Length = 404

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 16  GYDVEYRAIADDAWYSVRTVLN-GEKLTVKYDNFSDENDSIFEPQNFKSVAEIEDFEKRF 74
            Y  EY+   DDAWY V   L   E L V Y  F+D   ++F    F S+ E+ +FEKRF
Sbjct: 19  NYVTEYQNYEDDAWYVVMVTLQEKETLQVSYKKFNDVYKNLFPSSLFHSLEELHEFEKRF 78

Query: 75  RPISIQLQDRECKNVPNGAVVCASHSF 101
           RP+S+Q QD EC  + +G  VCAS  F
Sbjct: 79  RPVSVQAQDYECHKLVHGVRVCASVRF 105