Jatropha Genome Database

JcCA0153841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153841.10 + phase: 0 
         (225 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g062170.1 Plant Basic Secretory Protein chr03_pseudom...    57   9e-09

>IMGA|Medtr3g062170.1 Plant Basic Secretory Protein
           chr03_pseudomolecule_IMGAG_V3 14264532-14268469 E
           EGN_Mt090430 20090702
          Length = 294

 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 33/249 (13%)

Query: 6   FLLSLLVTLATIQGNHAV----DYTVTNTATSTAGGARFTTD-IGEDYAKKTLSAATDFI 60
            LL L V + +I  N+      D  + N    +  G RFT   +  D A + L   + F+
Sbjct: 47  ILLILFVAIISIWANYEASKTFDIHIVNDTKDSLAGRRFTLFYVSNDKASRILLNTSSFV 106

Query: 61  WRVF------QQVNAEDRKDVQQVSLFI--DDMDGVAYASNNEIHVSANYIGNYSGDLVR 112
            ++         ++ +++K ++ V+L +   ++D +   + +E ++++ Y+   S  L+ 
Sbjct: 107 EQILYPNGNNDNIDIKNKKIIKSVTLRLARQNLDTITTITADEKNINS-YVIEISPMLLE 165

Query: 113 E-------FSGVIYHEMTHIWQWNGNGQTPVGLIEGIADFV---------RLKANYAPSH 156
           +         G I   M  +W W+G  +    L++G+ +++         RL      S 
Sbjct: 166 DENFNNMAIVGAIQRAMARVWLWDGRSKASPRLLDGMVEYIAELAGFHRERLSGGVGESP 225

Query: 157 WVQPGQGDKWDQGYDVT--ARFLDYCNDLRNGFVAELNKKMRTGYSNQYFVDLLGKSVDQ 214
             + G+   WD   D T  AR L YC     GF+  LN+ M+  + ++   D+LG    +
Sbjct: 226 ECEDGRELWWDNK-DPTHVARLLHYCEKYDKGFIQRLNEAMKDTWHDRMVGDVLGLKATK 284

Query: 215 LWSDYKAKY 223
           L   Y A Y
Sbjct: 285 LCGLYNATY 293