Jatropha Genome Database

JcCA0151141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151141.10 - phase: 0 /partial
         (521 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g023640.1 ATGRIP/GRIP; protein binding, putative chr0...   492   e-139
IMGA|Medtr5g023650.1 GRIP chr05_pseudomolecule_IMGAG_V3 9317987-...    79   7e-15

>IMGA|Medtr5g023640.1 ATGRIP/GRIP; protein binding, putative
           chr05_pseudomolecule_IMGAG_V3 9311658-9316852 E
           EGN_Mt090430 20090702
          Length = 589

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 276/449 (61%), Positives = 332/449 (73%), Gaps = 7/449 (1%)

Query: 4   GEGNVGETTETQTEDSPLDPEKQLSDI------PHGKNENLVKENGLHDGIPLVENTQEQ 57
           G  + G   E   +DS   PE+ LSD         G N NLV +N   DG     +T ++
Sbjct: 121 GLADTGRMMEIHAQDSS-KPEEHLSDSDMNQQSKDGSNTNLVLDNRFSDGNEGSADTHDE 179

Query: 58  LVQMVIELKFQNEFLKSQFEGLKNNQSASEESQQRTEVSDQKTVGSTDVXXXXXXXXXXX 117
           L+QMV++LK QNEFLKSQ EG  N +S S ES  + EV   +   S  V           
Sbjct: 180 LLQMVVDLKSQNEFLKSQIEGFSNVESVSRESSMQKEVGGTEDGESDIVKELRERIELLN 239

Query: 118 XXXXXXKQTRGAAEVALNHLREAYSEADAKAQELLTKLTEAQQKLDQEIKEREEKYSELD 177
                 KQTR A+E AL HL+ AYS+A+AKA++L  +L EAQ KL+ EIKER+EKYSELD
Sbjct: 240 KEFLIEKQTRIASEEALKHLQIAYSDAEAKAKDLSEQLVEAQNKLEHEIKERDEKYSELD 299

Query: 178 SKFQRLHKRAKQRIQEVQKEKDDLEARFRDVNETAERASSQHSALQQELERTRQQANDAL 237
           +K  RLHKRAKQRIQEVQKEKDDLEARF ++NE+AERASSQ SALQQELERTR+QAN+AL
Sbjct: 300 AKLNRLHKRAKQRIQEVQKEKDDLEARFSELNESAERASSQQSALQQELERTRKQANEAL 359

Query: 238 RAMDAERQQLRSANNKLRDNIEELRRSFQPKENALEALQQTLLEKEQMLEDMRGLLQSAE 297
           +AMD +RQQLRSANNKLRD IE+LRRS QPKE ALE+LQ +L EKEQMLEDMRGLL++AE
Sbjct: 360 KAMDGDRQQLRSANNKLRDTIEDLRRSLQPKEEALESLQLSLAEKEQMLEDMRGLLRTAE 419

Query: 298 EKRQASIAELSAKHQKNIENLEGQLNDALADRTKATETISSLQVLIAEKESEIAEMDAAS 357
           EKRQA++AELSAKHQKN+E+LE QLNDA++DR KA E+ISSLQVL+AEKES+IAEM+AAS
Sbjct: 420 EKRQAALAELSAKHQKNMESLEAQLNDAVSDRRKAAESISSLQVLVAEKESKIAEMEAAS 479

Query: 358 SGEVARLRAALESVKGXXXXXXXXXXXXXXXXXXXSQGLKMKLEIAESNCIRAEIEAAKM 417
           +GE ARLRAA+ESVKG                   SQ LK KL+IAESNCIRAE+E AK+
Sbjct: 480 TGEAARLRAAMESVKGEISHVKQEHEKERESWEAASQALKAKLQIAESNCIRAEVEVAKI 539

Query: 418 RSQLESEVSVQRQMLNKKDAELLAAKEEI 446
           RSQLESEVS Q ++L+ +D+ELLAAKEE+
Sbjct: 540 RSQLESEVSAQAKILSMRDSELLAAKEEV 568


>IMGA|Medtr5g023650.1 GRIP chr05_pseudomolecule_IMGAG_V3
           9317987-9321640 E EGN_Mt090430 20090702
          Length = 398

 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 56/82 (68%)

Query: 440 LAAKEEINRLETEFSSYKVRAHALLQRKDSELAAAMDSEQLRXXXXXXXXXXXXXSIISA 499
           ++ K  I+ LE EFSSYK RAHALLQ+KD++L AA DSEQL+               I+ 
Sbjct: 38  ISKKYLISSLEREFSSYKARAHALLQKKDADLIAAKDSEQLKALEEALKEAENEVLSITE 97

Query: 500 ERDKALQDLQDALAHRDKELAE 521
           ERD+ALQDLQ A+A+ +KELAE
Sbjct: 98  ERDRALQDLQSAMANNEKELAE 119