Jatropha Genome Database

JcCA0153671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153671.10 + phase: 2 /partial
         (147 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g044090.1 Nucleoside phosphatase GDA1/CD39 chr05_pseu...   142   4e-35

>IMGA|Medtr5g044090.1 Nucleoside phosphatase GDA1/CD39
           chr05_pseudomolecule_IMGAG_V3 18274985-18268211 E
           EGN_Mt090430 20090702
          Length = 364

 Score =  142 bits (359), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/147 (53%), Positives = 93/147 (63%), Gaps = 7/147 (4%)

Query: 3   LSELESAGQHYCEGDWNNLKNQHLGMDDLDLLRYCFSSAYMVALLHDSLGIPMDDKRIGF 62
           LS+L +AGQ YC GDW  LK +++  D+ DLLR+CFSSAY+VALLHDSLGI MDD+RI  
Sbjct: 219 LSKLMTAGQEYCGGDWLKLKKKYVSHDEEDLLRHCFSSAYIVALLHDSLGIDMDDERIKV 278

Query: 63  ANHTSS-HLDWTLGAFILESTLEPLDTEIDN---LDQIVGNEWVTYFSXXXXXXXXXXXX 118
           AN   S  LDW LGAFI+++T    D +I N      I  NE  T  S            
Sbjct: 279 ANQVGSIPLDWALGAFIMQTT---ADADIQNHNWFASIFSNESPTLLSLVGIFVILLFAA 335

Query: 119 XXXXQWRKPQLKTIYDLEKGHYIVTRV 145
               +WRKPQLKTIYDLEKG YI TRV
Sbjct: 336 WSISRWRKPQLKTIYDLEKGRYITTRV 362