Jatropha Genome Database
- JcCA0150461.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0150461.10 - phase: 0
(498 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g086860.1 Glutamate decarboxylase; chr03_pseudomolecu... 779 0.0
IMGA|Medtr5g084950.1 Glutamate decarboxylase; chr05_pseudomolecu... 556 e-158
IMGA|Medtr5g084960.1 Glutamate decarboxylase chr05_pseudomolecul... 174 1e-43
IMGA|Medtr7g022250.1 Pyridoxal-dependent decarboxylase; chr07_ps... 94 2e-19
IMGA|Medtr5g083650.1 Pyridoxal-dependent decarboxylase; Thioredo... 70 2e-12
IMGA|Medtr5g083680.1 Glutamate decarboxylase 2, putative chr05_p... 65 5e-11
IMGA|Medtr5g083620.1 Glutamate decarboxylase chr05_pseudomolecul... 59 5e-09
IMGA|Medtr2g008250.1 Pyridoxal-dependent decarboxylase; chr02_ps... 50 2e-06
>IMGA|Medtr3g086860.1 Glutamate decarboxylase;
chr03_pseudomolecule_IMGAG_V3 20503200-20508077 F
EGN_Mt090430 20090702
Length = 508
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/508 (72%), Positives = 425/508 (83%), Gaps = 10/508 (1%)
Query: 1 MVITTTIVDSDELLHSTFASRYVRAPVPRFKIAEKSMPKEAAYQVINDELMLDGNPRLNL 60
MV++ T +SD +HSTFASRYVR +PRFK+ E+S+PK+AAYQ+INDELMLDGNPRLNL
Sbjct: 1 MVLSKTASESDVSVHSTFASRYVRTSLPRFKMPEESIPKDAAYQIINDELMLDGNPRLNL 60
Query: 61 ASFVTTWMEPECNDLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPAGEDETAVG 120
ASFVTTWMEPEC+ LIMASINKNYVDMDEYPVTTELQNRCVNMIAHLF+AP E+E AVG
Sbjct: 61 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEENEAAVG 120
Query: 121 VGTVGSSEAIMLSGLAFKRKWQNKRKAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
VGTVGSSEAIML+GLAFKRKWQNKRK +GKPYDKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKQEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 181 VKLTEGNYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVXXXXXXXXXXXXXTGWDTP 240
VKL+EG YVMDP KAVE+VDENTICVAAILGSTL GEFEDV TGWDTP
Sbjct: 181 VKLSEGYYVMDPAKAVELVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTP 240
Query: 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKEDLPEEL 300
IHVDAASGGFIAPF+YP+LEWDFRLPLVKSINVSGHKYGLVYAG+GWA+WR+KEDLPEEL
Sbjct: 241 IHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWAIWRSKEDLPEEL 300
Query: 301 IFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKKIIENCMENTMLLKKGIEK 360
IFHINYLG+DQPTFTLNFSKGSSQ+IAQYYQ IRLG+EGYK ++ENC +N ++LK+G+EK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMIVLKEGLEK 360
Query: 361 TDRFDIVSKDIGVPLVAFSLKDSSKYTVFEVSENLRRFGWIIPAYTMPADAEHIAVLRVV 420
RF+IVSKD GVPLVAF+LKD + F++S+ LRRFGWI+PAY+MP DA+HI VLRVV
Sbjct: 361 MGRFNIVSKDDGVPLVAFTLKDPHNFDEFQISDLLRRFGWIVPAYSMPPDAQHITVLRVV 420
Query: 421 VREDLSRSLAERLVSHIGQVLKEMDLLPVHI----SSQTAIVNKTLQDSEGKKIVKKSER 476
+RED SR+LAERLV+ I +VL E+D L I + + V++ ++D+ + KKS
Sbjct: 421 IREDFSRTLAERLVADIEKVLHELDSLTAKIKMLSGTSSVTVHEVVKDNGQVVVAKKSAL 480
Query: 477 EMQEEVTQYWKKLV------EGKRVGVC 498
E Q E+T WKK V K GVC
Sbjct: 481 ETQREITAIWKKFVLDRKKLNDKMNGVC 508
>IMGA|Medtr5g084950.1 Glutamate decarboxylase;
chr05_pseudomolecule_IMGAG_V3 32390561-32395009 E
EGN_Mt090430 20090702
Length = 351
Score = 556 bits (1432), Expect = e-158, Method: Compositional matrix adjust.
Identities = 261/325 (80%), Positives = 283/325 (87%)
Query: 1 MVITTTIVDSDELLHSTFASRYVRAPVPRFKIAEKSMPKEAAYQVINDELMLDGNPRLNL 60
MV++ T D +HSTFASRYVR +PRFK+ E S+PKEAAYQ+INDELMLDGNPRLNL
Sbjct: 1 MVLSETATHMDASVHSTFASRYVRTSLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNL 60
Query: 61 ASFVTTWMEPECNDLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPAGEDETAVG 120
ASFVTTWMEPEC+ LIMASINKNYVDMDEYPVTTELQNRCVNMIAHLF+AP + E AVG
Sbjct: 61 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDSEPAVG 120
Query: 121 VGTVGSSEAIMLSGLAFKRKWQNKRKAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
VGTVGSSEAIML+GLAFKRKWQN+RK++GK + PNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNRRKSEGKSCENPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 181 VKLTEGNYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVXXXXXXXXXXXXXTGWDTP 240
VKL +G YVMDP KA EMVDENTICVAAILGSTL GEFEDV TGWDTP
Sbjct: 181 VKLRDGYYVMDPEKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNAETGWDTP 240
Query: 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKEDLPEEL 300
IHVDAASGGFIAPFLYP+L WDFRL LVKSINVSGHKYGLVYAG+GW +WR+KEDLPEEL
Sbjct: 241 IHVDAASGGFIAPFLYPELVWDFRLSLVKSINVSGHKYGLVYAGIGWIIWRSKEDLPEEL 300
Query: 301 IFHINYLGSDQPTFTLNFSKGSSQI 325
IFHINYLG+DQPTFTLNFSKG +I
Sbjct: 301 IFHINYLGADQPTFTLNFSKGKHRI 325
>IMGA|Medtr5g084960.1 Glutamate decarboxylase
chr05_pseudomolecule_IMGAG_V3 32395011-32395905 E
EGN_Mt090430 20090702
Length = 171
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 120/170 (70%), Gaps = 6/170 (3%)
Query: 335 LGFEGYKKIIENCMENTMLLKKGIEKTDRFDIVSKDIGVPLVAFSLKDSSKYTVFEVSEN 394
L ++GY+ ++ENC +N M+LK G+EKT+RF+IVSKD GVPLVAF+LKD + + F++S+
Sbjct: 2 LTWQGYRNVMENCRDNMMVLKDGLEKTERFEIVSKDEGVPLVAFTLKDHNNFNEFQISDM 61
Query: 395 LRRFGWIIPAYTMPADAEHIAVLRVVVREDLSRSLAERLVSHIGQVLKEMDLLPVH-ISS 453
L+R GWIIPAYTMP DAEH+ VLRVV+RED SR+ AERLV I +V+ E+DL+P +S+
Sbjct: 62 LKRHGWIIPAYTMPPDAEHVTVLRVVIREDFSRTFAERLVIDITRVIHELDLVPSRVVST 121
Query: 454 QTAIVNKTLQDSEGK---KIVKKSEREMQEEVTQYWKKLVEGKRV--GVC 498
T V +D++ I +S E Q ++T WKK V ++ GVC
Sbjct: 122 NTITVTGGEEDADNDGTVTIANQSVLETQRKITTAWKKFVMNRKKTNGVC 171
>IMGA|Medtr7g022250.1 Pyridoxal-dependent decarboxylase;
chr07_pseudomolecule_IMGAG_V3 5518776-5527735 E
EGN_Mt090430 20090702
Length = 541
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 157/360 (43%), Gaps = 24/360 (6%)
Query: 81 NKNYVDMDEYPVTTELQNRCVNMIAHLFHAPAGEDETAV-GVGTVGSSEAIMLSGLAFKR 139
+ N + +D + + V M A L + + G T G +E+I+L+ + R
Sbjct: 157 HTNPLHLDVFQSVVRFEAEVVAMTAALLGSKEKTSGGQICGNMTSGGTESILLA-VKSSR 215
Query: 140 KWQNKRKAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGNYVMDPVKAVEMV 199
+ +K KP ++ + ++K A+YF ++L V + + N+ D +
Sbjct: 216 DYMKSKKG----ITKPEMIIPESGHSAYDKAAQYFNIKLWRVPVDK-NFQADVKATRRYI 270
Query: 200 DENTICVAAILGSTLTGEFEDVXXXXXXXXXXXXXTGWDTPIHVDAASGGFIAPFL---- 255
++NTI + G + + + +D HVD GGF+ PF
Sbjct: 271 NKNTIMLVGSSPGFPHGIIDPIKELGQLA------SNFDICFHVDLCLGGFVLPFARELG 324
Query: 256 YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKEDLPEELIFHINYLGSDQPTFT 315
YP +DF + V SI+V HKYGL G ++R + + + + G + T
Sbjct: 325 YPIQPYDFTVKGVTSISVDVHKYGLAPKGTSIVLYRNHDIRKHQFVAVTEWSGGLYVSPT 384
Query: 316 LNFSKGSSQIIAQYYQFIRLGFEGYKKIIENCMENTMLLKKGIEKTDRFDIVSKDIGVPL 375
+ S+ S I + I LG EGY + + ME + L+KGIE+ ++ + + +
Sbjct: 385 IAGSRPGSLIAGAWAAMISLGKEGYLENTKAIMEGSKKLQKGIEEIPELFVIGRP-DMTI 443
Query: 376 VAFSLKDSSKYTVFEVSENLRRFGWIIPAYTMPADAEHIAVL--RVVVREDLSRSLAERL 433
VAF S+ +FEV++ + GW + A P ++ HI V V V ED R L E +
Sbjct: 444 VAFG---SNVLDIFEVNDMMSSKGWHLNALQRP-NSIHICVTLQHVPVIEDFLRDLNESV 499
>IMGA|Medtr5g083650.1 Pyridoxal-dependent decarboxylase; Thioredoxin
domain 2 chr05_pseudomolecule_IMGAG_V3 31752615-31753412
H EGN_Mt090430 20090702
Length = 111
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKE 294
+ F Y LEWDFRLPLVKSINVSGHKYGL Y G+GW +W ++
Sbjct: 15 SSFPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIWCSRR 57
>IMGA|Medtr5g083680.1 Glutamate decarboxylase 2, putative
chr05_pseudomolecule_IMGAG_V3 31761731-31762087 H
EGN_Mt090430 20090702
Length = 118
Score = 65.5 bits (158), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 372 GVPLVAFSLKDSSKYTVFEVSENLRRFGWIIPAYTMPADAEHIAVLRVVVREDLSRSLAE 431
GV ++AFS K Y + +S+ LR +GWI+ AY M A+HI VLR V+R S +L E
Sbjct: 19 GVSVMAFSHKHRRIYNEYTISKMLRHYGWIVLAYQMFLGAQHIIVLRAVIRARFSCALVE 78
Query: 432 RLVSHIGQVLKEM 444
RLV +I V +E+
Sbjct: 79 RLVLNIKIVFREL 91
>IMGA|Medtr5g083620.1 Glutamate decarboxylase
chr05_pseudomolecule_IMGAG_V3 31746151-31746542 H
EGN_Mt090430 20090702
Length = 74
Score = 59.3 bits (142), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKEDL 296
I F Y L+ DFRL LVKSINVSGHK LVY+G+GW +W ++ +
Sbjct: 27 ILSFPYKMLQRDFRLSLVKSINVSGHKNDLVYSGIGWIIWCSRRGI 72
>IMGA|Medtr2g008250.1 Pyridoxal-dependent decarboxylase;
chr02_pseudomolecule_IMGAG_V3 1485157-1479953 E
EGN_Mt090430 20090702
Length = 486
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 169 KFARYFEVELKEVK-LTEGNYVMDPVKAVEMVDENTICVAAI-LGSTLTGEFEDVXXXXX 226
K AR + +E ++V+ L G D KA + ++ + + +G+T+ G +D+
Sbjct: 209 KAARMYRMECEKVETLNSGEIDCDDFKAKLLRHQDKPAIINVNIGTTVKGAVDDLDLVIQ 268
Query: 227 XXXXXXXXTGWDTP---IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA 283
G+ IHVD A G + PF+ + F+ P + S++VSGHK+ V
Sbjct: 269 KLEE----AGFSQDRFYIHVDGALFGLMMPFVKRAPKVTFKKP-IGSVSVSGHKF--VGC 321
Query: 284 GVGWAVWRTKEDLPEELIFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKKI 343
+ V T+ + L ++ YL S T S+ I +Y R G+ G++K
Sbjct: 322 PMPCGVQITRLEHINALSRNVEYLASRDATIM--GSRNGHAPIFLWYTLNRKGYRGFQKE 379
Query: 344 IENCMENTMLLK 355
++ C+ N K
Sbjct: 380 VQKCLRNAHYFK 391