Jatropha Genome Database
- JcCA0153501.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0153501.20 + phase: 0 /pseudo/partial
(196 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g139670.1 Sodium/hydrogen exchanger subfamily chr08_p... 199 7e-52
IMGA|Medtr3g076690.1 Sodium/hydrogen exchanger chr03_pseudomolec... 172 7e-44
IMGA|Medtr1g099020.1 Sodium/hydrogen exchanger 1, putative chr01... 164 3e-41
IMGA|Medtr1g099040.1 Sodium/hydrogen exchanger chr01_pseudomolec... 145 2e-35
IMGA|Medtr7g140080.1 Sodium/hydrogen exchanger chr07_pseudomolec... 121 3e-28
IMGA|Medtr7g140090.1 Sodium/hydrogen exchanger 1, putative chr07... 63 8e-11
>IMGA|Medtr8g139670.1 Sodium/hydrogen exchanger subfamily
chr08_pseudomolecule_IMGAG_V3 34143178-34147276 E
EGN_Mt090430 20090702
Length = 529
Score = 199 bits (506), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 125/167 (74%)
Query: 6 GSLVVRLGLKSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVI 65
G+L +L SD V S+ +FV L+C CI+IGHLLE+NRW+NESITAL IGLCTGV+
Sbjct: 5 GALYEKLTTMFTSDHASVVSLNIFVALLCTCIVIGHLLEENRWINESITALLIGLCTGVL 64
Query: 66 ILLTTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISF 125
IL TT G+SSH+ +F E LFFIY+LPPIIFNAGFQVKKKQFFRNFMTI+LFGA+GTLISF
Sbjct: 65 ILFTTGGRSSHIMVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAIGTLISF 124
Query: 126 IIISVGSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
IIS+G+ F+KL+I L DYL A+ + VC+L + E
Sbjct: 125 CIISLGAIHFFQKLDIGSLKIGDYLAIGAIFSATDSVCTLQVLNQDE 171
>IMGA|Medtr3g076690.1 Sodium/hydrogen exchanger
chr03_pseudomolecule_IMGAG_V3 17775078-17769363 E
EGN_Mt090430 20090702
Length = 532
Score = 172 bits (437), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 114/166 (68%), Gaps = 6/166 (3%)
Query: 17 GSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKSSH 76
D V +TLFV ++C C++IGHLLE++RW+NESI A+ +GL G+I+LL T+GKSSH
Sbjct: 22 AHDHAQVVPMTLFVAVLCLCLVIGHLLEESRWINESIVAIFVGLIAGMILLLVTKGKSSH 81
Query: 77 LFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLF 136
+ FDE LFFIY+LPPIIFNAGFQVKKKQFF NF+TI+LFG +G IS II+ GS LF
Sbjct: 82 ILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISTFIITSGSWLLF 141
Query: 137 KKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTREILHLDAAIVL 182
KLN L DYL + + VC+L ++LH D +L
Sbjct: 142 PKLNFHNLTVRDYLALGTIFSSTDTVCTL------QVLHQDETPLL 181
>IMGA|Medtr1g099020.1 Sodium/hydrogen exchanger 1, putative
chr01_pseudomolecule_IMGAG_V3 20125150-20128407 E
EGN_Mt090430 20090702
Length = 408
Score = 164 bits (415), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 111/148 (75%)
Query: 25 SITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKSSHLFLFDEHL 84
S+ +F L+CACII+GHLLE+ RW +ESI AL +GLC+GV++LL T+ +S+ + +F+E L
Sbjct: 20 SLCVFFALLCACIIVGHLLEEYRWASESIIALLLGLCSGVVVLLVTKFRSTEILIFNEDL 79
Query: 85 FFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLFKKLNIDFL 144
FF+Y+LPPIIFNAGFQVKKKQFFRNF TI+LFG +GT+ISF +ISVG+ LF ++ I L
Sbjct: 80 FFLYLLPPIIFNAGFQVKKKQFFRNFTTILLFGVLGTVISFCVISVGAFLLFNRIGITNL 139
Query: 145 DTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
D+L A+ + VC+L + E
Sbjct: 140 SIKDHLAIGAILSATDSVCTLQVLSQDE 167
>IMGA|Medtr1g099040.1 Sodium/hydrogen exchanger
chr01_pseudomolecule_IMGAG_V3 20130256-20133867 H
EGN_Mt090430 20090702
Length = 502
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 89/107 (83%)
Query: 25 SITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKSSHLFLFDEHL 84
++ +F L+CACIIIGHLLE +RW NESITAL +GLC+G+++LL T +S + +F+E L
Sbjct: 25 ALCVFFALLCACIIIGHLLEDSRWANESITALFLGLCSGLVVLLVTNFQSHDILVFNEDL 84
Query: 85 FFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVG 131
FF+Y+LPPIIFNAGFQVKKK+FFRNF I+LFG +GT+ISF +IS+
Sbjct: 85 FFLYLLPPIIFNAGFQVKKKRFFRNFNHILLFGVLGTVISFCLISLA 131
>IMGA|Medtr7g140080.1 Sodium/hydrogen exchanger
chr07_pseudomolecule_IMGAG_V3 33654431-33651774 E
EGN_Mt090430 20090702
Length = 380
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 83/114 (72%)
Query: 59 GLCTGVIILLTTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGA 118
GLCTGV+IL + GKSSHL +F E LFFIY+LPPIIFNAGFQVKKK+FF NF+TI+ FGA
Sbjct: 14 GLCTGVVILWISGGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKRFFVNFITIMSFGA 73
Query: 119 VGTLISFIIISVGSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
VGTLIS II+ G +++FK++ I LD + + A+ + VC+L + E
Sbjct: 74 VGTLISCSIITFGVSQIFKRMGIGTLDLGEAVAIGAIFAATDSVCTLQVLNQDE 127
>IMGA|Medtr7g140090.1 Sodium/hydrogen exchanger 1, putative
chr07_pseudomolecule_IMGAG_V3 33655216-33654433 F
EGN_Mt090430 20090702
Length = 68
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 9 VVRLGLKSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITAL 56
V L + + SD + S+ LFV L+CACI+IGHLLE+NRW+NESITAL
Sbjct: 3 VESLQMLTTSDYASIISMNLFVALLCACIVIGHLLEENRWVNESITAL 50