Jatropha Genome Database

JcCA0153811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153811.10 - phase: 0 
         (120 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g115370.1 hydrolase, alpha/beta fold family protein p...   131   1e-31
IMGA|Medtr5g047260.1 Alpha/beta hydrolase fold chr05_pseudomolec...   127   1e-30

>IMGA|Medtr4g115370.1 hydrolase, alpha/beta fold family protein
           putative chr04_pseudomolecule_IMGAG_V3 26681085-26683439
           E EGN_Mt090430 20090702
          Length = 201

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 70/89 (78%)

Query: 19  LQVGFPGKCIMSSCVKPLIKSQNSPVVLLHCFDSSCLEWRCTYPLLEDAGLEAWAVDVLG 78
           + V F    IMSSCVKPL++++ +P+VLLH FDSSCLEWR TYPLLE+AG+E WA+D+LG
Sbjct: 51  VSVKFSENPIMSSCVKPLVQNKENPIVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILG 110

Query: 79  WGFSDLEMRPPCDVASKRYHLYQVTPSYI 107
           WGFSDLE  P CDV SKR H YQ   SYI
Sbjct: 111 WGFSDLEKLPSCDVVSKREHFYQFWKSYI 139


>IMGA|Medtr5g047260.1 Alpha/beta hydrolase fold
           chr05_pseudomolecule_IMGAG_V3 19938300-19930081 H
           EGN_Mt090430 20090702
          Length = 354

 Score =  127 bits (320), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 58/87 (66%), Positives = 67/87 (77%)

Query: 21  VGFPGKCIMSSCVKPLIKSQNSPVVLLHCFDSSCLEWRCTYPLLEDAGLEAWAVDVLGWG 80
           V F    IMSSCVKPL++++  P+VLLH FDSSCLEWR  YPLLE++G E WA+D+LGWG
Sbjct: 72  VSFVENPIMSSCVKPLVQNKEPPIVLLHGFDSSCLEWRYGYPLLEESGFETWAIDILGWG 131

Query: 81  FSDLEMRPPCDVASKRYHLYQVTPSYI 107
           FSDLE  PPCDV SKR H YQ   SYI
Sbjct: 132 FSDLENLPPCDVVSKRNHFYQFWKSYI 158