Jatropha Genome Database

JcCA0151101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151101.10 - phase: 0 
         (651 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g144730.1 hypothetical protein chr04_pseudomolecule_I...   483   e-136
IMGA|Medtr4g144720.1 hypothetical protein chr04_pseudomolecule_I...   187   1e-47
IMGA|Medtr4g079910.1 hypothetical protein chr04_pseudomolecule_I...   157   2e-38

>IMGA|Medtr4g144730.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 36517424-36511447 E
           EGN_Mt090430 20090702
          Length = 478

 Score =  483 bits (1242), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/460 (55%), Positives = 322/460 (70%), Gaps = 11/460 (2%)

Query: 1   MAVLCFVLDLCSLSPPLLRDLKQ----LANLYAIXXXXXXXXXXXXLRDRIGLCYVSNNR 56
           M  LCFVLDL +L+PPLL DLKQ    LAN YAI            L D+IGLCYV  NR
Sbjct: 1   MVQLCFVLDLRTLAPPLLGDLKQSLLQLANFYAISNSSLSSRKSDTLSDKIGLCYVVKNR 60

Query: 57  ISSSHELKIAYSPRGNFNLRDFHHAVNNLPGDAFLPEIDD-SGALLSSDVKLPSVLSDQV 115
           +SSS EL IAY P GNFNLRDFHHAVNNLP DAFLP+ID  SGA    DV +  VLS++V
Sbjct: 61  LSSSDELMIAYRPVGNFNLRDFHHAVNNLPSDAFLPDIDTVSGA----DVMISDVLSERV 116

Query: 116 LYSWGGKDFMRKVIVLSSCLTEKIDSDMKGILADAADKCVSVEFVLFEQSASYLSNVQEN 175
           LYSW GKD  RKVIV++S L E ++  M+  L DAAD+CVSV+F +F+  +S+L + +EN
Sbjct: 117 LYSWQGKDIERKVIVITSILPEDVNFVMQKSLTDAADRCVSVDFAVFQPKSSHLIDSREN 176

Query: 176 INCFATSLSDLDNCSFQTYLPDTRVFHSLVKRWLQDLKDDMEEPLQARFIFKSNLVGSLN 235
           IN F  S+S LDNCS QTY+ D R F+ LVKRWLQ LKDDM++PL AR IFK +L+ S+N
Sbjct: 177 INNFRRSISHLDNCSVQTYITDFRSFNGLVKRWLQVLKDDMDKPLLARLIFKDDLLDSVN 236

Query: 236 QISCSLSISVSQIIDGFSACQTCRCHGIVLDNAVKDKADRPSCPVTGNDLGTANVIDNSV 295
            I C+L   V+ I +  S CQTCRCHGI LD+A K K +  SC VTG++L T +V +NSV
Sbjct: 237 HIFCNLLPPVNPITNSISQCQTCRCHGIPLDDAGK-KLNMFSCSVTGSNLETCDVNENSV 295

Query: 296 KVGDKTILFMPSFQSSMKLHQVSSPIDFNVIERTNLSSLSEGVMFGTSHYVAPSACNEIE 355
            +G KTILF+PSF +S+KL  + SPI+  V ER NL+SL EG++ G S  V PS  + IE
Sbjct: 296 CLGGKTILFLPSFHNSLKLLPIYSPINVTVTERINLASLDEGLIMGASFVVTPSPYHVIE 355

Query: 356 TSSDEMFKPELNFQLFQGICSALHSMDQGLICSSYCNVETMRETAFHCYYILQPSENGPM 415
           T+SD+  + ++N QLFQG+ S LHSMDQGLICSS C++ETM E  +HCYYILQPS+NGPM
Sbjct: 356 TNSDDTDQSDMNAQLFQGLSSILHSMDQGLICSSNCDLETMTEAPYHCYYILQPSDNGPM 415

Query: 416 XXXXXXXXXXVLPRPDINPFIHSSVSKDIQNAIHESVLKI 455
                     V   PD  P I  SV+KD++N++   +LK+
Sbjct: 416 LMRRIAGAEEVKQSPDY-PLIDPSVNKDVENSVQACLLKV 454


>IMGA|Medtr4g144720.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 36511027-36509246 H
           EGN_Mt090430 20090702
          Length = 268

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/200 (51%), Positives = 138/200 (69%), Gaps = 2/200 (1%)

Query: 454 KIELRDYNPVLHERGFHQKLNLLVKESLQFGSIPPKQNEA-SELNSKQPNSSELNIKPNR 512
           KI+L DY+P+LHERGFHQKLN+LVKESL+ GS+ PK + A SEL+S +  SSE+  +   
Sbjct: 69  KIDLTDYDPLLHERGFHQKLNVLVKESLKLGSVFPKMDGAFSELSSTRQPSSEVIGRAES 128

Query: 513 ILDTIVVEDEPSLLNRTVKEDKTTS-IAEEWEQLVVSEDPSIYSPACTSKPKIDILVLSS 571
             + I V++    ++ T ++D+T + I EEW+QLVVSE+P +YSP+C  K K+D   +S 
Sbjct: 129 ATNVIGVDEGTLSMDITDQDDRTMAYITEEWKQLVVSEEPKLYSPSCIPKAKLDQSSISP 188

Query: 572 PDSNKQLDVKTSKILERLEVPRQLKTKITSPILTGSSLSETGMPTKRPLIPFQHTHATEQ 631
            +  +QLD +TS+ILERLEVPR  K K  SP+   S +    +PTK+PLIPF  T  TEQ
Sbjct: 189 RNGIRQLDKETSRILERLEVPRPSKGKKASPVSNESCMKNIAVPTKKPLIPFLPTQNTEQ 248

Query: 632 SWSSSQLMKPNFQRAKRKHK 651
               SQLMKPNFQR KRK +
Sbjct: 249 VIVGSQLMKPNFQRQKRKQR 268


>IMGA|Medtr4g079910.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 16237771-16235290 E
           EGN_Mt090430 20090702
          Length = 813

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/186 (47%), Positives = 121/186 (65%), Gaps = 5/186 (2%)

Query: 218 EPLQARFIFKSNL----VGSLNQISCSLSISVSQIIDGFSACQTCRCHGIVLDNAVKDKA 273
           EP     I  +N+    V  +N I C+L   V+ I + FS CQT  CHGI LD+A K K 
Sbjct: 609 EPEPGYLIAFTNIKPKRVDFVNHIFCNLLPPVNLITNSFSQCQTFSCHGIPLDDAGK-KL 667

Query: 274 DRPSCPVTGNDLGTANVIDNSVKVGDKTILFMPSFQSSMKLHQVSSPIDFNVIERTNLSS 333
           +  SCPVTG+++ T +V +N V VG KTILF+PSF + +KL  + SPI+  V +R NL+S
Sbjct: 668 NPFSCPVTGSNMETCDVYENYVCVGGKTILFLPSFHNLLKLLPIYSPINITVTKRINLAS 727

Query: 334 LSEGVMFGTSHYVAPSACNEIETSSDEMFKPELNFQLFQGICSALHSMDQGLICSSYCNV 393
           L EGV+ G S  V P   + IET+ D+  + +++ QLFQG+ S LHSMDQGL+CSS C++
Sbjct: 728 LDEGVIMGVSFVVTPFPYHVIETNFDDTDQSDMHAQLFQGLSSVLHSMDQGLMCSSSCDL 787

Query: 394 ETMRET 399
           ET+ E 
Sbjct: 788 ETVTEA 793