Jatropha Genome Database

JcCA0152991.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152991.20 + phase: 2 /partial
         (154 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g005450.3 hypothetical protein chr04_pseudomolecule_I...   176   5e-45
IMGA|Medtr4g005450.2 hypothetical protein chr04_pseudomolecule_I...   175   9e-45
IMGA|Medtr4g005450.1 hypothetical protein chr04_pseudomolecule_I...   167   2e-42
IMGA|Medtr8g120490.1 hypothetical protein chr08_pseudomolecule_I...   159   7e-40
IMGA|Medtr8g120200.1 hypothetical protein chr08_pseudomolecule_I...   159   7e-40
IMGA|Medtr3g136970.1 hypothetical protein chr03_pseudomolecule_I...   155   1e-38
IMGA|Medtr3g137280.1 hypothetical protein chr03_pseudomolecule_I...   150   4e-37
IMGA|Medtr3g136980.2 hypothetical protein chr03_pseudomolecule_I...   110   3e-25
IMGA|Medtr3g136980.1 hypothetical protein chr03_pseudomolecule_I...   110   3e-25
IMGA|Medtr4g005450.4 hypothetical protein chr04_pseudomolecule_I...   105   1e-23
IMGA|Medtr1g013780.1 hypothetical protein chr01_pseudomolecule_I...   103   4e-23

>IMGA|Medtr4g005450.3 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 234367-238495 E
           EGN_Mt090430 20090702
          Length = 156

 Score =  176 bits (445), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 114/155 (73%), Gaps = 4/155 (2%)

Query: 1   GCFGCCAKPSTINAVDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSI 60
           GC GC  +P+ +  V+  S GL  + +   + S  +DFW++S  DMD S VQSQ S SS 
Sbjct: 5   GCVGCYKRPALV-TVEVPSTGLTKQGKAVDKPSTSEDFWTTSTHDMDNSAVQSQGSISST 63

Query: 61  SALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNK-KQVREPTIRWNAT 119
           S  NQ    +A+A S++NPSEFVN+GL+LW QTRQ+W+ NK+  N+ +Q+REP + WNAT
Sbjct: 64  SLTNQAV--AAHASSSNNPSEFVNHGLILWNQTRQRWVGNKKPENRTQQLREPKLSWNAT 121

Query: 120 YENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLYD 154
           YE+LL SNKPF +PIPLAEMVDFLVD+WEQ+GLYD
Sbjct: 122 YESLLTSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 156


>IMGA|Medtr4g005450.2 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 233672-238495 E
           EGN_Mt090430 20090702
          Length = 251

 Score =  175 bits (443), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 114/155 (73%), Gaps = 4/155 (2%)

Query: 1   GCFGCCAKPSTINAVDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSI 60
           GC GC  +P+ +  V+  S GL  + +   + S  +DFW++S  DMD S VQSQ S SS 
Sbjct: 100 GCVGCYKRPALV-TVEVPSTGLTKQGKAVDKPSTSEDFWTTSTHDMDNSAVQSQGSISST 158

Query: 61  SALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNK-KQVREPTIRWNAT 119
           S  NQ    +A+A S++NPSEFVN+GL+LW QTRQ+W+ NK+  N+ +Q+REP + WNAT
Sbjct: 159 SLTNQAV--AAHASSSNNPSEFVNHGLILWNQTRQRWVGNKKPENRTQQLREPKLSWNAT 216

Query: 120 YENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLYD 154
           YE+LL SNKPF +PIPLAEMVDFLVD+WEQ+GLYD
Sbjct: 217 YESLLTSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 251


>IMGA|Medtr4g005450.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 233672-238495 E
           EGN_Mt090430 20090702
          Length = 265

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/169 (52%), Positives = 115/169 (68%), Gaps = 18/169 (10%)

Query: 1   GCFGCCAKPSTINAVDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSI 60
           GC GC  +P+ +  V+  S GL  + +   + S  +DFW++S  DMD S VQSQ S SS 
Sbjct: 100 GCVGCYKRPALV-TVEVPSTGLTKQGKAVDKPSTSEDFWTTSTHDMDNSAVQSQGSISST 158

Query: 61  SALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNK-KQVREPTIR---- 115
           S  NQ    +A+A S++NPSEFVN+GL+LW QTRQ+W+ NK+  N+ +Q+REP +R    
Sbjct: 159 SLTNQAV--AAHASSSNNPSEFVNHGLILWNQTRQRWVGNKKPENRTQQLREPKLRTYFQ 216

Query: 116 ----------WNATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLYD 154
                     WNATYE+LL SNKPF +PIPLAEMVDFLVD+WEQ+GLYD
Sbjct: 217 CLAKFFWLCSWNATYESLLTSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 265


>IMGA|Medtr8g120490.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 27558809-27563283 E
           EGN_Mt090430 20090702
          Length = 177

 Score =  159 bits (401), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 79/159 (49%), Positives = 108/159 (67%), Gaps = 6/159 (3%)

Query: 1   GCFGCCAKPSTINAVDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSI 60
           GCFGCC KP+ I AVD+ +KGLRI+ +  ++ +  D FWSSS  D+D S +QSQRS SS+
Sbjct: 18  GCFGCCVKPTPIIAVDEPAKGLRIQGQTMRKPTTSDGFWSSSPCDLDNSTIQSQRSISSV 77

Query: 61  SALNQPFDPSANAGSTSNPSEFVN-----YGLLLWKQTRQQWLANKRSPNK-KQVREPTI 114
           S LNQ    S  A +     EFVN     +GL LW ++R QW+    S  + +Q +E  +
Sbjct: 78  STLNQILYQSNGASTPGTEPEFVNQGKSYFGLHLWNESRLQWVGRGLSEKQNQQKQESRL 137

Query: 115 RWNATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLY 153
             NATYE+LLG+ +PFP+ +PL+EMV+FLVDVWE+EG+Y
Sbjct: 138 NRNATYESLLGTRQPFPKSVPLSEMVEFLVDVWEREGMY 176


>IMGA|Medtr8g120200.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 27429281-27432874 E
           EGN_Mt090430 20090702
          Length = 177

 Score =  159 bits (401), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 79/159 (49%), Positives = 108/159 (67%), Gaps = 6/159 (3%)

Query: 1   GCFGCCAKPSTINAVDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSI 60
           GCFGCC KP+ I AVD+ +KGLRI+ +  ++ +  D FWSSS  D+D S +QSQRS SS+
Sbjct: 18  GCFGCCVKPTPIIAVDEPAKGLRIQGQTMRKPTTSDGFWSSSPCDLDNSTIQSQRSISSV 77

Query: 61  SALNQPFDPSANAGSTSNPSEFVN-----YGLLLWKQTRQQWLANKRSPNK-KQVREPTI 114
           S LNQ    S  A +     EFVN     +GL LW ++R QW+    S  + +Q +E  +
Sbjct: 78  STLNQILYQSNGASTPGTEPEFVNQGKSYFGLHLWNESRLQWVGRGLSEKQNQQKQESRL 137

Query: 115 RWNATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLY 153
             NATYE+LLG+ +PFP+ +PL+EMV+FLVDVWE+EG+Y
Sbjct: 138 NRNATYESLLGTRQPFPKSVPLSEMVEFLVDVWEREGMY 176


>IMGA|Medtr3g136970.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 34656321-34660945 E
           EGN_Mt090430 20090702
          Length = 181

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/163 (53%), Positives = 112/163 (68%), Gaps = 9/163 (5%)

Query: 1   GCFGCCAKPSTINAVD-QSSKGLRIKDERAKQHSIPDDF-WSSSAGDMDYSGVQSQRSAS 58
           GC GC +KP  I+  +  +SKGL+ + +     +  DDF WSSSA ++D+  +QSQRS S
Sbjct: 19  GCLGCFSKPLVISMGEADASKGLKTQAQTMNNDNRSDDFFWSSSAIELDHGAIQSQRSIS 78

Query: 59  SISALNQPFDPSANAGSTSNPSEFVNYG-------LLLWKQTRQQWLANKRSPNKKQVRE 111
           SIS  N P DP ++ G  ++  EFVN+G       LLLW QTRQQW+ NKRS   KQV E
Sbjct: 79  SISVSNHPSDPQSSDGIQTDSPEFVNHGKFALKTSLLLWNQTRQQWVGNKRSGRPKQVGE 138

Query: 112 PTIRWNATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLYD 154
           P + WNATYE+LLG+NKPFP  IPL EM+DFLVD+WE EG+YD
Sbjct: 139 PKLSWNATYESLLGTNKPFPERIPLGEMIDFLVDIWELEGMYD 181


>IMGA|Medtr3g137280.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 34782750-34787373 E
           EGN_Mt090430 20090702
          Length = 192

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/174 (50%), Positives = 112/174 (64%), Gaps = 20/174 (11%)

Query: 1   GCFGCCAKPSTINAVD-QSSKGLRIKDERAKQHSIPDDF-WSSSAGDMDYSGVQSQRSAS 58
           GC GC +KP  I+  +  +SKGL+ + +     +  DDF WSSSA ++D+  +QSQRS S
Sbjct: 19  GCLGCFSKPLVISMGEADASKGLKTQAQTMNNDNRSDDFFWSSSAIELDHGAIQSQRSIS 78

Query: 59  SISALNQPFDPSANAGSTSNPSEFVNYG------------------LLLWKQTRQQWLAN 100
           SIS  N P DP ++ G  ++  EFVN+G                  LLLW QTRQQW+ N
Sbjct: 79  SISVSNHPSDPQSSDGIQTDSPEFVNHGKFAVIFQFIYYHPSICICLLLWNQTRQQWVGN 138

Query: 101 KRSPNKKQVREPTIRWNATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLYD 154
           KRS   KQV EP + WNATYE+LLG+NKPFP  IPL EM+DFLVD+WE EG+YD
Sbjct: 139 KRSGRPKQVGEPKLSWNATYESLLGTNKPFPERIPLGEMIDFLVDIWELEGMYD 192


>IMGA|Medtr3g136980.2 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 34656321-34661529 F
           EGN_Mt090430 20090702
          Length = 121

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 56/68 (82%)

Query: 87  LLLWKQTRQQWLANKRSPNKKQVREPTIRWNATYENLLGSNKPFPRPIPLAEMVDFLVDV 146
           LLLW QTRQQW+ NKRS   KQV EP + WNATYE+LLG+NKPFP  IPL EM+DFLVD+
Sbjct: 54  LLLWNQTRQQWVGNKRSGRPKQVGEPKLSWNATYESLLGTNKPFPERIPLGEMIDFLVDI 113

Query: 147 WEQEGLYD 154
           WE EG+YD
Sbjct: 114 WELEGMYD 121


>IMGA|Medtr3g136980.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 34656321-34661529 F
           EGN_Mt090430 20090702
          Length = 127

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 56/68 (82%)

Query: 87  LLLWKQTRQQWLANKRSPNKKQVREPTIRWNATYENLLGSNKPFPRPIPLAEMVDFLVDV 146
           LLLW QTRQQW+ NKRS   KQV EP + WNATYE+LLG+NKPFP  IPL EM+DFLVD+
Sbjct: 60  LLLWNQTRQQWVGNKRSGRPKQVGEPKLSWNATYESLLGTNKPFPERIPLGEMIDFLVDI 119

Query: 147 WEQEGLYD 154
           WE EG+YD
Sbjct: 120 WELEGMYD 127


>IMGA|Medtr4g005450.4 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 234367-237400 E
           EGN_Mt090430 20090702
          Length = 117

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 4/116 (3%)

Query: 1   GCFGCCAKPSTINAVDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSI 60
           GC GC  +P+ +  V+  S GL  + +   + S  +DFW++S  DMD S VQSQ S SS 
Sbjct: 5   GCVGCYKRPALV-TVEVPSTGLTKQGKAVDKPSTSEDFWTTSTHDMDNSAVQSQGSISST 63

Query: 61  SALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNK-KQVREPTIR 115
           S  NQ    +A+A S++NPSEFVN+GL+LW QTRQ+W+ NK+  N+ +Q+REP +R
Sbjct: 64  SLTNQAV--AAHASSSNNPSEFVNHGLILWNQTRQRWVGNKKPENRTQQLREPKLR 117


>IMGA|Medtr1g013780.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 2664571-2666555 E
           EGN_Mt090430 20090702
          Length = 133

 Score =  103 bits (256), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 82/140 (58%), Gaps = 7/140 (5%)

Query: 15  VDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSISALNQPFDPSANAG 74
           +D+  KG  I+ +   +      FWSSS  + D+S  +S+RS SS          + +  
Sbjct: 1   MDEGCKGEIIQGQTVTKDDGSSGFWSSSTFEKDHSEARSRRSVSSSGI-------TMSIS 53

Query: 75  STSNPSEFVNYGLLLWKQTRQQWLANKRSPNKKQVREPTIRWNATYENLLGSNKPFPRPI 134
           S    S      L+ W Q RQQW  NKRS  +   REP I  NATYE++LG+NKPFP+PI
Sbjct: 54  SDLQSSSSSQIRLVQWNQIRQQWAGNKRSERQTVAREPRISSNATYEDILGNNKPFPQPI 113

Query: 135 PLAEMVDFLVDVWEQEGLYD 154
           PL EMV FLVD+WEQEGLYD
Sbjct: 114 PLREMVYFLVDIWEQEGLYD 133