Jatropha Genome Database

JcCA0152721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152721.10 + phase: 0 /partial
         (296 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g026090.1 S-adenosylmethionine decarboxylase chr02_ps...   246   8e-66
IMGA|Medtr8g140130.1 S-adenosylmethionine decarboxylase chr08_ps...   239   1e-63

>IMGA|Medtr2g026090.1 S-adenosylmethionine decarboxylase
           chr02_pseudomolecule_IMGAG_V3 7061157-7059737 E
           EGN_Mt090430 20090702
          Length = 351

 Score =  246 bits (629), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 136/297 (45%), Positives = 185/297 (62%), Gaps = 18/297 (6%)

Query: 9   GFEGYEKRLEVSFSEPGFFADPG-----GMGLRSLSKAQIDEILKPAECTIVDSLSNDHV 63
           GFEG+EKRLE+ F    F  DP       +GLR L    I +IL+  +CT+V ++ N + 
Sbjct: 5   GFEGFEKRLELHF----FGDDPNPTINHQLGLRKLEFESIQQILQAVQCTVVSAVGNSYF 60

Query: 64  DSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGT-LSLTVHSVRYSRGSFIFPG 122
           D+YVLSESSLF+YP K+IIKTCGTT+LL SI  ++  A T L+ T+ SV Y+RGSFIFP 
Sbjct: 61  DAYVLSESSLFVYPTKIIIKTCGTTQLLKSIIPLIYFANTHLNFTLSSVSYTRGSFIFPN 120

Query: 123 AQSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASLDTGRHSSSVQ-T 181
           +Q FPH SF+EEV+ L+           A +M S   +  WHV++A+ +   H    Q T
Sbjct: 121 SQPFPHTSFNEEVSYLENTIPSNLCFRKASIMPSKSSSHSWHVFTATQNPHHHIPYEQYT 180

Query: 182 LEMCMTGLDRDRASVFYKTP------ASSAAGMTEESGIRKILPQSEICDFDFEPCGYSM 235
           +E+CMT LD   A  F++ P       SS   MTE +GI +I  ++ ICDF F+PCGYSM
Sbjct: 181 MEICMTELDPILAGKFFRRPDEEKSGNSSGNQMTELTGINEINKEAFICDFAFDPCGYSM 240

Query: 236 NSIEGGAISTIHVTPEDGFSYASFEAVG-YNLEQVKLTLLLERVLACFEPAEFSIAL 291
           N ++G   STIHVTPEDG+SYASFE VG  +     +  +L +V+  F P   S+++
Sbjct: 241 NGMDGECYSTIHVTPEDGYSYASFECVGSISDNDDNIVHMLRKVVQIFRPGTMSVSI 297


>IMGA|Medtr8g140130.1 S-adenosylmethionine decarboxylase
           chr08_pseudomolecule_IMGAG_V3 34332981-34331643 E
           EGN_Mt090430 20090702
          Length = 346

 Score =  239 bits (610), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/304 (44%), Positives = 180/304 (59%), Gaps = 33/304 (10%)

Query: 9   GFEGYEKRLEVSFSEPGFFADP--GGMGLRSLSKAQIDEILKPAECTIVDSLSNDHVDSY 66
           GFEG+EKRLE+ F    F  DP    +GLR +    I ++L+  +CT+V ++ N + D+Y
Sbjct: 5   GFEGFEKRLELHF----FGDDPITFQLGLRKIDFESIQQVLEAVQCTVVSAVGNSYFDAY 60

Query: 67  VLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIFPGAQSF 126
           VLSESSLF+YP K+IIKTCGTT+LL SI  ++  A    LT+ S RY+RGSFIFP AQ F
Sbjct: 61  VLSESSLFVYPTKIIIKTCGTTQLLKSILPLIHYANQTGLTLCSCRYTRGSFIFPNAQPF 120

Query: 127 PHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASLDTGRHSS--------- 177
           P+ SF++EV  L+           A +M S   +  WHV++A      HSS         
Sbjct: 121 PYTSFNDEVTYLEDTIPSNLCHRKASIMPSKSSSHSWHVFTA------HSSITHHNHSHT 174

Query: 178 ----SVQTLEMCMTGLDRDRASVFYKTPASSAAG------MTEESGIRKILPQSEICDFD 227
                + T+E+CMT LD   A  F++ P     G      MTE +GI +I P + ICDF 
Sbjct: 175 HSDIDIFTMEICMTELDPILARKFFRPPGDGKTGDSAGKEMTELTGINEINPNAFICDFA 234

Query: 228 FEPCGYSMNSIEGGAISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEF 287
           F+PCGYSMN ++    STIHVTPEDGFSYASFE VG   + +    +L +V+  F P   
Sbjct: 235 FDPCGYSMNGMDDDWYSTIHVTPEDGFSYASFECVGSVNDNI--VHVLRKVVQIFRPGTM 292

Query: 288 SIAL 291
           SI++
Sbjct: 293 SISM 296