Jatropha Genome Database

JcCA0154191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154191.10 + phase: 0 /partial
         (169 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g009290.1 Adenylate/cytidine kinase, N-terminal chr08...   211   1e-55
IMGA|Medtr5g077590.1 UMP-CMP kinase chr05_pseudomolecule_IMGAG_V...   144   3e-35

>IMGA|Medtr8g009290.1 Adenylate/cytidine kinase, N-terminal
           chr08_pseudomolecule_IMGAG_V3 1306400-1299719 F
           EGN_Mt090430 20090702
          Length = 208

 Score =  211 bits (537), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 100/140 (71%), Positives = 119/140 (85%)

Query: 22  TMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPEFV 81
           TMIQNMIKEGKIVPSEVTI+LLQ+A++++GNDKFLIDGFPRNEENRAAFE VT IEP FV
Sbjct: 68  TMIQNMIKEGKIVPSEVTIRLLQQAIKDNGNDKFLIDGFPRNEENRAAFERVTGIEPAFV 127

Query: 82  LFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDAGK 141
           L+FDC            NQGREDDNIETIRKRF+VFL+SS+PV+ YY++KG+VRK+DA +
Sbjct: 128 LYFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLDSSLPVINYYDAKGKVRKVDAAR 187

Query: 142 SVEEVFEAVKSIFTQKDEKV 161
            VEEVFE+VK+IF  K+EK 
Sbjct: 188 PVEEVFESVKAIFGPKNEKA 207


>IMGA|Medtr5g077590.1 UMP-CMP kinase chr05_pseudomolecule_IMGAG_V3
           28604295-28600249 E EGN_Mt090430 20090702
          Length = 218

 Score =  144 bits (362), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 66/136 (48%), Positives = 94/136 (69%)

Query: 20  YRTMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPE 79
           Y  MI   I+EG+IVPS VT++L+ + M+   N KFLIDGFPR+EENR AFE +T  EP+
Sbjct: 76  YGAMILETIREGRIVPSAVTVRLILREMQYGDNRKFLIDGFPRSEENRIAFEHITGTEPD 135

Query: 80  FVLFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDA 139
           FVL+FDC            NQGR DDNI+TI+KR +VF   ++PV+++Y  +GR+ +I+A
Sbjct: 136 FVLYFDCPEEEMVKRVLSRNQGRIDDNIDTIKKRLKVFEALNLPVIDHYARRGRLHRINA 195

Query: 140 GKSVEEVFEAVKSIFT 155
             + +E+FE V+ +F 
Sbjct: 196 VGTEDEIFEQVRPVFA 211