Jatropha Genome Database

JcCA0153601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153601.10 - phase: 0 
         (280 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase ...   253   7e-68
IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase ...   253   9e-68
IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase ...   251   3e-67
IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase ...   129   2e-30
IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase ...    65   3e-11
IMGA|Medtr5g078690.1 Di-trans-poly-cis-decaprenylcistransferase ...    60   1e-09
IMGA|Medtr5g078720.1 Di-trans-poly-cis-decaprenylcistransferase ...    59   3e-09

>IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26316000-26314195 E
           EGN_Mt090430 20090702
          Length = 251

 Score =  253 bits (646), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 2/179 (1%)

Query: 10  MGVLASFIRSCLFHVLSVGPIPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKY 69
           +G L   +R C+F VLS GP+P+H+AFIMDGNRR+A++  +G G GHKAGFSAL+ +L+Y
Sbjct: 45  LGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNMGEGDGHKAGFSALLSVLRY 104

Query: 70  CYELGVKYVTVYAFSIDNFRRRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNL 129
           CYELG+KYVTVYAFSIDNFRR+P+EV+  M+LM EKIE +L++ES++N+YG+R++F+GN+
Sbjct: 105 CYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIINEYGVRLHFIGNM 164

Query: 130 NLLTEPVRVAAQKVMKATASNTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDK 188
            LLTEPVRVAA+K M+ TA N + +L ICVAYTS DEI+HAV ESCKDK   N I P K
Sbjct: 165 QLLTEPVRVAAEKAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKDKW--NEIQPSK 221


>IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26461750-26464002 E
           EGN_Mt090430 20090702
          Length = 360

 Score =  253 bits (645), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 2/179 (1%)

Query: 10  MGVLASFIRSCLFHVLSVGPIPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKY 69
           +G L   +R C+F VLS GP+P+H+AFIMDGNRR+A++  +G G GHKAGFSAL+ +L+Y
Sbjct: 13  LGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNMGEGDGHKAGFSALLSVLRY 72

Query: 70  CYELGVKYVTVYAFSIDNFRRRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNL 129
           CYELG+KYVTVYAFSIDNFRR+P+EV+  M+LM EKIE +L++ES++N+YG+R++F+GN+
Sbjct: 73  CYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIINEYGVRLHFIGNM 132

Query: 130 NLLTEPVRVAAQKVMKATASNTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDK 188
            LLTEPVRVAA+K M+ TA N + +L ICVAYTS DEI+HAV ESCKDK   N I P K
Sbjct: 133 QLLTEPVRVAAEKAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKDKW--NEIQPSK 189



 Score =  140 bits (354), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 63/79 (79%), Positives = 72/79 (91%)

Query: 201 SIKLVDLEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLV 260
           SIKLVD+EKHMYMA+ P+PD+LIRTSGE+RLSNFLLWQTS C LY+P  LWPEIGL +LV
Sbjct: 281 SIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSACPLYAPKVLWPEIGLRHLV 340

Query: 261 WAVLNFQRNHSYLEKKKKR 279
           WAVLNFQR+H YLEKKKK+
Sbjct: 341 WAVLNFQRHHFYLEKKKKQ 359


>IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase
           chr08_pseudomolecule_IMGAG_V3 18527683-18528833 E
           EGN_Mt090430 20090702
          Length = 360

 Score =  251 bits (641), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 113/179 (63%), Positives = 148/179 (82%), Gaps = 2/179 (1%)

Query: 10  MGVLASFIRSCLFHVLSVGPIPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKY 69
           +G L   +R C+F VLS GP+P+H+AFIMDGNRR+A++  LG G GHKAGFSAL+ +L+Y
Sbjct: 13  LGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNLGEGDGHKAGFSALLSVLRY 72

Query: 70  CYELGVKYVTVYAFSIDNFRRRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNL 129
           CYELG+KYVTVYAFSIDNFRR+P+EV+  M+LM EKIE +L++ES++N+YG+R++F+GN+
Sbjct: 73  CYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIINEYGVRLHFIGNM 132

Query: 130 NLLTEPVRVAAQKVMKATASNTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDK 188
            LLTEPVR+AA++ M+ TA N + +L ICVAYTS DEI+HAV ESCKDK   N I P K
Sbjct: 133 QLLTEPVRIAAERAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKDKW--NEIQPSK 189



 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 71/79 (89%)

Query: 201 SIKLVDLEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLV 260
           SIKLVD+EKHMYM + P+PD+LIRTSGE+RLSNFLLWQTS C LY+P  LWPEIGL +LV
Sbjct: 281 SIKLVDIEKHMYMTVAPDPDILIRTSGEARLSNFLLWQTSACPLYAPKVLWPEIGLRHLV 340

Query: 261 WAVLNFQRNHSYLEKKKKR 279
           WAVLNFQR+H YLEKKKK+
Sbjct: 341 WAVLNFQRHHFYLEKKKKQ 359


>IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29148457-29146350 E
           EGN_Mt090430 20090702
          Length = 310

 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 125/244 (51%), Gaps = 16/244 (6%)

Query: 30  IPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKYCYELGVKYVTVYAFSIDNFR 89
           +P H+A IMDGN R+AK   L   AGH AG  +L  ++  CY  G+K +TV+AFS DN+ 
Sbjct: 78  MPKHVAVIMDGNGRWAKMRGLPASAGHVAGIKSLRRMVMLCYSWGIKVLTVFAFSTDNWI 137

Query: 90  RRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNLNLLTEPVRVAAQKVMKATAS 149
           R   EV+ +M L    I     E   + + GI++  +G+ + L + ++       ++T  
Sbjct: 138 RPKVEVEFLMSLFERTINS---EIEALEREGIQISVIGDTSKLPKSLKSMIASAEESTKE 194

Query: 150 NTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDKPCTDAIEGEEKDSIKLVDLEK 209
           N K  L + V+Y+   +++ A    CK    K          D I   E  +  +++ E 
Sbjct: 195 NPKFQLILAVSYSGKYDLVQA----CKSVAQK--------VQDGIIHLEDINENIIEKEL 242

Query: 210 HMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLNFQ-R 268
                  P PD+LIRTSGE R+SNFLLWQ ++  L+    LWP+ G    + A+ +FQ R
Sbjct: 243 ETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFNRKLWPDFGKDEFIEALTSFQNR 302

Query: 269 NHSY 272
              Y
Sbjct: 303 QRRY 306


>IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29154047-29152742 E
           EGN_Mt090430 20090702
          Length = 215

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 6/102 (5%)

Query: 30  IPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKYCYELGVKYVTVYAFSIDNFR 89
           IP H+A IMDGN R+AK   L    GH AG  +L  ++K C    +K +T++ FS DN+ 
Sbjct: 81  IPKHVAVIMDGNGRWAKMRGLPLSEGHTAGMQSLKTMVKMCLRWEIKVLTIFMFSTDNWI 140

Query: 90  RRPEEVKIVMDLMLEKI-----EGILKEESVVNQYGIRVYFL 126
           R   EV+ +  L LE+I     E I++ E++     I V  +
Sbjct: 141 RPKLEVEFLFSL-LERIINSETEAIMRYETLTATLFIAVTLV 181


>IMGA|Medtr5g078690.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29150574-29150149 H
           EGN_Mt090430 20090702
          Length = 141

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 16/124 (12%)

Query: 163 SLDEIIHAVHESCKD----KLIKNTIFPDK-----PCTDAIEGEEKDSIKLVDLEKHMYM 213
           SL  +I +V ES K+    +LI    +  K      C    +  +  S+ L D+++++  
Sbjct: 11  SLQRMISSVEESTKNHSKLQLIAAINYGGKYDVVQACKSVAKKVQDGSLHLEDIDENIIE 70

Query: 214 -------ALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLNF 266
                     P PD+LIRTSGE R+SNF+LWQ ++  L+    LWP+ G    V A+  F
Sbjct: 71  KELETKCTEFPNPDLLIRTSGELRVSNFMLWQLAYAELFFNQKLWPDFGKDEFVEALSFF 130

Query: 267 QRNH 270
           Q+  
Sbjct: 131 QKRQ 134


>IMGA|Medtr5g078720.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29165122-29164507 H
           EGN_Mt090430 20090702
          Length = 151

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 18/151 (11%)

Query: 121 IRVYFLGNLNLLTEPVRVAAQKVMKATASNTKCLLFICVAYTSLDEIIHA---VHESCKD 177
           I++  +G+ + L + ++     + + T  N++  L + + Y    +++ A   V +  +D
Sbjct: 6   IKISVIGDSSKLPKSLQKMIAIIEEKTKDNSRLHLIVAINYGGRYDVVQACKSVTKKVQD 65

Query: 178 KLIKNTIFPDKPCTDAIEGEEKDSIKLVDLEKHMYMALGPEPDVLIRTSGESRLSNFLLW 237
           ++I             +E  +++ IK  DLE        P PD+LIRT GE R+SNFLLW
Sbjct: 66  RIIH------------LEDIDENIIK-NDLETKCIEF--PYPDLLIRTGGELRVSNFLLW 110

Query: 238 QTSHCTLYSPDALWPEIGLWNLVWAVLNFQR 268
           Q ++  L+    LWP+    + V A+ +FQ+
Sbjct: 111 QLAYTELFFNRKLWPDFEKNDFVEALSSFQQ 141