Jatropha Genome Database

JcCA0151501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151501.10 + phase: 0 
         (265 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g108160.1 Carbonic anhydrase, eukaryotic chr07_pseudo...   160   6e-40

>IMGA|Medtr7g108160.1 Carbonic anhydrase, eukaryotic
           chr07_pseudomolecule_IMGAG_V3 25409160-25410839 E
           EGN_Mt090430 20090702
          Length = 270

 Score =  160 bits (405), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 132/230 (57%), Gaps = 9/230 (3%)

Query: 34  TNGPEKWGSLRPTYSQCSKGKSQSPINIIKNDSVADGDLKPLIRDYKXXXXXXXXXXXXX 93
           + GPE WG+L+P +  C  GK QSPI+I+         L  L +DYK             
Sbjct: 40  SKGPENWGNLKPEWKLCGNGKLQSPIDILNKRVQELPQLGKLEKDYKLGPAFLKNRFND- 98

Query: 94  GINFERSGAAGQLSLDGKNYQLANMHWHSPSEHQINEFSYPLELHLVHQAADGALSVVAI 153
            +  +  G AG+L+L+G  Y+L   HWH+PSEH +N   + +E H VHQ +   ++V+ I
Sbjct: 99  -VMLQWKGYAGKLNLNGTYYKLIQCHWHTPSEHTLNGSKFDMEQHCVHQNSKDEIAVIGI 157

Query: 154 LYEDGPEDPFTAKIQDGLTKLAQAGNSSKGVPIGLLD-IEPLKEKASEYFTYTGSLTTPP 212
            Y+ G  DP  +K+ + +  +       K + +G+++  +  K   ++Y+ Y GSLT+PP
Sbjct: 158 WYKIGRPDPLLSKLLNHIKSI-----RDKEIDVGIINPADIFKFGGTKYYRYIGSLTSPP 212

Query: 213 CSENVLWNVLAKVATVSKAQVEALKAPLGEAYKQNSRPIQPLNDRKVSLY 262
           C+E+V+W VL KV TVS  Q++ALKA +   +++N+RP Q L+ RKV  Y
Sbjct: 213 CTEDVIWTVLKKVKTVSVEQLKALKA-VNHGFEENARPTQDLDGRKVWFY 261