Jatropha Genome Database

JcCA0150341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0150341.10 + phase: 0 /partial
         (112 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g088580.1 Strictosidine synthase; TolB, C-terminal ch...   129   3e-31
IMGA|Medtr8g088510.1 Strictosidine synthase; TolB, C-terminal ch...   122   5e-29
IMGA|Medtr8g088630.1 Strictosidine synthase; TolB, C-terminal ch...   115   8e-27
IMGA|Medtr8g088650.1 hypothetical protein chr08_pseudomolecule_I...    81   2e-16

>IMGA|Medtr8g088580.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 18789030-18787020 E
           EGN_Mt090430 20090702
          Length = 279

 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 60/109 (55%), Positives = 80/109 (73%), Gaps = 2/109 (1%)

Query: 1   MPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGIVSKHIRNIGDTGKNGGVFVV 60
           MPDNIHYDG G +WI +    +     +FKYPF+RK+  I+ K + ++ +  KNGGV +V
Sbjct: 170 MPDNIHYDGQGQYWIGIATAFSPELDLIFKYPFIRKVLAIIIKKVLSL-NFSKNGGVIIV 228

Query: 61  DLEGKLISHYYDPELKLISSGVKIGNHLYCGSIIDPYILRLNLAKYPAL 109
           DLEGK  +HYYDP+L L + G+KIGNHLYCGSI+ P+I RL++ KYPAL
Sbjct: 229 DLEGKPTTHYYDPKLSL-TGGIKIGNHLYCGSILYPFITRLDIEKYPAL 276


>IMGA|Medtr8g088510.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 18777233-18774677 E
           EGN_Mt090430 20090702
          Length = 375

 Score =  122 bits (306), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 2/109 (1%)

Query: 1   MPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGIVSKHIRNIGDTGKNGGVFVV 60
           MPDNI YDGHG + I +    +     + KYPF+RK   I++K + ++ +  KNGGV  V
Sbjct: 266 MPDNIRYDGHGQYLIGIATAFSLDLDIMLKYPFIRKALAIITKKVPSL-NLYKNGGVITV 324

Query: 61  DLEGKLISHYYDPELKLISSGVKIGNHLYCGSIIDPYILRLNLAKYPAL 109
           DLEGK  +HYYDP+L L S G+KIGNHLYCGSI+ P+++RL++ KYPAL
Sbjct: 325 DLEGKSTAHYYDPKLSL-SGGIKIGNHLYCGSILYPFVIRLDIEKYPAL 372


>IMGA|Medtr8g088630.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 18812317-18808704 E
           EGN_Mt090430 20090702
          Length = 375

 Score =  115 bits (287), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 75/109 (68%), Gaps = 2/109 (1%)

Query: 1   MPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGIVSKHIRNIGDTGKNGGVFVV 60
           MPDNIHYDG G +WI +    +     + KYPF+RK   I+ K + ++  T KNGG+  V
Sbjct: 266 MPDNIHYDGQGQYWIGIATAFSPELDIMLKYPFIRKALAIIIKKVSSLNLT-KNGGLISV 324

Query: 61  DLEGKLISHYYDPELKLISSGVKIGNHLYCGSIIDPYILRLNLAKYPAL 109
           DLEGK  +HY DP+L L + G+KIG HLY GSI+ P+++RL++ KYPAL
Sbjct: 325 DLEGKPTTHYNDPKLSL-TGGIKIGKHLYGGSILYPFVIRLDIEKYPAL 372


>IMGA|Medtr8g088650.1 hypothetical protein
          chr08_pseudomolecule_IMGAG_V3 18823820-18816313 E
          EGN_Mt090430 20090702
          Length = 73

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 13/86 (15%)

Query: 1  MPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGIVSKHIRNIGDTGKNGGVFVV 60
          MPDN+HY             IT+ W+ + +YPF+RK   +V+KH R     G NGGV VV
Sbjct: 1  MPDNVHY------------SITSQWELLLRYPFLRKTVAMVTKHFRR-PKLGINGGVIVV 47

Query: 61 DLEGKLISHYYDPELKLISSGVKIGN 86
          DL GK+  HYYD +L LISSG+K+ N
Sbjct: 48 DLAGKVTDHYYDLQLSLISSGIKVDN 73