Jatropha Genome Database

JcCA0150301.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0150301.20 + phase: 0 
         (479 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g109110.1 Carbohydrate kinase, PfkB; Acyl-CoA dehydro...   699   0.0  
IMGA|Medtr8g105410.1 Acyl-CoA dehydrogenase C-terminal-like; chr...   197   8e-51
IMGA|Medtr5g013010.1 Acyl-CoA dehydrogenase, middle and N-termin...   126   2e-29
IMGA|Medtr5g013000.1 Acyl-CoA dehydrogenase C-terminal-like chr0...    84   2e-16

>IMGA|Medtr4g109110.1 Carbohydrate kinase, PfkB; Acyl-CoA
           dehydrogenase C-terminal-like;
           chr04_pseudomolecule_IMGAG_V3 24329162-24322582 E
           EGN_Mt090430 20090702
          Length = 678

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/472 (71%), Positives = 386/472 (81%), Gaps = 14/472 (2%)

Query: 13  RTRILTNHXXXXXXXXXXXXXXNACVSYSPPELHER--CDFDPNEMRKLLDMHNIDDRDW 70
           RT ILTNH              +AC+S+SPPEL E     FD  EMRKLLD HN++DRDW
Sbjct: 9   RTTILTNHLRHDPPTAPTILHNHACLSHSPPELSESNPTTFDTFEMRKLLDGHNLEDRDW 68

Query: 71  LFGLMRQSKVFNPREKGGRVYVAPDYNQSMEQQREITMRRVAYLLERGVFDGWLTGKGLE 130
           LFGLM QS +FN RE  GRV+V PDYNQSMEQQRE+TM+R+AYLL+RGVF GWLTG G +
Sbjct: 69  LFGLMIQSGLFNRREVDGRVFVNPDYNQSMEQQREMTMKRIAYLLDRGVFRGWLTGDGPQ 128

Query: 131 SEMKKWPCLKLLACLITPSLLNSVFTSFY-----------ERHHDKWLRDTETYAIKGCF 179
            E++K    +++  +   SL   +    +           +RHHDKWLR TE Y IKGCF
Sbjct: 129 EELRKLALHEVIG-MYDHSLAVKLGVHIFLWGGAVKFLGTKRHHDKWLRATENYDIKGCF 187

Query: 180 AMTELGHGSNVRGIETVTIYDSNTGEFVINTPCESAQKYWIGGAANHATHTIVFSQLNIN 239
           AM+ELGHGSNVRGIETVT YD  +GEFVINTPCESAQKYWIGGAANHATHTIVFSQLNIN
Sbjct: 188 AMSELGHGSNVRGIETVTTYDPISGEFVINTPCESAQKYWIGGAANHATHTIVFSQLNIN 247

Query: 240 GMSEGVHAFIAQIRDADGNIWPNIRIADCGHKIGLNGVDNGRIWFDNVRIPRENLLNSVA 299
           G ++GVHAFIAQIRD+DGNI PNIRIA+CGHKIGLNGVDNGRIWFDNVRIPRENLLNS+A
Sbjct: 248 GSNQGVHAFIAQIRDSDGNICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSMA 307

Query: 300 DVSPDGQYLSAIKDADQRFAAFLAPLTSGRVTIAVSAIYSSKIGLATAIRYSLSRQAFSV 359
           DVSP G+YLSAIK+ DQRFAAFLAPLTSGRVTIAVS++Y SKI LA AIRY+L+R+AFS+
Sbjct: 308 DVSPSGEYLSAIKNTDQRFAAFLAPLTSGRVTIAVSSVYISKISLAIAIRYALTRRAFSI 367

Query: 360 TPNGPEVLLLDYPSHQRRLLPLLAKTYAMSFAGNYLKMIYWNRTPETNKTLHVVSSAFKA 419
           TPNGPEVLLLDYPSHQ+RLLPLLAK YAMSF+   LK +Y NRTPE+NK +H+VSSA+KA
Sbjct: 368 TPNGPEVLLLDYPSHQQRLLPLLAKIYAMSFSAIELKKLYVNRTPESNKAIHIVSSAYKA 427

Query: 420 TLTWHDMRTLQECREACGGQGLKTENRVGHLKSEFDVQSTFEGDNNVLMQQV 471
           T TW++MRTLQECREACGGQG+KTENR+G  K E+DV STFEGDNNVLMQQ+
Sbjct: 428 TFTWNNMRTLQECREACGGQGVKTENRIGQFKGEYDVHSTFEGDNNVLMQQI 479


>IMGA|Medtr8g105410.1 Acyl-CoA dehydrogenase C-terminal-like;
           chr08_pseudomolecule_IMGAG_V3 23279785-23286851 E
           EGN_Mt090430 20090702
          Length = 664

 Score =  197 bits (502), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 114/327 (34%), Positives = 170/327 (51%), Gaps = 23/327 (7%)

Query: 160 ERHHDKWLRDTETYAIKGCFAMTELGHGSNVRGIETVTIYDSNTGEFVINTPCESAQKYW 219
           E    KWL   +   I GC+A TELGHGSNV+G+ET   +D  T EFVI++P  ++ K+W
Sbjct: 116 EEQQQKWLPLAQRMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWW 175

Query: 220 IGGAANHATHTIVFSQLNINGMSEGVHAFIAQIRDADGNI-WPNIRIADCGHKIG---LN 275
            GG    +TH +V+++L  +G   GVH FI Q+R  D ++  P I + D G K G    N
Sbjct: 176 PGGLGKVSTHAVVYARLITDGRDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYN 235

Query: 276 GVDNGRIWFDNVRIPRENLLNSVADVSPDGQYLSAIKDADQRFAAFLAPLTSGRVTIAVS 335
            +DNG + F++VRIPR+ +L  V+ V+ +G+Y+ +       +      +   R TI   
Sbjct: 236 TMDNGVLRFEHVRIPRDQMLMRVSQVTREGKYVQSNVPRQLVYGT----MVYVRQTIVSD 291

Query: 336 AIYSSKIGLATAIRYSLSRQAFSVTPNGPEVLLLDYPSHQRRLLPLLAKTYAMSFAGNYL 395
           A  +    +  A RYS  R+ F       E  ++DY + Q RL PLLA  YA  F G +L
Sbjct: 292 ASTAMSRAVCIAARYSAVRRQFGGNNGSLESQVIDYKTQQARLFPLLASAYAFRFVGEWL 351

Query: 396 KMIY-----------WNRTPETNKTLHVVSSAFKATLTWHDMRTLQECREACGGQGLKTE 444
           K +Y           ++  PE     H  ++  K+  T      ++ECR+ CGG G    
Sbjct: 352 KWLYTDVMKRLQANDFSTLPEA----HACTAGLKSLTTSATSDGIEECRKLCGGHGYLCS 407

Query: 445 NRVGHLKSEFDVQSTFEGDNNVLMQQV 471
           + +  L + +    T+EGDN VL+ QV
Sbjct: 408 SGLPELFAVYVPTCTYEGDNIVLLLQV 434


>IMGA|Medtr5g013010.1 Acyl-CoA dehydrogenase, middle and N-terminal
           chr05_pseudomolecule_IMGAG_V3 3873686-3870432 F
           EGN_Mt090430 20090702
          Length = 257

 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 4/140 (2%)

Query: 160 ERHHDKWLRDTETYAIKGCFAMTELGHGSNVRGIETVTIYDSNTGEFVINTPCESAQKYW 219
           +   +KWL       I GC+A TELGHGSNV+G+ET   +D  T EF+I++P  ++ K+W
Sbjct: 116 DEQQEKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFIIHSPTLTSSKWW 175

Query: 220 IGGAANHATHTIVFSQLNINGMSEGVHAFIAQIRDADGNI-WPNIRIADCGHKIG---LN 275
            GG    +TH IV+++L   G  +GVH FI Q+R  D ++  P I + D G K G    N
Sbjct: 176 PGGLGKISTHAIVYARLITEGQDQGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNAAYN 235

Query: 276 GVDNGRIWFDNVRIPRENLL 295
            +DNG + FD+VRIPR  +L
Sbjct: 236 TMDNGVLRFDHVRIPRNQML 255


>IMGA|Medtr5g013000.1 Acyl-CoA dehydrogenase C-terminal-like
           chr05_pseudomolecule_IMGAG_V3 3870425-3866998 E
           EGN_Mt090430 20090702
          Length = 384

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 7/150 (4%)

Query: 329 RVTIAVSAIYSSKIGLATAIRYSLSRQAFSVTPNGPEVLLLDYPSHQRRLLPLLAKTYAM 388
           R  I   A  +    +  A RYS  R+ F     GPE  ++DY + Q RL PLLA  YA 
Sbjct: 5   RQAIVADASTALSRAVCIATRYSAVRRQFGSQKGGPETQVIDYKTQQARLFPLLASAYAF 64

Query: 389 SFAGNYLKMIYWNRTP-------ETNKTLHVVSSAFKATLTWHDMRTLQECREACGGQGL 441
            F   +LK +Y + T         T    H  ++  K+  T      ++ECR+ CGG G 
Sbjct: 65  RFVSEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTSATADGIEECRKLCGGHGY 124

Query: 442 KTENRVGHLKSEFDVQSTFEGDNNVLMQQV 471
              + +  L + +    T+EGDN VL+ QV
Sbjct: 125 LCSSGLPELFAVYVPACTYEGDNTVLLLQV 154