Jatropha Genome Database

JcCA0154181.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154181.30 + phase: 0 
         (161 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase ...   145   8e-36
IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase ...   122   6e-29
IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase ...    74   2e-14
IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase ...    74   3e-14
IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase ...    73   6e-14
IMGA|Medtr5g078730.1 Di-trans-poly-cis-decaprenylcistransferase ...    52   1e-07

>IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29148457-29146350 E
           EGN_Mt090430 20090702
          Length = 310

 Score =  145 bits (366), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 76/166 (45%), Positives = 110/166 (66%), Gaps = 8/166 (4%)

Query: 1   MKALNLSLPI---SAYNTQTLQNPKCFLSPNARNQSRPLHRRFPQLLATKTDLAVKQEDK 57
           M +L L +P+   +A  T  +      +  ++R  S+ + +R   ++A +  +     + 
Sbjct: 1   MFSLTLPMPLLLKTAITTNHVHRGITQIQTHSRYSSKLVTKRVTTVVAFQDRV---DGET 57

Query: 58  SVIED--EIEPLPEDLRPELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKL 115
           SV  D  E+EPLP++L+ +LMP+HVA+IMDGNGRWA+ +G  AS GH AG ++L  +V L
Sbjct: 58  SVDGDFPEVEPLPKELQADLMPKHVAVIMDGNGRWAKMRGLPASAGHVAGIKSLRRMVML 117

Query: 116 CWQWGIKVLTVFAFSCDNWTRPQVEVDFLMSLFEKSLKSEINNFVR 161
           C+ WGIKVLTVFAFS DNW RP+VEV+FLMSLFE+++ SEI    R
Sbjct: 118 CYSWGIKVLTVFAFSTDNWIRPKVEVEFLMSLFERTINSEIEALER 163


>IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29154047-29152742 E
           EGN_Mt090430 20090702
          Length = 215

 Score =  122 bits (307), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 104/169 (61%), Gaps = 15/169 (8%)

Query: 4   LNLSLPISAYNT--QTLQNPKCFLSPNARNQSRPLHRRFPQLLATKTDLA--VKQEDK-- 57
           L+LS PI+      +T  NP    +  +R+QSR L  +   ++   T +A  +   DK  
Sbjct: 2   LSLSPPITLITCPPKTTTNP----THASRSQSRRLPSQPMIIIKRGTTVAGSIPNADKAE 57

Query: 58  ---SVIED--EIEPLPEDLRPELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDI 112
              S+ ED  E+E    +LR E++P+HVA+IMDGNGRWA+ +G   S GH AG ++L  +
Sbjct: 58  GRASIDEDLLEVELTQTELRKEMIPKHVAVIMDGNGRWAKMRGLPLSEGHTAGMQSLKTM 117

Query: 113 VKLCWQWGIKVLTVFAFSCDNWTRPQVEVDFLMSLFEKSLKSEINNFVR 161
           VK+C +W IKVLT+F FS DNW RP++EV+FL SL E+ + SE    +R
Sbjct: 118 VKMCLRWEIKVLTIFMFSTDNWIRPKLEVEFLFSLLERIINSETEAIMR 166


>IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26316000-26314195 E
           EGN_Mt090430 20090702
          Length = 251

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 49/78 (62%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWT 135
           +P H+A IMDGN R+AR++      GH+AG   L  +++ C++ GIK +TV+AFS DN+ 
Sbjct: 65  LPNHIAFIMDGNRRYARRRNMGEGDGHKAGFSALLSVLRYCYELGIKYVTVYAFSIDNFR 124

Query: 136 RPQVEVDFLMSLFEKSLK 153
           R   EV   M L  + ++
Sbjct: 125 RKPKEVQTFMELMREKIE 142


>IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26461750-26464002 E
           EGN_Mt090430 20090702
          Length = 360

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 49/78 (62%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWT 135
           +P H+A IMDGN R+AR++      GH+AG   L  +++ C++ GIK +TV+AFS DN+ 
Sbjct: 33  LPNHIAFIMDGNRRYARRRNMGEGDGHKAGFSALLSVLRYCYELGIKYVTVYAFSIDNFR 92

Query: 136 RPQVEVDFLMSLFEKSLK 153
           R   EV   M L  + ++
Sbjct: 93  RKPKEVQTFMELMREKIE 110


>IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase
           chr08_pseudomolecule_IMGAG_V3 18527683-18528833 E
           EGN_Mt090430 20090702
          Length = 360

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 49/78 (62%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWT 135
           +P H+A IMDGN R+AR++      GH+AG   L  +++ C++ GIK +TV+AFS DN+ 
Sbjct: 33  LPNHIAFIMDGNRRYARRRNLGEGDGHKAGFSALLSVLRYCYELGIKYVTVYAFSIDNFR 92

Query: 136 RPQVEVDFLMSLFEKSLK 153
           R   EV   M L  + ++
Sbjct: 93  RKPKEVQTFMELMREKIE 110


>IMGA|Medtr5g078730.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29169007-29168654 I
           EGN_Mt090430 20090702
          Length = 117

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 22/109 (20%)

Query: 4   LNLSLPISAYNTQTLQNPKCFLSPNARNQ-SRPLHRRFPQ--LLATK------------- 47
            +L LPI+  NT  + NP    +P++ +  SR    RFP   ++ TK             
Sbjct: 2   FSLRLPIALKNT-LITNP----APSSHHHYSRYQSHRFPSQPMVVTKRGSGTTAAAPIPN 56

Query: 48  TDLAVKQEDKSVIEDE-IEPLPEDLRPELMPRHVAIIMDGNGRWARQKG 95
           T L  + E +S   DE +  +P +L+ ELMP+HVA+IMDGN RWA+ +G
Sbjct: 57  TALEYEAEGRSSSPDEDLLLMPAELKEELMPKHVALIMDGNRRWAKMRG 105