Jatropha Genome Database
- JcCA0152621.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0152621.10 - phase: 0 /partial
(158 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g079920.1 Response regulator receiver; CCT chr04_pseu... 182 7e-47
IMGA|Medtr7g146130.1 Response regulator receiver; CCT chr07_pseu... 131 2e-31
IMGA|Medtr3g122660.1 Response regulator receiver chr03_pseudomol... 130 4e-31
IMGA|Medtr3g122660.2 Response regulator receiver chr03_pseudomol... 130 4e-31
IMGA|AC232874_6.1 Response regulator receiver AC232874.1 20706-2... 80 4e-16
IMGA|Medtr8g146130.1 Response regulator, RegA/PrrA/ActR type; Ho... 80 5e-16
IMGA|AC235748_5.1 Response regulator receiver; Myb-like DNA-bind... 80 5e-16
IMGA|Medtr8g146120.1 Response regulator, RegA/PrrA/ActR type; Ho... 77 3e-15
IMGA|Medtr3g138060.1 Myb, DNA-binding; Response regulator receiv... 76 5e-15
IMGA|Medtr8g146140.1 Response regulator receiver; Myb-like DNA-b... 72 1e-13
IMGA|Medtr3g102990.1 Myb, DNA-binding; Response regulator receiv... 70 6e-13
IMGA|Medtr5g037580.1 Response regulator receiver chr05_pseudomol... 69 1e-12
IMGA|Medtr8g124910.1 Response regulator receiver chr08_pseudomol... 65 2e-11
IMGA|AC235748_7.1 Response regulator receiver; Myb-like DNA-bind... 62 9e-11
IMGA|Medtr8g039500.1 Response regulator receiver chr08_pseudomol... 62 1e-10
IMGA|Medtr4g142310.1 Response regulator receiver chr04_pseudomol... 58 2e-09
IMGA|Medtr4g142200.1 Response regulator receiver chr04_pseudomol... 58 2e-09
IMGA|Medtr5g014220.1 Myb, DNA-binding; Response regulator receiv... 57 4e-09
IMGA|Medtr5g014220.2 Myb, DNA-binding; Response regulator receiv... 57 5e-09
IMGA|Medtr4g156880.1 Response regulator, RegA/PrrA/ActR type; Ho... 54 4e-08
IMGA|Medtr3g019360.1 Response regulator receiver chr03_pseudomol... 51 3e-07
IMGA|Medtr4g025080.1 Response regulator, RegA/PrrA/ActR type; Ho... 49 1e-06
IMGA|Medtr7g027130.1 Myb, DNA-binding; Response regulator receiv... 47 3e-06
IMGA|AC232874_22.1 Response regulator receiver; Myb-like DNA-bin... 47 3e-06
>IMGA|Medtr4g079920.1 Response regulator receiver; CCT
chr04_pseudomolecule_IMGAG_V3 16245711-16238402 E
EGN_Mt090430 20090702
Length = 796
Score = 182 bits (462), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
V AV NGLQAWK+LED NH DLVLTE+ MP V+GIGLLCKIM+HKT KNIPVIMMS HD
Sbjct: 115 VNAVSNGLQAWKVLEDPGNHIDLVLTEIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHD 174
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKCHXXXXXXXXXXXXXXVQTQXXXX 122
SM IVFKCLSKGA DFLVKPIR+NELKNLWQHVWR+CH +
Sbjct: 175 SMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWRRCHSSSDSGSESGTNTR---KFAKS 231
Query: 123 XXXXXXXXXXXXXXXXXXXXXGLNAKDGSDNGSGTQ 158
GL+ +DGSD GSGTQ
Sbjct: 232 RSICAFDNNTGSSDENDYGSRGLSVQDGSDKGSGTQ 267
>IMGA|Medtr7g146130.1 Response regulator receiver; CCT
chr07_pseudomolecule_IMGAG_V3 34887893-34891610 E
EGN_Mt090430 20090702
Length = 636
Score = 131 bits (329), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/96 (59%), Positives = 77/96 (80%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
V AV +GL+AW+ L++ + DLVLTEV +P +SG LL +IM+H CKNIP+IMMSS D
Sbjct: 40 VAAVRDGLKAWETLKNKSLDIDLVLTEVDLPSISGFSLLTQIMDHHNCKNIPLIMMSSQD 99
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
S++ VFK + GA+DFL+KP+R+NEL+NLWQHVWR+
Sbjct: 100 SVSTVFKFMLNGAVDFLIKPVRRNELRNLWQHVWRR 135
>IMGA|Medtr3g122660.1 Response regulator receiver
chr03_pseudomolecule_IMGAG_V3 30551992-30549295 E
EGN_Mt090430 20090702
Length = 414
Score = 130 bits (326), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 74/96 (77%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
V AV +GL+AW++L+ DL+LTEV +P +SG LL IM H CK+IPVIMMSS D
Sbjct: 82 VAAVADGLKAWEILKGRPRSIDLILTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQD 141
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
S++ V+KC+ +GA D+LVKPIR NEL+NLWQHVWR+
Sbjct: 142 SVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRR 177
>IMGA|Medtr3g122660.2 Response regulator receiver
chr03_pseudomolecule_IMGAG_V3 30551992-30549295 E
EGN_Mt090430 20090702
Length = 413
Score = 130 bits (326), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 74/96 (77%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
V AV +GL+AW++L+ DL+LTEV +P +SG LL IM H CK+IPVIMMSS D
Sbjct: 82 VAAVADGLKAWEILKGRPRSIDLILTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQD 141
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
S++ V+KC+ +GA D+LVKPIR NEL+NLWQHVWR+
Sbjct: 142 SVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRR 177
>IMGA|AC232874_6.1 Response regulator receiver AC232874.1
20706-21636 E EGN_Mt090430 20090702
Length = 176
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT + A +L++ + FDLV+ EV MP + G+ LL + ++PVIM+S+H
Sbjct: 38 VTTTSEAITALTMLQENIDMFDLVIAEVHMPDMDGLKLLELV---GLEMDLPVIMLSAHG 94
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
+V K +S GA DFL+KP+R EL+N+WQHV R
Sbjct: 95 ETELVMKAISHGARDFLLKPVRLEELRNIWQHVIR 129
>IMGA|Medtr8g146130.1 Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr08_pseudomolecule_IMGAG_V3
35671410-35667698 H EGN_Mt090430 20090702
Length = 633
Score = 80.1 bits (196), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT ++A +LL + + FDL++++V MP + G LL ++ ++P IM+S HD
Sbjct: 47 VTTTTKSVEALELLREKRSMFDLIISDVNMPEMDGFKLLEQVGLEM---DLPFIMLSGHD 103
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
V K + KGA D+LVKPIR ELKN+WQHV RK
Sbjct: 104 DRERVMKGVMKGACDYLVKPIRLEELKNIWQHVVRK 139
>IMGA|AC235748_5.1 Response regulator receiver; Myb-like DNA-binding
region, SHAQKYF class AC235748.1 17294-18890 E
EGN_Mt090430 20090702
Length = 222
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT + A +L++ + FDLV+ EV MP + G+ LL + ++PVIM+S+H
Sbjct: 38 VTTTSEAITALTMLQENIDMFDLVIAEVHMPDMDGLKLLELV---GLEMDLPVIMLSAHG 94
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
+V K +S GA DFL+KP+R EL+N+WQHV R
Sbjct: 95 ETELVMKAISHGARDFLLKPVRLEELRNIWQHVIR 129
>IMGA|Medtr8g146120.1 Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr08_pseudomolecule_IMGAG_V3
35666097-35662664 H EGN_Mt090430 20090702
Length = 596
Score = 77.0 bits (188), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT ++A +LL + + FDLV+++V MP + G LL ++ ++P IM+S +D
Sbjct: 47 VTTTTKPVEALELLREKRDMFDLVISDVSMPEMDGFKLLEQVGLEI---DLPFIMLSGND 103
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
V K + KGA D+LVKPIR ELKN+WQHV RK
Sbjct: 104 DRERVMKGVMKGACDYLVKPIRLEELKNIWQHVVRK 139
>IMGA|Medtr3g138060.1 Myb, DNA-binding; Response regulator receiver;
Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr03_pseudomolecule_IMGAG_V3
35178774-35183412 F EGN_Mt090430 20090702
Length = 645
Score = 76.3 bits (186), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT + A +L + + FDLV+++V MP + G LL + ++PVIM+S++
Sbjct: 38 VTTTSQAITALTMLRENKDKFDLVISDVHMPDMDGFKLLELV---GLEMDLPVIMLSAYG 94
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
+V K +S GA D+L+KP+R ELKN+WQHV RK
Sbjct: 95 DTKLVMKGISHGACDYLLKPVRLEELKNIWQHVIRK 130
>IMGA|Medtr8g146140.1 Response regulator receiver; Myb-like
DNA-binding region, SHAQKYF class
chr08_pseudomolecule_IMGAG_V3 35681662-35678501 E
EGN_Mt090430 20090702
Length = 549
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 4 TAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHDS 63
T ++A +LL + + FDLV+++V MP + G LL ++ ++P IM+S +D
Sbjct: 3 TTTTKPVEALELLREKKDMFDLVISDVSMPDMDGFKLLEQV---GLEMDLPFIMLSVNDD 59
Query: 64 MNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
+ V K + GA ++LVKPIR ELK++WQHV RK
Sbjct: 60 IEKVMKSVIHGACNYLVKPIRMEELKSIWQHVVRK 94
>IMGA|Medtr3g102990.1 Myb, DNA-binding; Response regulator receiver;
Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr03_pseudomolecule_IMGAG_V3
25254714-25258529 E EGN_Mt090430 20090702
Length = 570
Score = 69.7 bits (169), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 11 QAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK-NIPVIMMSSHDSMNIVFK 69
A LL + + +D+V+++V MP + G K++ H + ++PVIMMS + V K
Sbjct: 51 HALSLLRERKDGYDIVISDVNMPDMDGF----KLLEHVGLEMDLPVIMMSVDGETSRVMK 106
Query: 70 CLSKGALDFLVKPIRKNELKNLWQHVWRK 98
+ GA D+L+KPIR EL+N+WQHV+RK
Sbjct: 107 GVQHGACDYLLKPIRMKELRNIWQHVFRK 135
>IMGA|Medtr5g037580.1 Response regulator receiver
chr05_pseudomolecule_IMGAG_V3 15799825-15801298 E
EGN_Mt090430 20090702
Length = 237
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 13/109 (11%)
Query: 3 VTAVENGLQAWKLL----EDLTNH---------FDLVLTEVVMPCVSGIGLLCKIMNHKT 49
VTAV++G++A + L E T+ DLV+T+ MP ++G LL KI T
Sbjct: 42 VTAVDSGIRALQFLGLVDEKETSESDAFVPGLKVDLVITDYCMPGMTGYELLKKIKESTT 101
Query: 50 CKNIPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
+ IPV++MSS + + + +CL +GA DF+VKP++ +++K L ++ K
Sbjct: 102 FRAIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTK 150
>IMGA|Medtr8g124910.1 Response regulator receiver
chr08_pseudomolecule_IMGAG_V3 29028284-29026258 E
EGN_Mt090430 20090702
Length = 214
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 9/104 (8%)
Query: 3 VTAVENGLQAWKLL----EDLTNHFD-----LVLTEVVMPCVSGIGLLCKIMNHKTCKNI 53
VT VE+ +A + L E+ FD L++T+ MP ++G LL KI + I
Sbjct: 52 VTVVESARRALQFLGLDGENSDVAFDAVKVNLIMTDYSMPGMTGYELLKKIKESSVFREI 111
Query: 54 PVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
PV++MSS + + + +CL +GA DFL+KP++ ++++ L + R
Sbjct: 112 PVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMR 155
>IMGA|AC235748_7.1 Response regulator receiver; Myb-like DNA-binding
region, SHAQKYF class; Homeodomain-like AC235748.1
22692-24448 E EGN_Mt090430 20090702
Length = 234
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT A +L + + FDLV+ +V +P + G+ LL + ++PV++M S
Sbjct: 38 VTTTSQAKTALTMLRENKDKFDLVIADVHLPDMDGLKLLELVE---LETDLPVVVMLSES 94
Query: 63 SMN-IVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
S N +V K + GA DFLVKP+R ELK +WQHV RK
Sbjct: 95 SDNELVMKAVFHGASDFLVKPVRLQELKTIWQHVIRK 131
>IMGA|Medtr8g039500.1 Response regulator receiver
chr08_pseudomolecule_IMGAG_V3 8290123-8291589 F
EGN_Mt090430 20090702
Length = 177
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 17/112 (15%)
Query: 3 VTAVENGLQAWKLL---EDLTNHFD--------------LVLTEVVMPCVSGIGLLCKIM 45
VT V++ +A K L ED +D L++T+ MP ++G LL KI
Sbjct: 35 VTTVDSASKALKFLGLVEDEMRTYDTHVASEINQDVDVNLIITDYCMPGMTGYDLLRKIK 94
Query: 46 NHKTCKNIPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
K+ K+IPV++MSS + + + +CL +GA +F +KP++ +++ L H+ +
Sbjct: 95 ESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVSKLKPHLLK 146
>IMGA|Medtr4g142310.1 Response regulator receiver
chr04_pseudomolecule_IMGAG_V3 35371948-35373057 H
EGN_Mt090430 20090702
Length = 265
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK-NIPVIMMSSH 61
VT A+KLL + D+VL E MP + + H T + NI VIMM
Sbjct: 44 VTTCSKASFAFKLLTETKGCVDVVLIEAQMPDMDSYDFV----RHVTQQINISVIMMCDD 99
Query: 62 DSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
S N V K ++ GA +F +KP +N++KN+WQ V RK
Sbjct: 100 GSTNAVMKAVTNGACEFWIKPFIENQIKNMWQCVARK 136
>IMGA|Medtr4g142200.1 Response regulator receiver
chr04_pseudomolecule_IMGAG_V3 35298034-35299143 H
EGN_Mt090430 20090702
Length = 265
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK-NIPVIMMSSH 61
VT A+KLL + D+VL E MP + + H T + NI VIMM
Sbjct: 44 VTTCSKASFAFKLLTETKGCVDVVLIEAQMPDMDSYDFV----RHVTQQINISVIMMCDD 99
Query: 62 DSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
S N V K ++ GA +F +KP +N++KN+WQ V RK
Sbjct: 100 GSTNAVMKAVTNGACEFWIKPFIENQIKNMWQCVARK 136
>IMGA|Medtr5g014220.1 Myb, DNA-binding; Response regulator receiver;
Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr05_pseudomolecule_IMGAG_V3
4502320-4508391 E EGN_Mt090430 20090702
Length = 548
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
V+ N +A + F + + EV + C G G K + + K++P IM S+
Sbjct: 44 VSTFYNENEALSAISSSPKCFHVAIVEVSISCPDG-GF--KFL--ENAKDLPTIMTSNSQ 98
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKC 99
+N + KC++ GA++FL KP+ +++LKN+WQHV K
Sbjct: 99 CINTMMKCIALGAVEFLTKPLSEDKLKNIWQHVVHKA 135
>IMGA|Medtr5g014220.2 Myb, DNA-binding; Response regulator receiver;
Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr05_pseudomolecule_IMGAG_V3
4502320-4508391 E EGN_Mt090430 20090702
Length = 543
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
V+ N +A + F + + EV + C G G K + + K++P IM S+
Sbjct: 44 VSTFYNENEALSAISSSPKCFHVAIVEVSISCPDG-GF--KFL--ENAKDLPTIMTSNSQ 98
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKC 99
+N + KC++ GA++FL KP+ +++LKN+WQHV K
Sbjct: 99 CINTMMKCIALGAVEFLTKPLSEDKLKNIWQHVVHKA 135
>IMGA|Medtr4g156880.1 Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr04_pseudomolecule_IMGAG_V3
38956664-38953063 E EGN_Mt090430 20090702
Length = 734
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 22 HFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIM-MSSHDSMNIVFKCLSKGALDFLV 80
HFDLVL E MP + L ++ +IPVIM M S S + + GA D V
Sbjct: 57 HFDLVLLETQMPDMDSFDFLQQLTQQI---DIPVIMTMCSEGSTTGILNAIENGACDCWV 113
Query: 81 KPIRKNELKNLWQHVWRK 98
KP +N++K +W H RK
Sbjct: 114 KPFSENQVKYMWHHAVRK 131
>IMGA|Medtr3g019360.1 Response regulator receiver
chr03_pseudomolecule_IMGAG_V3 3899380-3901298 E
EGN_Mt090430 20090702
Length = 164
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 21/113 (18%)
Query: 3 VTAVENGLQAWKLL------------------EDLTNHFDLVLTEVVMPCVSGIGLLCKI 44
VT V++G +A K L D +L++T+ MP ++G LL KI
Sbjct: 30 VTVVDSGTKALKFLGLVEDEVRNEKPHSIAAETDQVVEVNLIITDYCMPGMTGYDLLRKI 89
Query: 45 MNHKTCKNIPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
+ K+IPV++MSS N+ +GA +F +KP++++++ L H+ +
Sbjct: 90 KESNSLKDIPVVIMSSE---NVHQGLTEEGAEEFFLKPVQQSDVNKLKPHLLK 139
>IMGA|Medtr4g025080.1 Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr04_pseudomolecule_IMGAG_V3
5908624-5911978 H EGN_Mt090430 20090702
Length = 230
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 23 FDLVLTEVVMPCVSGIGLLCKIMNHKTCK-NIPVIMMSSHDSMNIVFKCLSKGALDFLVK 81
FD++L + MP + C + H + + IP IMM+ + N + K + GA ++ K
Sbjct: 23 FDVMLIDARMPNMDA----CDFVQHVSLQLQIPAIMMAVDSTKNSIMKSIECGACEYWTK 78
Query: 82 PIRKNELKNLWQHVWRK 98
P+ + + K +WQHV RK
Sbjct: 79 PLIEKKFKTMWQHVARK 95
>IMGA|Medtr7g027130.1 Myb, DNA-binding; Response regulator
receiver; Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr07_pseudomolecule_IMGAG_V3
7085204-7081559 H EGN_Mt090430 20090702
Length = 595
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 23 FDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHDSMNIVFKCLSKGALDFLVKP 82
FDLV+TE + ++G+ I K IP+IMMS + +++ K L GA ++VKP
Sbjct: 30 FDLVITEFHLVGMNGLEFQKHI---KDQFQIPIIMMSEDNRPSLISKTLENGAAQYIVKP 86
Query: 83 IRKNELKNLWQHV 95
+ K++W++V
Sbjct: 87 FCAEDFKDIWKYV 99
>IMGA|AC232874_22.1 Response regulator receiver; Myb-like
DNA-binding region, SHAQKYF class; Homeodomain-like
AC232874.1 68409-70164 E EGN_Mt090430 20090702
Length = 228
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT A +L + + FDLV+ +V +P + G+ LL + ++PV++ D
Sbjct: 38 VTTTSQAKTALTMLRENKDKFDLVIADVHLPDMDGLKLLELVE---LETDLPVVVSKWGD 94
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
C LDFLVKP+R ELK +WQHV RK
Sbjct: 95 LF-----CSFPWCLDFLVKPVRLQELKTIWQHVIRK 125