Jatropha Genome Database

JcCA0154091.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154091.30 + phase: 0 
         (196 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g083200.1 Basic leucine zipper chr05_pseudomolecule_I...   113   7e-26
IMGA|Medtr2g118430.1 bZIP transcription factor, bZIP_1 chr02_pse...    62   2e-10

>IMGA|Medtr5g083200.1 Basic leucine zipper
           chr05_pseudomolecule_IMGAG_V3 31545161-31541460 E
           EGN_Mt090430 20090702
          Length = 358

 Score =  113 bits (282), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/143 (50%), Positives = 89/143 (62%), Gaps = 30/143 (20%)

Query: 32  SGHRRAHSEVHFRLQEDL-DLV-TDPFEGPSGS-SFDELGSEDDLFCTYMDIEKLGSRPE 88
           S HRRAHS++ FRL +D+ DL  +DPF G S + S DE+GSEDDLF TY+D++KLG    
Sbjct: 49  SHHRRAHSDLTFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFSTYIDMDKLGDGGA 108

Query: 89  EGPSGLKLDNAVNGLTDXXXXXXXXXXXXXXDADEEKNVRPRHRYSNSVDGSS-FLESIE 147
           + P G                          D  E+  VR RHR+SNSVDGSS F E ++
Sbjct: 109 D-PGG-------------------------NDEGEKNPVRSRHRHSNSVDGSSSFGEIMD 142

Query: 148 AKKAMAPDKLAELWTLDPKRAKR 170
            KKAM PDKLAELW++DPKRAKR
Sbjct: 143 GKKAMPPDKLAELWSVDPKRAKR 165


>IMGA|Medtr2g118430.1 bZIP transcription factor, bZIP_1
           chr02_pseudomolecule_IMGAG_V3 28199221-28195275 E
           EGN_Mt090430 20090702
          Length = 429

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 27/164 (16%)

Query: 30  RSSGHRRAHSEVHFRLQEDLDLVTD--PFEGPSGSSFDELGSEDDLFCTYMDIEKLGSRP 87
           R+ GHRRAHSE+   L +D+   +D     G  G SF +  +E+DL   Y+D++K  S  
Sbjct: 68  RNRGHRRAHSEI-LTLPDDISFDSDLGVVGGADGPSFSD-DTEEDLLSMYLDMDKFNS-- 123

Query: 88  EEGPSGLKLDNAVN-----GLTDXXXXXXXXXXXXXXD--ADEEKNVRPR--HRYSNSVD 138
               S  ++    N     GL                +  A    N RPR  H++S S+D
Sbjct: 124 SSATSNFQMGEGSNAAGASGLAPMSVGQTSGGGTSSGENMAVGTTNERPRIRHQHSQSMD 183

Query: 139 GSSFLE------------SIEAKKAMAPDKLAELWTLDPKRAKR 170
           GS+ ++            + ++KKAM+  KLAEL  +DPKRAKR
Sbjct: 184 GSTTIKPEMLVSGSDDMSAADSKKAMSAAKLAELALIDPKRAKR 227