Jatropha Genome Database

JcCA0154191.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154191.30 - phase: 1 /partial
         (57 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g009340.1 Sterol desaturase chr08_pseudomolecule_IMGA...    82   1e-16
IMGA|Medtr7g107150.1 Sterol desaturase chr07_pseudomolecule_IMGA...    77   3e-15
IMGA|Medtr4g072630.1 Sterol desaturase, putative chr04_pseudomol...    77   3e-15
IMGA|Medtr4g072620.1 Sterol desaturase, putative chr04_pseudomol...    77   3e-15
IMGA|Medtr4g072710.1 Sterol desaturase, putative chr04_pseudomol...    76   4e-15
IMGA|Medtr7g107120.1 Protein WAX2, related chr07_pseudomolecule_...    75   1e-14
IMGA|Medtr7g107130.1 Sterol desaturase chr07_pseudomolecule_IMGA...    74   2e-14
IMGA|Medtr4g072480.1 Protein WAX2, related chr04_pseudomolecule_...    74   2e-14

>IMGA|Medtr8g009340.1 Sterol desaturase
           chr08_pseudomolecule_IMGAG_V3 1337012-1330094 E
           EGN_Mt090430 20090702
          Length = 622

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/48 (70%), Positives = 41/48 (85%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGYSMYHIDKVWQAALRHGFKPLSI 48
           RRVMSAWR+AGI+HALE W V ECG  M+ IDK+WQA+L+HGF+PL I
Sbjct: 570 RRVMSAWRIAGILHALEGWDVHECGEVMFSIDKIWQASLQHGFRPLKI 617


>IMGA|Medtr7g107150.1 Sterol desaturase
           chr07_pseudomolecule_IMGAG_V3 25010227-25015720 E
           EGN_Mt090430 20090702
          Length = 617

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/51 (60%), Positives = 43/51 (84%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGYSMYHIDKVWQAALRHGFKPLSIVSA 51
           RRVMSAWR+AGI+HALE W V ECG ++   +KVW+A++RHGF+PL I+++
Sbjct: 565 RRVMSAWRIAGIIHALEGWNVHECGDTILSTEKVWEASIRHGFQPLKILTS 615


>IMGA|Medtr4g072630.1 Sterol desaturase, putative
          chr04_pseudomolecule_IMGAG_V3 13992769-14002094 H
          EGN_Mt090430 20090702
          Length = 87

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 1  RRVMSAWRVAGIVHALEEWKVDECGYSMYHIDKVWQAALRHGFKPLSI 48
          RRVMSAWR+AGI+HALE W V ECG +++ I+KVW+A++RHGF PL I
Sbjct: 38 RRVMSAWRIAGIIHALERWNVHECGDTVFDIEKVWEASIRHGFLPLKI 85


>IMGA|Medtr4g072620.1 Sterol desaturase, putative
          chr04_pseudomolecule_IMGAG_V3 13982184-13991509 H
          EGN_Mt090430 20090702
          Length = 87

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 1  RRVMSAWRVAGIVHALEEWKVDECGYSMYHIDKVWQAALRHGFKPLSI 48
          RRVMSAWR+AGI+HALE W V ECG +++ I+KVW+A++RHGF PL I
Sbjct: 38 RRVMSAWRIAGIIHALERWNVHECGDTVFDIEKVWEASIRHGFLPLKI 85


>IMGA|Medtr4g072710.1 Sterol desaturase, putative
          chr04_pseudomolecule_IMGAG_V3 14074356-14087413 E
          EGN_Mt090430 20090702
          Length = 56

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 32/50 (64%), Positives = 42/50 (84%)

Query: 1  RRVMSAWRVAGIVHALEEWKVDECGYSMYHIDKVWQAALRHGFKPLSIVS 50
          RRVMSAWR+AGI+HALE W V ECG +++ I+KVW+A++RHGF PL I +
Sbjct: 7  RRVMSAWRIAGIIHALERWNVHECGDTVFDIEKVWEASIRHGFLPLKIPN 56


>IMGA|Medtr7g107120.1 Protein WAX2, related
           chr07_pseudomolecule_IMGAG_V3 24992118-24993176 E
           EGN_Mt090430 20090702
          Length = 135

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 41/49 (83%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGYSMYHIDKVWQAALRHGFKPLSIV 49
           RRVMSAWR+AGI+HALE W V ECG ++  I+KVW+A++RHGF+PL  +
Sbjct: 84  RRVMSAWRIAGIIHALEGWNVHECGDTILSIEKVWEASIRHGFQPLKNI 132


>IMGA|Medtr7g107130.1 Sterol desaturase
           chr07_pseudomolecule_IMGAG_V3 24999246-25005539 E
           EGN_Mt090430 20090702
          Length = 617

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/46 (65%), Positives = 39/46 (84%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGYSMYHIDKVWQAALRHGFKPL 46
           RRVMSAWR+AGI+HALE W V ECG ++   +KVW+A++RHGF+PL
Sbjct: 566 RRVMSAWRIAGIIHALEGWNVHECGDTILSTEKVWEASIRHGFQPL 611


>IMGA|Medtr4g072480.1 Protein WAX2, related
           chr04_pseudomolecule_IMGAG_V3 13919416-13917469 E
           EGN_Mt090430 20090702
          Length = 126

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 41/48 (85%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGYSMYHIDKVWQAALRHGFKPLSI 48
           RRVMSAWR+AGI+HALE W   ECG ++++I+KVW+A++RHG+ PL I
Sbjct: 71  RRVMSAWRIAGIIHALEGWDAHECGDTVFNIEKVWEASIRHGYLPLKI 118