Jatropha Genome Database

JcCA0151191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151191.10 - phase: 0 
         (551 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g026200.1 nitroreductase family protein, putative chr...   684   0.0  
IMGA|Medtr4g025910.1 nitroreductase, putative chr04_pseudomolecu...   291   7e-79

>IMGA|Medtr4g026200.1 nitroreductase family protein, putative
           chr04_pseudomolecule_IMGAG_V3 6371918-6368083 H
           EGN_Mt090430 20090702
          Length = 633

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/471 (67%), Positives = 371/471 (78%), Gaps = 6/471 (1%)

Query: 69  KLSQVIKYHNQTKHNFTNYARGPRGLDWANQPNPFRRYISAPLLSLQHFPTDNQTASSAA 128
           KL+ V+KYHNQTKHNF NYARGP GLDWANQPNPFRR++++PL+ L HF    +  S   
Sbjct: 75  KLTHVLKYHNQTKHNFNNYARGPHGLDWANQPNPFRRFLNSPLIPLPHFTPQQEQQS--- 131

Query: 129 DSAPLYHSIFNSLXXXXXXXXXXXXQLFYDSLALSAWKTTGFSTWSLRVNPSSGNLHPTE 188
              P Y S+FNSL               Y SLALSAWK+T FSTWSLRVNPSSGNLHPTE
Sbjct: 132 ---PFYPSLFNSLPSPKPISKSTISHFLYHSLALSAWKSTSFSTWSLRVNPSSGNLHPTE 188

Query: 189 AYLIAPPIESLSSSSFVAHYAPKEHALELRATIPSDFFPKFFPRDSFLIGISSIFWREAW 248
           AY+IAP IESLS S FVAHYAPKEH+LELRA IPS FF KFFP +SFL+G SSIFWRE+W
Sbjct: 189 AYIIAPSIESLSDSPFVAHYAPKEHSLELRAKIPSGFFDKFFPPNSFLVGFSSIFWRESW 248

Query: 249 KYGERAFRYCNHDVGHXXXXXXXXXXGLGWDVKLLDGLGHKELERLMGLEIYQSFQVPDG 308
           KYGER FRYCNHDVGH           LGWDVKLLD LG +EL+ LMGL+++  F+ P  
Sbjct: 249 KYGERGFRYCNHDVGHAIGAISMAAASLGWDVKLLDSLGCEELKFLMGLDVFPEFETPTR 308

Query: 309 PIKGKIPDIEFEHSDCLLLVFPKGATDFDVNYKELSSALMEFKNLDWKGKPNLLSKEHVC 368
            +KGKIP+IEFEH DC++LVFP G T FD++Y ELS+A++EF  LDW GKPN LSKEHVC
Sbjct: 309 AVKGKIPEIEFEHPDCVMLVFPSGVTGFDLDYTELSNAILEFSKLDWIGKPNSLSKEHVC 368

Query: 369 WDIIYRTAEAVKKPLTLGERFLIDPFQGSGVCSDGSYKGFTVREIVRKRRSAVDMDGVTK 428
           WDIIYRT+E VKKPLTLG+R ++DPFQ SG+ S+  YKG TV E+VRKRRSAVDMDGVT 
Sbjct: 369 WDIIYRTSEIVKKPLTLGDRLVVDPFQSSGIISESVYKGLTVSEVVRKRRSAVDMDGVTT 428

Query: 429 IDRETFYQILLHCVPSGSGTGESQKRQLALPFRVLSWDAEVHAALFVHRVTGLPKGLYFL 488
           ++RETFYQ+L HC+PSG   G+ Q++QL+LPFR L WDAEVHAALFVHRV GLP+GLYFL
Sbjct: 429 MERETFYQVLSHCLPSGCEAGKKQRKQLSLPFRALPWDAEVHAALFVHRVEGLPQGLYFL 488

Query: 489 VRNEDHFHELKKATRAGFKWEKPEGCPDDLPLYELARGDCQQIAKQLSCHQ 539
           VRN+DH+ ELKKA    F W KPEGCPDDLPLYEL R DC+++AKQLSCHQ
Sbjct: 489 VRNDDHYGELKKAMNPDFVWTKPEGCPDDLPLYELLRSDCRRLAKQLSCHQ 539


>IMGA|Medtr4g025910.1 nitroreductase, putative
           chr04_pseudomolecule_IMGAG_V3 6264750-6265937 E
           EGN_Mt090430 20090702
          Length = 395

 Score =  291 bits (744), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 141/212 (66%), Positives = 156/212 (73%), Gaps = 6/212 (2%)

Query: 69  KLSQVIKYHNQTKHNFTNYARGPRGLDWANQPNPFRRYISAPLLSLQHFPTDNQTASSAA 128
           KL+ V+KYHNQTKHNF NYARGP GLDWANQPNPFRR++++PL+ L HF    +  S   
Sbjct: 75  KLTHVLKYHNQTKHNFNNYARGPHGLDWANQPNPFRRFLNSPLIPLPHFTPQQEQQS--- 131

Query: 129 DSAPLYHSIFNSLXXXXXXXXXXXXQLFYDSLALSAWKTTGFSTWSLRVNPSSGNLHPTE 188
              P Y S+FNSL               Y SLALSAWK+T FSTWSLRVNPSSGNLHPTE
Sbjct: 132 ---PFYPSLFNSLPSPKPISKSTISHFLYHSLALSAWKSTSFSTWSLRVNPSSGNLHPTE 188

Query: 189 AYLIAPPIESLSSSSFVAHYAPKEHALELRATIPSDFFPKFFPRDSFLIGISSIFWREAW 248
           AY+IAP IESLS S FVAHYAPKEH+LELRA IPS FF KFFP +SFL+G SSIFWRE+W
Sbjct: 189 AYIIAPSIESLSDSPFVAHYAPKEHSLELRAKIPSGFFDKFFPPNSFLVGFSSIFWRESW 248

Query: 249 KYGERAFRYCNHDVGHXXXXXXXXXXGLGWDV 280
           KYGER FRYCNHDVGH           LGWDV
Sbjct: 249 KYGERGFRYCNHDVGHAIGAISMAAASLGWDV 280