Jatropha Genome Database

JcCA0153601.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153601.20 + phase: 0 
         (240 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g137820.1 ALG2-interacting protein X, putative chr01_...   374   e-104

>IMGA|Medtr1g137820.1 ALG2-interacting protein X, putative
           chr01_pseudomolecule_IMGAG_V3 30612171-30608776 E
           EGN_Mt090430 20090702
          Length = 659

 Score =  374 bits (961), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 172/223 (77%), Positives = 197/223 (88%)

Query: 5   SSAAATTNIMLAIYEKKTTSVDLYRPLRNYIAMFYSEREAQNLEDDLQTLKQYRTDVERQ 64
           SSA   TNIMLAI+EKKT +VDLYRPLRNYIA  YSEREAQNLEDDLQTLKQ R+D+ER 
Sbjct: 7   SSAVGNTNIMLAIFEKKTNTVDLYRPLRNYIAFHYSEREAQNLEDDLQTLKQLRSDLERH 66

Query: 65  SDPSPTSRRDLLQNYYKALCLVETRFPISPDKDHINSVTFVWYDAFKQKQKASQQNIHLE 124
           SDPS  +RRDL   Y+KALC  ETRFPIS + DH+N++TFVW+DAFK KQKASQQNIHLE
Sbjct: 67  SDPSLPARRDLFITYFKALCQTETRFPISSEPDHVNALTFVWFDAFKPKQKASQQNIHLE 126

Query: 125 KAAILFNLGAVYSQIGLSFDRTTVEGRRQAIHSFIAAAGAFAYLRDNAATKASMGSSTTV 184
           K A+LFNL AVYSQIGL+FDR TV+GRRQA H+F+AAAG+F +LR+NA+ K S+GSSTT+
Sbjct: 127 KGAVLFNLAAVYSQIGLTFDRNTVDGRRQASHAFMAAAGSFGFLRENASMKISVGSSTTL 186

Query: 185 DVSVECVGMLERLMLAQAQECVFENTIAKGSTPGVCAKIARQV 227
           D+SVEC GMLE+LMLAQAQECVFENTIAKGSTPGVCAKI+RQV
Sbjct: 187 DLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQV 229