Jatropha Genome Database

JcCA0153671.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153671.20 - phase: 0 
         (279 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g111130.1 Nitrate reductase NADH dependant chr03_pseu...   484   e-137
IMGA|Medtr7g103920.1 Nitrate reductase NADH dependant chr07_pseu...   439   e-124
IMGA|Medtr8g047920.1 Nitrate reductase NADH dependant chr08_pseu...   416   e-117
IMGA|Medtr8g119780.1 Nitrate reductase NADH dependant chr08_pseu...   214   5e-56
IMGA|Medtr3g098300.1 Oxidoreductase FAD/NAD(P)-binding chr03_pse...   176   1e-44
IMGA|Medtr3g098350.1 Mo-co oxidoreductase dimerisation domain ch...   175   2e-44
IMGA|Medtr8g119700.1 Oxidoreductase FAD-binding region chr08_pse...    69   2e-12

>IMGA|Medtr3g111130.1 Nitrate reductase NADH dependant
           chr03_pseudomolecule_IMGAG_V3 28099365-28090553 E
           EGN_Mt090430 20090702
          Length = 278

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 228/279 (81%), Positives = 251/279 (89%), Gaps = 1/279 (0%)

Query: 1   MESLHSHKAEMISIAVALFAIGAGTAYYLYITSKKPKGCLDPQNFKEFKLVKRTQLSHNV 60
           M+ L + K E+I++AVAL AI  GTAYY Y+T KKPKGCLDP+NFKEFKLVKRTQLSHNV
Sbjct: 1   MDFLQNQKVEVITMAVALVAILGGTAYYYYLT-KKPKGCLDPENFKEFKLVKRTQLSHNV 59

Query: 61  AKFKFALPTPTSVLGLPIGQHMSCRGKDSLGEEVAKPYTPTTLDSDLGYFELVIKMYPQG 120
           A F+F LP  +SVLGLPIGQH+SCRGKDSLGEEV KPYTPTTLD+D+GYFELV+KMYPQG
Sbjct: 60  ATFRFCLPNRSSVLGLPIGQHISCRGKDSLGEEVIKPYTPTTLDTDVGYFELVVKMYPQG 119

Query: 121 RMSHHFREMREGDYLAVKGPKGRFKYQPNQVRVFGMLAGGTGITPMFQVTRAILENPNDK 180
           RMSHHF EMREGDYLAVKGPKGRFKYQPNQV+ FGM+AGGTGITPMFQV RAILENP DK
Sbjct: 120 RMSHHFSEMREGDYLAVKGPKGRFKYQPNQVKAFGMVAGGTGITPMFQVARAILENPQDK 179

Query: 181 TNIHLIYANVTYEDILLKEELDNLANNFPNRFSVYYVLNQPPEGWDGGIGFVSKEMIEKH 240
           TN++LIYANVTY+DILLKEELD+LA  FPNRF VYYVLNQPPE WDGG+GFVSKEMIE  
Sbjct: 180 TNVNLIYANVTYDDILLKEELDDLAIKFPNRFKVYYVLNQPPEIWDGGVGFVSKEMIETQ 239

Query: 241 CPAPAPDVQILRCGPPPMNKAMAAHLEALGYTSQMQFQF 279
            PAPA D++ILRCGPPPMNKAMAAHLE LGY+ QMQFQF
Sbjct: 240 FPAPAADIKILRCGPPPMNKAMAAHLEDLGYSPQMQFQF 278


>IMGA|Medtr7g103920.1 Nitrate reductase NADH dependant
           chr07_pseudomolecule_IMGAG_V3 23427281-23432322 E
           EGN_Mt090430 20090702
          Length = 278

 Score =  439 bits (1128), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 201/249 (80%), Positives = 224/249 (89%)

Query: 31  ITSKKPKGCLDPQNFKEFKLVKRTQLSHNVAKFKFALPTPTSVLGLPIGQHMSCRGKDSL 90
           ++SKK K CL+P  F+EFKLVK+ QLSHNVAKF F+LPTPTSVLGLPIGQH+SCRGKD  
Sbjct: 30  LSSKKSKACLNPDQFREFKLVKKAQLSHNVAKFTFSLPTPTSVLGLPIGQHISCRGKDGQ 89

Query: 91  GEEVAKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYQPNQ 150
           G+EV KPYTPTTLDSD+G+FELVIKMYPQGRMSHHFREMR GDYLAVKGPKGRFKYQP +
Sbjct: 90  GDEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFKYQPGE 149

Query: 151 VRVFGMLAGGTGITPMFQVTRAILENPNDKTNIHLIYANVTYEDILLKEELDNLANNFPN 210
           VR FGMLAGG+GITPMFQV RAILENPNDKT +HLIYANVT+EDILLKEELD LA N+P+
Sbjct: 150 VRAFGMLAGGSGITPMFQVARAILENPNDKTKVHLIYANVTFEDILLKEELDGLATNYPD 209

Query: 211 RFSVYYVLNQPPEGWDGGIGFVSKEMIEKHCPAPAPDVQILRCGPPPMNKAMAAHLEALG 270
           RF +YYVLNQPPE WDGG+GFVSKEMI+ H P PA D++ILRCGPPPMNKAMAAHLEA+ 
Sbjct: 210 RFKIYYVLNQPPEVWDGGVGFVSKEMIQAHLPPPAQDIKILRCGPPPMNKAMAAHLEAIE 269

Query: 271 YTSQMQFQF 279
           Y  +MQFQF
Sbjct: 270 YAPEMQFQF 278


>IMGA|Medtr8g047920.1 Nitrate reductase NADH dependant
           chr08_pseudomolecule_IMGAG_V3 10934475-10930918 E
           EGN_Mt090430 20090702
          Length = 288

 Score =  416 bits (1068), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 190/270 (70%), Positives = 228/270 (84%), Gaps = 2/270 (0%)

Query: 10  EMISIAVALFAIGAGTAYYLYITSKKPKGCLDPQNFKEFKLVKRTQLSHNVAKFKFALPT 69
           E+++ A+AL A+G   AY  Y   K PKG LDP+NFKEFKLVK+T +S N A+FKFALPT
Sbjct: 21  EILNGAIALVAVGLTAAYIYY--RKNPKGSLDPKNFKEFKLVKKTMISPNSARFKFALPT 78

Query: 70  PTSVLGLPIGQHMSCRGKDSLGEEVAKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREM 129
           P S+LGLP+G+++  RG+DS GEEV + YTP TLDSD+GYFELV+KMYP G+MSHHFR+M
Sbjct: 79  PNSILGLPVGKNILVRGRDSQGEEVMRSYTPITLDSDIGYFELVVKMYPNGKMSHHFRQM 138

Query: 130 REGDYLAVKGPKGRFKYQPNQVRVFGMLAGGTGITPMFQVTRAILENPNDKTNIHLIYAN 189
           +EGD LAVKGPKGRF Y+P QVR FGM+AGG+GITPMFQV RAILENP DKT ++LIYAN
Sbjct: 139 KEGDNLAVKGPKGRFSYKPGQVRAFGMIAGGSGITPMFQVIRAILENPKDKTKVYLIYAN 198

Query: 190 VTYEDILLKEELDNLANNFPNRFSVYYVLNQPPEGWDGGIGFVSKEMIEKHCPAPAPDVQ 249
           VT +DILLKEELD  A+ FP+RF V++VLN+PP  W+GG G++SKEMIE HCPAPAPD+Q
Sbjct: 199 VTVDDILLKEELDRFADKFPHRFHVFHVLNKPPNQWNGGTGYISKEMIESHCPAPAPDIQ 258

Query: 250 ILRCGPPPMNKAMAAHLEALGYTSQMQFQF 279
           ILRCGPPPMNKA+A HL ALGYTS MQF+F
Sbjct: 259 ILRCGPPPMNKAIATHLAALGYTSNMQFEF 288


>IMGA|Medtr8g119780.1 Nitrate reductase NADH dependant
           chr08_pseudomolecule_IMGAG_V3 27233845-27239990 E
           EGN_Mt090430 20090702
          Length = 325

 Score =  214 bits (544), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 120/298 (40%), Positives = 172/298 (57%), Gaps = 38/298 (12%)

Query: 16  VALFAIGAGTAYYLYITS--------------KKPKGCLDPQNFKEFKLVKRTQLSHNVA 61
            A+ AI  G +Y  Y +S              K     L P  + EFKL    ++SH+  
Sbjct: 32  TAIAAISGGFSYLYYSSSPNLVHSDQIGDEDIKTKNIALIPDKWVEFKLQDTARVSHDTH 91

Query: 62  KFKFALPTPTSVLGLPIGQHMSCR---GKDSLGEE----VAKPYTPTTLDSDLGYFELVI 114
            ++F+   PT  LGL +   +  R   G+D+  EE    V +PYTP +     GYF+L+I
Sbjct: 92  LYRFSF-DPTKKLGLDVASCILTRAPFGQDA--EEKPKYVIRPYTPISDTESKGYFDLLI 148

Query: 115 KMYPQGRMSHHFREMREGDYLAVKGPKGRFKYQPNQVRVFGMLAGGTGITPMFQVTRAIL 174
           K+YP+G+MS HF  ++ GD + VKGP  +FKY PN  +  GM+AGG+GITPM QV  AIL
Sbjct: 149 KVYPEGKMSQHFASLKPGDMVEVKGPIEKFKYTPNMKKNIGMIAGGSGITPMLQVIEAIL 208

Query: 175 ENPNDKTNIHLIYANVTYEDILLKEELDNLANNFPNRFSVYYVLNQPPEGWDGGIGFVSK 234
           +N +DKT I LIYANV+ +DILL+++LD LA + PN   V+Y ++ P + W GG G++SK
Sbjct: 209 KNSDDKTQISLIYANVSPDDILLQQKLDILAKSHPN-LKVFYTVDNPTKTWKGGAGYISK 267

Query: 235 EMIEKHCPAPAPDVQILRCGPPPMNKAMAAH-------------LEALGYTSQMQFQF 279
           +M+ K  PAP+ D  +L CGPP M + ++               L+  GYT QM ++F
Sbjct: 268 DMVVKGLPAPSDDTLVLVCGPPGMMQHISGEKAKDWTQGEVSGILKEAGYTEQMVYKF 325


>IMGA|Medtr3g098300.1 Oxidoreductase FAD/NAD(P)-binding
           chr03_pseudomolecule_IMGAG_V3 23755710-23754389 E
           EGN_Mt090430 20090702
          Length = 421

 Score =  176 bits (446), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 151/254 (59%), Gaps = 26/254 (10%)

Query: 40  LDPQNFKEFKLVKRTQLSHNVAKFKFALPTPTSVLGLPIGQHM-SCRGKDSLGEEVA-KP 97
           ++P+     KLV ++ +SHNV  F+FALP    +LGLPIG+H+  C   D++ E++  + 
Sbjct: 163 INPRERISCKLVSKSSISHNVRIFRFALPYEDQLLGLPIGKHLFLC---DTIEEKLCMRA 219

Query: 98  YTPTTLDSDLGYFELVIKMYPQG---------RMSHHFREMREGDYLAVKGPKGRFKY-- 146
           +TPT+   + GYF+L++K+Y +G          MS H   +  G  L +KGP G  +Y  
Sbjct: 220 FTPTSSVDEKGYFDLLVKIYFKGVHPKFPSGGLMSQHLDSLPIGSILDIKGPLGHIEYIG 279

Query: 147 --------QPNQVRVFGMLAGGTGITPMFQVTRAILENPNDKTNIHLIYANVTYEDILLK 198
                   +    +   MLAGGTGITP++QV +AIL++  D T I+++YAN + +DILL+
Sbjct: 280 RGNFLVHGKHKFAKRLAMLAGGTGITPIYQVVQAILKDLKDLTEIYVVYANRSEDDILLR 339

Query: 199 EELDNLANNFPNRFSVYYVLNQPP-EGWDGGIGFVSKEMIEKHCPAPAPDVQILRCGPPP 257
           EE+D+ +     RF V+YV+ +   EGW   +GF+++ +++KH P  + D   L CGPPP
Sbjct: 340 EEMDSWSKKH-ERFKVWYVVQESKREGWKYNVGFITESILKKHVPEASEDTLALACGPPP 398

Query: 258 MNKAMAAHLEALGY 271
           M   +   LE LGY
Sbjct: 399 MIHGVKFDLENLGY 412


>IMGA|Medtr3g098350.1 Mo-co oxidoreductase dimerisation domain
           chr03_pseudomolecule_IMGAG_V3 23787225-23783668 E
           EGN_Mt090430 20090702
          Length = 921

 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 152/254 (59%), Gaps = 25/254 (9%)

Query: 40  LDPQNFKEFKLVKRTQLSHNVAKFKFALPTPTSVLGLPIGQHM-SCRGKDSLGEEVAKPY 98
           L+P+     KL+ +  +SH+V  F+FALP    +LGLP+G+H+  C   D   +   + Y
Sbjct: 662 LNPREKTSCKLLFKKSISHDVRLFRFALPYEGQLLGLPVGKHIFLCATIDE--KLCMRAY 719

Query: 99  TPTTLDSDLGYFELVIKMYPQG---------RMSHHFREMREGDYLAVKGPKGRFKY--- 146
           TPT+   + G+F+LV+K+Y +G          MS H   M  G  L +KGP G  +Y   
Sbjct: 720 TPTSSVDEKGHFDLVVKIYLKGVHPKFPNGGLMSQHLDSMPIGSTLDIKGPLGHIEYAGR 779

Query: 147 -------QPNQVRVFGMLAGGTGITPMFQVTRAILENPNDKTNIHLIYANVTYEDILLKE 199
                  +    +   MLAGG+GITP++QV +AIL++P D T +H++YAN + +DILL+E
Sbjct: 780 GNFMVHGKHKFAKRLAMLAGGSGITPIYQVVQAILKDPEDLTELHVVYANRSEDDILLRE 839

Query: 200 ELDNLANNFPNRFSVYYVLNQPP-EGWDGGIGFVSKEMIEKHCPAPAPDVQILRCGPPPM 258
           E+D+ A     +F V+YV+ +   EGW+  +GF+++ ++++H P  +PD   L CGPPPM
Sbjct: 840 EMDSWAKKH-EQFKVWYVVQESKREGWEYSVGFITESILKQHVPQASPDTLALVCGPPPM 898

Query: 259 NK-AMAAHLEALGY 271
            + A+  +LE LGY
Sbjct: 899 VQFAVKPNLEKLGY 912


>IMGA|Medtr8g119700.1 Oxidoreductase FAD-binding region
           chr08_pseudomolecule_IMGAG_V3 27195322-27197171 E
           EGN_Mt090430 20090702
          Length = 111

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 7/91 (7%)

Query: 98  YTPTTLDSDLGYFELVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYQPNQVRVFGML 157
           YTP +     GYF+L+IK+YP+GRM+ HF  ++ GD + + G      Y PN  +   M+
Sbjct: 3   YTPISDPEIKGYFDLLIKVYPKGRMTQHFASLKSGDVVQMTG------YNPNIKKNICMI 56

Query: 158 AGGTGITPMFQVTRAILENPNDKTNIHLIYA 188
           AGGTGI PM  +   + +NP +  N  +I+ 
Sbjct: 57  AGGTGINPMLLIFYTV-DNPTENWNGGVIWT 86