Jatropha Genome Database

JcCA0152521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152521.10 - phase: 0 
         (212 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g036830.1 Ribose 5-phosphate isomerase chr02_pseudomo...   298   2e-81
IMGA|Medtr2g036830.2 Ribose 5-phosphate isomerase chr02_pseudomo...   134   4e-32
IMGA|Medtr1g137480.1 Ribose 5-phosphate isomerase chr01_pseudomo...    87   5e-18
IMGA|Medtr7g140770.1 Ribose 5-phosphate isomerase chr07_pseudomo...    74   6e-14

>IMGA|Medtr2g036830.1 Ribose 5-phosphate isomerase
           chr02_pseudomolecule_IMGAG_V3 9882668-9886939 E
           EGN_Mt090430 20090702
          Length = 250

 Score =  298 bits (762), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/208 (72%), Positives = 166/208 (79%), Gaps = 8/208 (3%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           MV+GLGSG+ASGMAIQ+LGRQLR G LKD+VGIP SV          IPLD YQD SQID
Sbjct: 30  MVVGLGSGHASGMAIQHLGRQLRNGNLKDVVGIPTSVASASEAAKAGIPLDTYQDSSQID 89

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSILNAANKHVFIIPEKQYKGVIDGSIP 120
            AFDDAD +EE T +A+IGRRK Q EESIIQEK++        FII E QYKG ++GSIP
Sbjct: 90  IAFDDADGVEEGTFVAIIGRRKLQSEESIIQEKAM--------FIIEENQYKGGLEGSIP 141

Query: 121 VLVQSLNWMEAAEEIDDLFLGDAEVWRRPSIGDAGPLGGDFPLVTREGHNVLDVIFTSPI 180
           VL+QSLNW+ AAEEIDD+FLGDAEVWRRP+IG AGPLGGDFPLVT EGHNVLDVIFTSPI
Sbjct: 142 VLIQSLNWLAAAEEIDDMFLGDAEVWRRPAIGQAGPLGGDFPLVTGEGHNVLDVIFTSPI 201

Query: 181 QSLAEVAKSLDKVAGVVDHGIISKFPLV 208
            SLAEVAK LD V GVVDHG+ISK P  
Sbjct: 202 PSLAEVAKILDNVDGVVDHGVISKTPCT 229


>IMGA|Medtr2g036830.2 Ribose 5-phosphate isomerase
           chr02_pseudomolecule_IMGAG_V3 9882668-9885129 E
           EGN_Mt090430 20090702
          Length = 127

 Score =  134 bits (336), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/95 (69%), Positives = 74/95 (77%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           MV+GLGSG+ASGMAIQ+LGRQLR G LKD+VGIP SV          IPLD YQD SQID
Sbjct: 30  MVVGLGSGHASGMAIQHLGRQLRNGNLKDVVGIPTSVASASEAAKAGIPLDTYQDSSQID 89

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSI 95
            AFDDAD +EE T +A+IGRRK Q EESIIQEK+I
Sbjct: 90  IAFDDADGVEEGTFVAIIGRRKLQSEESIIQEKAI 124


>IMGA|Medtr1g137480.1 Ribose 5-phosphate isomerase
           chr01_pseudomolecule_IMGAG_V3 30487780-30484981 E
           EGN_Mt090430 20090702
          Length = 268

 Score = 87.0 bits (214), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 14/204 (6%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           MV+GLG+G+ +  A+  +G  +R G LK+I+GIP S           IPL        ID
Sbjct: 55  MVLGLGTGSTAKHAVARIGELIRQGKLKNIIGIPTSTITHEQAVSLGIPLSDLDSHPVID 114

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSILNAANKHVFIIPEKQYKGVIDGS-- 118
            A D AD + +  L  V GR       S+++EK +  A  K V I+ E +    + GS  
Sbjct: 115 LAIDGADEV-DPYLNLVKGRGG-----SLLREKMVEGACKKFVCIVDESKLVNYLGGSGL 168

Query: 119 -IPVLVQSLNWMEAAEEIDDLFLGDAEVWRRPSIGDAGPLGGDFPLVTREGHNVLDVIFT 177
            +PV V    W   A  + +LF     V +  + G+ G      P VT  G+ ++D+ F 
Sbjct: 169 AMPVEVIRFCWKFTAGRLQNLFEESGCVAKLRTSGEKGE-----PYVTDNGNYIVDLYFK 223

Query: 178 SPIQSLAEVAKSLDKVAGVVDHGI 201
             I  L   + ++  +AGVV+HG+
Sbjct: 224 KSIGDLRVASDAILNIAGVVEHGM 247


>IMGA|Medtr7g140770.1 Ribose 5-phosphate isomerase
           chr07_pseudomolecule_IMGAG_V3 33954296-33953176 E
           EGN_Mt090430 20090702
          Length = 280

 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 15/205 (7%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           MV+GLG+G+ +   +  LG  L +G L +I+G+P S           IPL    D  ++D
Sbjct: 68  MVLGLGTGSTAAFVVSKLGELLNSGELTNIIGVPTSKRTEEQARSLGIPLSVLDDNPRLD 127

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSILNAANKHVFIIPEKQYKGVIDGS-- 118
            A D AD  E +  + ++  R      ++++EK +  A++K V ++ + +    + GS  
Sbjct: 128 LAIDGAD--EVDPFLNLVKGRGG----ALLREKMVEAASDKFVVVVDDTKLVSGLGGSGL 181

Query: 119 -IPVLVQSLNWMEAAEEIDDLFLGDAEVWRRPSIGDAGPLGGDFPLVTREGHNVLDVIFT 177
            +PV V    W      + +LF  +  V  +  + ++G      P VT   + ++D+ F 
Sbjct: 182 AMPVEVVQFCWKYNLIRLQELFKEEG-VDAKLRVDESGK-----PYVTDNSNYIVDLYFK 235

Query: 178 SPIQSLAEVAKSLDKVAGVVDHGII 202
           +PI+        +  + GVV+HG+ 
Sbjct: 236 TPIRDANAAGAEISSLEGVVEHGLF 260